; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi06G008950 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G008950
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr06:18549948..18555263
RNA-Seq ExpressionLsi06G008950
SyntenyLsi06G008950
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4362963.1 hypothetical protein F8388_020479 [Cannabis sativa]6.5e-0431.37Show/hide
Query:  KQIERNPNLLRSRPTAFTHWALVETLRRVLSGDQPNLENQILIGGPNTSNRPPLEQSTNTNPVKIVDPTLCNLTGDNPRKGSDIVVWWKSELAGITKVQR
        +++++   LL SR  + T   L++ L RVL  +  +LE+QI+  G          +S N+NP+++ D TL ++TG+N   G  +V+  +S+LA  ++V  
Subjt:  KQIERNPNLLRSRPTAFTHWALVETLRRVLSGDQPNLENQILIGGPNTSNRPPLEQSTNTNPVKIVDPTLCNLTGDNPRKGSDIVVWWKSELAGITKVQR

Query:  EV
        E+
Subjt:  EV

KAF5934734.1 hypothetical protein HYC85_025863 [Camellia sinensis]3.4e-1339.1Show/hide
Query:  FTGDKQIERNPNLLRSRPT--AFTHWALVETLRRVLSGDQPNLENQILIGGPNTSNRPPLEQSTNTNPVKIVDPTLCNLTGDNPRKGSDIVVWWKSELAG
        ++G ++ E   ++ RSR +  A     LVE +  VLSGD  +LE+QI+  G ++ + PPLE+S N N V + D    +L GD    G ++VV  + +LA 
Subjt:  FTGDKQIERNPNLLRSRPT--AFTHWALVETLRRVLSGDQPNLENQILIGGPNTSNRPPLEQSTNTNPVKIVDPTLCNLTGDNPRKGSDIVVWWKSELAG

Query:  ITKVQREVTRGLVDGVGRDGGGEKTEGKSVIGE
        + +V  EV  G VDGV  D GGE+ +G++V+GE
Subjt:  ITKVQREVTRGLVDGVGRDGGGEKTEGKSVIGE

KAG2396884.1 uncharacterized protein HKW66_Vig0231600 [Vigna angularis]6.3e-0734.65Show/hide
Query:  ALVETLRRVLSGDQPNLENQILIGGPNTSNRPPLEQSTNTNPVKIVDPTLCNLTGDNPRKGSDIVVWWKSELAGITKVQREVTRGLVDGVGRDGGGEKTE
        A++E LR +L     +LE+ I++GG ++ +RPPLE+  N N VK  +  L +   D    G ++VV  + + A  T++  ++  G V G+ +DGGG K  
Subjt:  ALVETLRRVLSGDQPNLENQILIGGPNTSNRPPLEQSTNTNPVKIVDPTLCNLTGDNPRKGSDIVVWWKSELAGITKVQREVTRGLVDGVGRDGGGEKTE

Query:  G
        G
Subjt:  G

RXI05933.1 hypothetical protein DVH24_017975 [Malus domestica]1.6e-0736Show/hide
Query:  AFTHWALVETLRRVLSGDQPNLENQILIGGPNTSNRPPLEQSTNTNPVKIVDPTLCNLTGDNPRKGSDIVVWWKSELAGITKVQREVTRGLVDGVGRDGG
        A    AL E L  VL GD+ +LE+Q++   P++ +    E+  + + V + D    +L+GD  R G   VV  + +LA   +V  EV  G VDGV  DGG
Subjt:  AFTHWALVETLRRVLSGDQPNLENQILIGGPNTSNRPPLEQSTNTNPVKIVDPTLCNLTGDNPRKGSDIVVWWKSELAGITKVQREVTRGLVDGVGRDGG

Query:  GEKTEGKSVIGEASSLTSRSR-WLR
        GE+++ ++V+GE S     +R W+R
Subjt:  GEKTEGKSVIGEASSLTSRSR-WLR

TrEMBL top hitse value%identityAlignment
A0A0S3R029 Uncharacterized protein5.4e-0429.7Show/hide
Query:  ALVETLRRVLSGDQPNLENQILIGGPNTSNRPPLEQSTNTNPVKIVDPTLCNLTGDNPRKGSDIVVWWKSELAGITKVQREVTRGLVDGVGRDGGGEKTE
        A+++ L+ +      +LE+ I++GG ++ +RPPLE+  N N VK  +  L +   +    G + VV  + + A  T++  ++    V G+ +DGGG K  
Subjt:  ALVETLRRVLSGDQPNLENQILIGGPNTSNRPPLEQSTNTNPVKIVDPTLCNLTGDNPRKGSDIVVWWKSELAGITKVQREVTRGLVDGVGRDGGGEKTE

Query:  G
        G
Subjt:  G

A0A498KKR8 Uncharacterized protein8.0e-0836Show/hide
Query:  AFTHWALVETLRRVLSGDQPNLENQILIGGPNTSNRPPLEQSTNTNPVKIVDPTLCNLTGDNPRKGSDIVVWWKSELAGITKVQREVTRGLVDGVGRDGG
        A    AL E L  VL GD+ +LE+Q++   P++ +    E+  + + V + D    +L+GD  R G   VV  + +LA   +V  EV  G VDGV  DGG
Subjt:  AFTHWALVETLRRVLSGDQPNLENQILIGGPNTSNRPPLEQSTNTNPVKIVDPTLCNLTGDNPRKGSDIVVWWKSELAGITKVQREVTRGLVDGVGRDGG

Query:  GEKTEGKSVIGEASSLTSRSR-WLR
        GE+++ ++V+GE S     +R W+R
Subjt:  GEKTEGKSVIGEASSLTSRSR-WLR

A0A7J6E0U2 Uncharacterized protein5.4e-0431.37Show/hide
Query:  KQIERNPNLLRSRPTAFTHWALVETLRRVLSGDQPNLENQILIGGPNTSNRPPLEQSTNTNPVKIVDPTLCNLTGDNPRKGSDIVVWWKSELAGITKVQR
        +++++   LL SR  + T   L++ L RVL  +  +LE+QI+  G          +S N+NP+++ D TL ++TG+N   G  +V+  +S+LA  ++V  
Subjt:  KQIERNPNLLRSRPTAFTHWALVETLRRVLSGDQPNLENQILIGGPNTSNRPPLEQSTNTNPVKIVDPTLCNLTGDNPRKGSDIVVWWKSELAGITKVQR

Query:  EV
        E+
Subjt:  EV

A0A7J6EX01 Uncharacterized protein3.1e-0431.37Show/hide
Query:  KQIERNPNLLRSRPTAFTHWALVETLRRVLSGDQPNLENQILIGGPNTSNRPPLEQSTNTNPVKIVDPTLCNLTGDNPRKGSDIVVWWKSELAGITKVQR
        +++++   LL SR  + T   L++ L RVL  +  +LE+QI+  G          +S N+NP+++ D TL ++TG+N   G  +V+  +S+LA  ++V  
Subjt:  KQIERNPNLLRSRPTAFTHWALVETLRRVLSGDQPNLENQILIGGPNTSNRPPLEQSTNTNPVKIVDPTLCNLTGDNPRKGSDIVVWWKSELAGITKVQR

Query:  EV
        E+
Subjt:  EV

A0A7J7G5W4 Uncharacterized protein1.7e-1339.1Show/hide
Query:  FTGDKQIERNPNLLRSRPT--AFTHWALVETLRRVLSGDQPNLENQILIGGPNTSNRPPLEQSTNTNPVKIVDPTLCNLTGDNPRKGSDIVVWWKSELAG
        ++G ++ E   ++ RSR +  A     LVE +  VLSGD  +LE+QI+  G ++ + PPLE+S N N V + D    +L GD    G ++VV  + +LA 
Subjt:  FTGDKQIERNPNLLRSRPT--AFTHWALVETLRRVLSGDQPNLENQILIGGPNTSNRPPLEQSTNTNPVKIVDPTLCNLTGDNPRKGSDIVVWWKSELAG

Query:  ITKVQREVTRGLVDGVGRDGGGEKTEGKSVIGE
        + +V  EV  G VDGV  D GGE+ +G++V+GE
Subjt:  ITKVQREVTRGLVDGVGRDGGGEKTEGKSVIGE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAATTCCTTGATTATTTCAGCTTACTAGCAAACAAAAGCCGTTTGAAATTCACTGGTGACAAGCAAATTGAAAGAAACCCGAACCTCTTACGAAGCAGACCGACGGC
CTTCACACACTGGGCTCTCGTTGAAACTCTTAGACGGGTACTTAGCGGTGATCAACCCAACCTCGAAAACCAAATCCTCATCGGTGGACCTAATACCAGTAATCGACCAC
CACTGGAACAAAGCACGAACACGAATCCCGTCAAGATTGTGGATCCGACCCTTTGCAATCTTACCGGTGACAACCCTAGAAAAGGAAGCGACATAGTTGTCTGGTGGAAG
AGTGAACTTGCAGGAATCACCAAGGTCCAAAGAGAAGTCACCAGAGGTCTCGTTGATGGAGTAGGTCGCGACGGAGGAGGGGAGAAGACCGAAGGGAAATCCGTAATCGG
CGAGGCGAGCTCATTGACTAGTCGTTCGAGATGGCTACGTAACTGTTTTCTTTTCCACAAAGGAAATCCTCCTGATGAGGCGATGAAATACTTTGACCTGGTAAACGACG
TCGTGGCATTGGGTAGACCTAAAGAAAAGCCCAAGCCTAAGAGTGTGCCCAGGCCTAAGGAGTTTGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAATTCCTTGATTATTTCAGCTTACTAGCAAACAAAAGCCGTTTGAAATTCACTGGTGACAAGCAAATTGAAAGAAACCCGAACCTCTTACGAAGCAGACCGACGGC
CTTCACACACTGGGCTCTCGTTGAAACTCTTAGACGGGTACTTAGCGGTGATCAACCCAACCTCGAAAACCAAATCCTCATCGGTGGACCTAATACCAGTAATCGACCAC
CACTGGAACAAAGCACGAACACGAATCCCGTCAAGATTGTGGATCCGACCCTTTGCAATCTTACCGGTGACAACCCTAGAAAAGGAAGCGACATAGTTGTCTGGTGGAAG
AGTGAACTTGCAGGAATCACCAAGGTCCAAAGAGAAGTCACCAGAGGTCTCGTTGATGGAGTAGGTCGCGACGGAGGAGGGGAGAAGACCGAAGGGAAATCCGTAATCGG
CGAGGCGAGCTCATTGACTAGTCGTTCGAGATGGCTACGTAACTGTTTTCTTTTCCACAAAGGAAATCCTCCTGATGAGGCGATGAAATACTTTGACCTGGTAAACGACG
TCGTGGCATTGGGTAGACCTAAAGAAAAGCCCAAGCCTAAGAGTGTGCCCAGGCCTAAGGAGTTTGTGTAG
Protein sequenceShow/hide protein sequence
MQFLDYFSLLANKSRLKFTGDKQIERNPNLLRSRPTAFTHWALVETLRRVLSGDQPNLENQILIGGPNTSNRPPLEQSTNTNPVKIVDPTLCNLTGDNPRKGSDIVVWWK
SELAGITKVQREVTRGLVDGVGRDGGGEKTEGKSVIGEASSLTSRSRWLRNCFLFHKGNPPDEAMKYFDLVNDVVALGRPKEKPKPKSVPRPKEFV