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Lsi06G009340 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G009340
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr06:19246080..19246466
RNA-Seq ExpressionLsi06G009340
SyntenyLsi06G009340
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589876.1 hypothetical protein SDJN03_15299, partial [Cucurbita argyrosperma subsp. sororia]9.5e-4676.74Show/hide
Query:  MATNLLTFSPAGIRACAASADRRSEHNRRKT-ASSSSSNWWAPVFGWSSEPDYIDSGSKAETRDLASGTSKSDPETKSMRARFSPGCFTEAKARRLRMMT
        MAT+L TF+P  IRACA+SAD    HNRRKT +SSSSSNWWAPVFGWSSEPDYIDSG+K+  ++LA G SKSDPETKS R RFSPGCFTE+KAR+LR+MT
Subjt:  MATNLLTFSPAGIRACAASADRRSEHNRRKT-ASSSSSNWWAPVFGWSSEPDYIDSGSKAETRDLASGTSKSDPETKSMRARFSPGCFTEAKARRLRMMT

Query:  TETETFHDVMYHSAIASRLASDFKTRTDS
         ETE+FHDVMYHSAIASRLA+DFK+R DS
Subjt:  TETETFHDVMYHSAIASRLASDFKTRTDS

XP_011656185.1 uncharacterized protein LOC105435656 [Cucumis sativus]2.0e-5184.38Show/hide
Query:  MATNLLTFSPAGIRACAASADRRSEHNRRKTASSSSSNWWAPVFGWSSEPDYIDSGSKAETRDLASGTSKSDPETKSMRARFSPGCFTEAKARRLRMMTT
        MATNLLTF PAGIRACA+SADRRS+H+RRKT  SSSSNWWAPVFGWSSEPDYIDSG+KAE ++LA G+SK D ETKS+R RFSPGCFTEAKAR+LRMMTT
Subjt:  MATNLLTFSPAGIRACAASADRRSEHNRRKTASSSSSNWWAPVFGWSSEPDYIDSGSKAETRDLASGTSKSDPETKSMRARFSPGCFTEAKARRLRMMTT

Query:  ETETFHDVMYHSAIASRLASDFKTRTDS
        ETE+FHDVMYHSAIASRLASDFK+R DS
Subjt:  ETETFHDVMYHSAIASRLASDFKTRTDS

XP_016903293.1 PREDICTED: uncharacterized protein LOC103502747 [Cucumis melo]2.9e-4781.4Show/hide
Query:  MATNLLTFSPAGIRACAASADRRSEHNRRKTASSSSSNWWAPVFGWSSEPDYIDS-GSKAETRDLASGTSKSDPETKSMRARFSPGCFTEAKARRLRMMT
        MATNLLTF+PAGIRACAASADRRS+ NRRK  +SSS+NWWAPVFGWSSEPDYIDS  +KAE ++LA   SK D ETKS+R RFSPGCFTEAKAR+LRMMT
Subjt:  MATNLLTFSPAGIRACAASADRRSEHNRRKTASSSSSNWWAPVFGWSSEPDYIDS-GSKAETRDLASGTSKSDPETKSMRARFSPGCFTEAKARRLRMMT

Query:  TETETFHDVMYHSAIASRLASDFKTRTDS
        TETE+FHDVMYHSAIASRLASDFK+R DS
Subjt:  TETETFHDVMYHSAIASRLASDFKTRTDS

XP_022960569.1 uncharacterized protein LOC111461308 [Cucurbita moschata]1.6e-4576.15Show/hide
Query:  MATNLLTFSPAGIRACAASADRRSEHNRRK--TASSSSSNWWAPVFGWSSEPDYIDSGSKAETRDLASGTSKSDPETKSMRARFSPGCFTEAKARRLRMM
        MATNL TF+P  IRACA+SAD    HNRRK  ++SSSSSNWWAPVFGWSSEPDYIDSG+K+  ++LA G SKSDPETKS R RFSPGCFTE+KAR+LR+M
Subjt:  MATNLLTFSPAGIRACAASADRRSEHNRRK--TASSSSSNWWAPVFGWSSEPDYIDSGSKAETRDLASGTSKSDPETKSMRARFSPGCFTEAKARRLRMM

Query:  TTETETFHDVMYHSAIASRLASDFKTRTDS
        T ETE+FHDVMYHSAIASRLA+DFK+R DS
Subjt:  TTETETFHDVMYHSAIASRLASDFKTRTDS

XP_038880363.1 uncharacterized protein LOC120072011 [Benincasa hispida]8.6e-5589.06Show/hide
Query:  MATNLLTFSPAGIRACAASADRRSEHNRRKTASSSSSNWWAPVFGWSSEPDYIDSGSKAETRDLASGTSKSDPETKSMRARFSPGCFTEAKARRLRMMTT
        MATNLLTF PAGIRACAASADRRS+HNRRKT  SSSSNWWAPVFGWSSEPDYIDS +KAE +DLA G SKSDPETKS+RARFSPGCFTEAKAR+LRMMTT
Subjt:  MATNLLTFSPAGIRACAASADRRSEHNRRKTASSSSSNWWAPVFGWSSEPDYIDSGSKAETRDLASGTSKSDPETKSMRARFSPGCFTEAKARRLRMMTT

Query:  ETETFHDVMYHSAIASRLASDFKTRTDS
        ETE+FHDVMYHSAIASRLASDFKTR DS
Subjt:  ETETFHDVMYHSAIASRLASDFKTRTDS

TrEMBL top hitse value%identityAlignment
A0A0A0LTN7 Uncharacterized protein9.6e-5284.38Show/hide
Query:  MATNLLTFSPAGIRACAASADRRSEHNRRKTASSSSSNWWAPVFGWSSEPDYIDSGSKAETRDLASGTSKSDPETKSMRARFSPGCFTEAKARRLRMMTT
        MATNLLTF PAGIRACA+SADRRS+H+RRKT  SSSSNWWAPVFGWSSEPDYIDSG+KAE ++LA G+SK D ETKS+R RFSPGCFTEAKAR+LRMMTT
Subjt:  MATNLLTFSPAGIRACAASADRRSEHNRRKTASSSSSNWWAPVFGWSSEPDYIDSGSKAETRDLASGTSKSDPETKSMRARFSPGCFTEAKARRLRMMTT

Query:  ETETFHDVMYHSAIASRLASDFKTRTDS
        ETE+FHDVMYHSAIASRLASDFK+R DS
Subjt:  ETETFHDVMYHSAIASRLASDFKTRTDS

A0A1S4E4Y4 uncharacterized protein LOC1035027471.4e-4781.4Show/hide
Query:  MATNLLTFSPAGIRACAASADRRSEHNRRKTASSSSSNWWAPVFGWSSEPDYIDS-GSKAETRDLASGTSKSDPETKSMRARFSPGCFTEAKARRLRMMT
        MATNLLTF+PAGIRACAASADRRS+ NRRK  +SSS+NWWAPVFGWSSEPDYIDS  +KAE ++LA   SK D ETKS+R RFSPGCFTEAKAR+LRMMT
Subjt:  MATNLLTFSPAGIRACAASADRRSEHNRRKTASSSSSNWWAPVFGWSSEPDYIDS-GSKAETRDLASGTSKSDPETKSMRARFSPGCFTEAKARRLRMMT

Query:  TETETFHDVMYHSAIASRLASDFKTRTDS
        TETE+FHDVMYHSAIASRLASDFK+R DS
Subjt:  TETETFHDVMYHSAIASRLASDFKTRTDS

A0A5D3CSV6 Uncharacterized protein1.4e-4781.4Show/hide
Query:  MATNLLTFSPAGIRACAASADRRSEHNRRKTASSSSSNWWAPVFGWSSEPDYIDS-GSKAETRDLASGTSKSDPETKSMRARFSPGCFTEAKARRLRMMT
        MATNLLTF+PAGIRACAASADRRS+ NRRK  +SSS+NWWAPVFGWSSEPDYIDS  +KAE ++LA   SK D ETKS+R RFSPGCFTEAKAR+LRMMT
Subjt:  MATNLLTFSPAGIRACAASADRRSEHNRRKTASSSSSNWWAPVFGWSSEPDYIDS-GSKAETRDLASGTSKSDPETKSMRARFSPGCFTEAKARRLRMMT

Query:  TETETFHDVMYHSAIASRLASDFKTRTDS
        TETE+FHDVMYHSAIASRLASDFK+R DS
Subjt:  TETETFHDVMYHSAIASRLASDFKTRTDS

A0A6J1HBD8 uncharacterized protein LOC1114613087.8e-4676.15Show/hide
Query:  MATNLLTFSPAGIRACAASADRRSEHNRRK--TASSSSSNWWAPVFGWSSEPDYIDSGSKAETRDLASGTSKSDPETKSMRARFSPGCFTEAKARRLRMM
        MATNL TF+P  IRACA+SAD    HNRRK  ++SSSSSNWWAPVFGWSSEPDYIDSG+K+  ++LA G SKSDPETKS R RFSPGCFTE+KAR+LR+M
Subjt:  MATNLLTFSPAGIRACAASADRRSEHNRRK--TASSSSSNWWAPVFGWSSEPDYIDSGSKAETRDLASGTSKSDPETKSMRARFSPGCFTEAKARRLRMM

Query:  TTETETFHDVMYHSAIASRLASDFKTRTDS
        T ETE+FHDVMYHSAIASRLA+DFK+R DS
Subjt:  TTETETFHDVMYHSAIASRLASDFKTRTDS

A0A6J1JBM9 uncharacterized protein LOC1114853091.5e-4476.56Show/hide
Query:  MATNLLTFSPAGIRACAASADRRSEHNRRKTASSSSSNWWAPVFGWSSEPDYIDSGSKAETRDLASGTSKSDPETKSMRARFSPGCFTEAKARRLRMMTT
        MATNL TF+P  IRACA+SAD    HNRRKT SSSSSNWWAPVFGWSSEPDYIDS +K+  +  A G SKSDPETKS R RFSPGCFTE+KAR+LR+MT 
Subjt:  MATNLLTFSPAGIRACAASADRRSEHNRRKTASSSSSNWWAPVFGWSSEPDYIDSGSKAETRDLASGTSKSDPETKSMRARFSPGCFTEAKARRLRMMTT

Query:  ETETFHDVMYHSAIASRLASDFKTRTDS
        ETE+FHDVMYHSAIASRLA+DFK+R DS
Subjt:  ETETFHDVMYHSAIASRLASDFKTRTDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52720.1 unknown protein1.4e-1844.35Show/hide
Query:  IRACAASADRRSEHNRRKTASSSSSNWWAPVFGWSSEPDYIDSGSKAETRDLASGTSKSDPETKSMRARFSPGCFTEAKARRLRMMTTETETFHDVMYHS
        IRA + S     + NR+K+A+     WWAP+FG  S+PDY++  S   T       +    +      +F  GCFTE KA++LR  T E  TFHDVMYHS
Subjt:  IRACAASADRRSEHNRRKTASSSSSNWWAPVFGWSSEPDYIDSGSKAETRDLASGTSKSDPETKSMRARFSPGCFTEAKARRLRMMTTETETFHDVMYHS

Query:  AIASRLASDFKTRTD
        AIASRLASD   R +
Subjt:  AIASRLASDFKTRTD

AT3G15630.1 unknown protein5.8e-1747.01Show/hide
Query:  AGIRACAASADRR--SEHNRRKTASSSSSNWWAPVFGWSSEPDYIDSGSKAETRDLASGTSKSDPETKSMRARFSPGCFTEAKARRLRMMTTETETFHDV
        A I +C+A +  R  SE +  +    SS +WWAP+FG SSEPDY++     +T +L S   K+  E +S+R      C TE KA++LR  T E  TFHDV
Subjt:  AGIRACAASADRR--SEHNRRKTASSSSSNWWAPVFGWSSEPDYIDSGSKAETRDLASGTSKSDPETKSMRARFSPGCFTEAKARRLRMMTTETETFHDV

Query:  MYHSAIASRLASDFKTR
        MYHSAIASRLASD + +
Subjt:  MYHSAIASRLASDFKTR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACTAATCTCCTCACTTTTTCCCCCGCCGGCATCCGTGCCTGTGCCGCCTCCGCCGACCGACGCTCCGAACATAACCGCCGGAAAACCGCCTCCTCCTCCTCTTC
CAACTGGTGGGCCCCGGTCTTCGGCTGGTCCTCCGAACCCGACTATATCGACTCCGGCAGCAAGGCCGAAACTCGTGACCTCGCCAGCGGTACTTCAAAATCGGATCCGG
AGACGAAATCCATGAGGGCTCGATTTTCCCCCGGCTGCTTCACGGAGGCGAAGGCTCGGCGGCTGCGCATGATGACGACGGAAACGGAGACATTTCACGACGTTATGTAC
CACTCGGCAATTGCTTCTCGCCTCGCTTCCGACTTCAAAACTCGCACCGATTCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCACTAATCTCCTCACTTTTTCCCCCGCCGGCATCCGTGCCTGTGCCGCCTCCGCCGACCGACGCTCCGAACATAACCGCCGGAAAACCGCCTCCTCCTCCTCTTC
CAACTGGTGGGCCCCGGTCTTCGGCTGGTCCTCCGAACCCGACTATATCGACTCCGGCAGCAAGGCCGAAACTCGTGACCTCGCCAGCGGTACTTCAAAATCGGATCCGG
AGACGAAATCCATGAGGGCTCGATTTTCCCCCGGCTGCTTCACGGAGGCGAAGGCTCGGCGGCTGCGCATGATGACGACGGAAACGGAGACATTTCACGACGTTATGTAC
CACTCGGCAATTGCTTCTCGCCTCGCTTCCGACTTCAAAACTCGCACCGATTCCTGA
Protein sequenceShow/hide protein sequence
MATNLLTFSPAGIRACAASADRRSEHNRRKTASSSSSNWWAPVFGWSSEPDYIDSGSKAETRDLASGTSKSDPETKSMRARFSPGCFTEAKARRLRMMTTETETFHDVMY
HSAIASRLASDFKTRTDS