; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi06G009350 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G009350
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionGTP-binding nuclear protein
Genome locationchr06:19255030..19257967
RNA-Seq ExpressionLsi06G009350
SyntenyLsi06G009350
Gene Ontology termsGO:0000054 - ribosomal subunit export from nucleus (biological process)
GO:0006606 - protein import into nucleus (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR001806 - Small GTPase
IPR002041 - Ran GTPase
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046736.1 GTP-binding nuclear protein Ran-3-like [Cucumis melo var. makuwa]5.7e-11362.24Show/hide
Query:  ERDPINNPTALPDQKTVDYPSFKLVIVGDGGTGMFFFSVFSTRTIITCDRCIISNGHRNIAFRTQHGVFKLVGFNFWSALDSRKVFKINSFKRTYDPQKL
        ERD   +PT     KTVDYPSFKLVIVGDGGTGMFFF +  T +I      + +   +  + +  + +  LV      ALDS                 L
Subjt:  ERDPINNPTALPDQKTVDYPSFKLVIVGDGGTGMFFFSVFSTRTIITCDRCIISNGHRNIAFRTQHGVFKLVGFNFWSALDSRKVFKINSFKRTYDPQKL

Query:  VHLRYCLLVVYKILKIHYISLHMRILKRLQQRKKERKEIYELFGYWISIFKGFSLVEMDSSRKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIR
           + CL  +  ++ +                   R+EI        S+ K  S V M    KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIR
Subjt:  VHLRYCLLVVYKILKIHYISLHMRILKRLQQRKKERKEIYELFGYWISIFKGFSLVEMDSSRKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIR

Query:  FYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRNKTVVYERIVAMSGRSSVSCLPSDDLLTCRVCENIPIVLCGNKVDVKNRQVKAK
        FYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHR+                           CRVCENIPIVLCGNKVDVKNRQVKAK
Subjt:  FYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRNKTVVYERIVAMSGRSSVSCLPSDDLLTCRVCENIPIVLCGNKVDVKNRQVKAK

Query:  QVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVESPALAPPEVHIDLAAQQQHEAELVAAASQPLPDDDDDAFE
        QVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD NIHFVESPALAPPEVHIDLAAQQQHEAELVAAASQPLPDDDDDAF+
Subjt:  QVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVESPALAPPEVHIDLAAQQQHEAELVAAASQPLPDDDDDAFE

KAG6504182.1 hypothetical protein ZIOFF_036513 [Zingiber officinale]5.2e-10659.15Show/hide
Query:  PTALPDQKTVDYPSFKLVIVGDGGTGMFFFSVFSTRTIITCDRCIISNGHRNIAFRTQHGVFKLVGFNFWSALDSRKVFKINSFKRTYDPQKLVHLRYCL
        P ALP+Q+TVDYPSFKLV+VGDGGTG    S+F             S G  ++    QH +                              KL   R  L
Subjt:  PTALPDQKTVDYPSFKLVIVGDGGTGMFFFSVFSTRTIITCDRCIISNGHRNIAFRTQHGVFKLVGFNFWSALDSRKVFKINSFKRTYDPQKLVHLRYCL

Query:  LVVYKILKIHYISLHMRILKRLQQRKKERKEIYELFGYWISIFKGFSLVEMDSSRKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTA
        +VV                               LF  W + +            KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTA
Subjt:  LVVYKILKIHYISLHMRILKRLQQRKKERKEIYELFGYWISIFKGFSLVEMDSSRKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTA

Query:  GQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRNKTVVYERIVAMSGRSSVSCLPSDDLLTCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRK
        GQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHR+                           CRVCENIPIVLCGNKVDVK+RQVKAKQVTFHRK
Subjt:  GQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRNKTVVYERIVAMSGRSSVSCLPSDDLLTCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRK

Query:  KNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVESPALAPPEVHIDLAAQQQHEAELVAAASQPLPDDDDDAFE
        KNLQYYEISAKSNYNFEKPFLYLARKLAGDPN+HFVESPALAPPEV IDLAAQQQHEAEL AAA+QPLPDDDDD  +
Subjt:  KNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVESPALAPPEVHIDLAAQQQHEAELVAAASQPLPDDDDDAFE

KAG6507589.1 hypothetical protein ZIOFF_032939 [Zingiber officinale]6.1e-10759.04Show/hide
Query:  TALPDQKTVDYPSFKLVIVGDGGTGMFFFSVFSTRTIITCDRCIISNGHRNIAFRTQHGVFKLVGFNFWSALDSRKVFKINSFKRTYDPQKLVHLRYCLL
        TALP+Q+TVDYPSFKLV+VGDGGTG    S+FS  +   C   ++S                                            KL   R  L+
Subjt:  TALPDQKTVDYPSFKLVIVGDGGTGMFFFSVFSTRTIITCDRCIISNGHRNIAFRTQHGVFKLVGFNFWSALDSRKVFKINSFKRTYDPQKLVHLRYCLL

Query:  VVYKILKIHYISLHMRILKRLQQRKKERKEIYELFGYWISIFKGFSLVEMDSSRKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAG
        VV                               LF  W + +            KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAG
Subjt:  VVYKILKIHYISLHMRILKRLQQRKKERKEIYELFGYWISIFKGFSLVEMDSSRKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAG

Query:  QEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRNKTVVYERIVAMSGRSSVSCLPSDDLLTCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK
        QEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHR+                           CRVCENIPIVLCGNKVDVK+RQVKAKQVTFHRKK
Subjt:  QEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRNKTVVYERIVAMSGRSSVSCLPSDDLLTCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK

Query:  NLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVESPALAPPEVHIDLAAQQQHEAELVAAASQPLPDDDDDAFE
        NLQYYEISAKSNYNFEKPFLYLARKLAGDPN+HFVESPALAPPEV IDLAAQQQHEAEL AAA+QPLPDDDDD  +
Subjt:  NLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVESPALAPPEVHIDLAAQQQHEAELVAAASQPLPDDDDDAFE

XP_022767983.1 GTP-binding nuclear protein Ran-3-like [Durio zibethinus]2.6e-10586.94Show/hide
Query:  KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRNKTVVYERIVAMSGRS
        KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHR+               
Subjt:  KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRNKTVVYERIVAMSGRS

Query:  SVSCLPSDDLLTCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVESPALAPPEVHIDLAAQQQ
                    CRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPN+HFVESPALAPPEVHIDLAAQQQ
Subjt:  SVSCLPSDDLLTCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVESPALAPPEVHIDLAAQQQ

Query:  HEAELVAAASQPLPDDDDDAFE
        HEAELVAAASQPLPDDDDDAFE
Subjt:  HEAELVAAASQPLPDDDDDAFE

XP_038879205.1 GTP-binding nuclear protein Ran1B [Benincasa hispida]3.3e-10586.94Show/hide
Query:  KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRNKTVVYERIVAMSGRS
        KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHR+               
Subjt:  KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRNKTVVYERIVAMSGRS

Query:  SVSCLPSDDLLTCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVESPALAPPEVHIDLAAQQQ
                    CRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVESPALAPPEVHIDLAAQQQ
Subjt:  SVSCLPSDDLLTCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVESPALAPPEVHIDLAAQQQ

Query:  HEAELVAAASQPLPDDDDDAFE
        HEAELVAAASQPLPDDDDDAF+
Subjt:  HEAELVAAASQPLPDDDDDAFE

TrEMBL top hitse value%identityAlignment
A0A068PXN5 GTP-binding nuclear protein2.1e-10586.94Show/hide
Query:  KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRNKTVVYERIVAMSGRS
        KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHR+               
Subjt:  KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRNKTVVYERIVAMSGRS

Query:  SVSCLPSDDLLTCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVESPALAPPEVHIDLAAQQQ
                    CRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVESPALAPPEVHIDLAAQQQ
Subjt:  SVSCLPSDDLLTCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVESPALAPPEVHIDLAAQQQ

Query:  HEAELVAAASQPLPDDDDDAFE
        HEAEL AAASQPLPDDDDDAFE
Subjt:  HEAELVAAASQPLPDDDDDAFE

A0A1U8JPJ0 GTP-binding nuclear protein3.6e-10586.49Show/hide
Query:  KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRNKTVVYERIVAMSGRS
        KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHR+               
Subjt:  KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRNKTVVYERIVAMSGRS

Query:  SVSCLPSDDLLTCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVESPALAPPEVHIDLAAQQQ
                    CRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPN+HFVESPALAPPEVHIDLAAQQQ
Subjt:  SVSCLPSDDLLTCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVESPALAPPEVHIDLAAQQQ

Query:  HEAELVAAASQPLPDDDDDAFE
        HEAEL AAASQPLPDDDDDAFE
Subjt:  HEAELVAAASQPLPDDDDDAFE

A0A5A7TXQ3 GTP-binding nuclear protein2.8e-11362.24Show/hide
Query:  ERDPINNPTALPDQKTVDYPSFKLVIVGDGGTGMFFFSVFSTRTIITCDRCIISNGHRNIAFRTQHGVFKLVGFNFWSALDSRKVFKINSFKRTYDPQKL
        ERD   +PT     KTVDYPSFKLVIVGDGGTGMFFF +  T +I      + +   +  + +  + +  LV      ALDS                 L
Subjt:  ERDPINNPTALPDQKTVDYPSFKLVIVGDGGTGMFFFSVFSTRTIITCDRCIISNGHRNIAFRTQHGVFKLVGFNFWSALDSRKVFKINSFKRTYDPQKL

Query:  VHLRYCLLVVYKILKIHYISLHMRILKRLQQRKKERKEIYELFGYWISIFKGFSLVEMDSSRKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIR
           + CL  +  ++ +                   R+EI        S+ K  S V M    KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIR
Subjt:  VHLRYCLLVVYKILKIHYISLHMRILKRLQQRKKERKEIYELFGYWISIFKGFSLVEMDSSRKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIR

Query:  FYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRNKTVVYERIVAMSGRSSVSCLPSDDLLTCRVCENIPIVLCGNKVDVKNRQVKAK
        FYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHR+                           CRVCENIPIVLCGNKVDVKNRQVKAK
Subjt:  FYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRNKTVVYERIVAMSGRSSVSCLPSDDLLTCRVCENIPIVLCGNKVDVKNRQVKAK

Query:  QVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVESPALAPPEVHIDLAAQQQHEAELVAAASQPLPDDDDDAFE
        QVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD NIHFVESPALAPPEVHIDLAAQQQHEAELVAAASQPLPDDDDDAF+
Subjt:  QVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVESPALAPPEVHIDLAAQQQHEAELVAAASQPLPDDDDDAFE

A0A6P6AT88 GTP-binding nuclear protein1.2e-10586.94Show/hide
Query:  KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRNKTVVYERIVAMSGRS
        KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHR+               
Subjt:  KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRNKTVVYERIVAMSGRS

Query:  SVSCLPSDDLLTCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVESPALAPPEVHIDLAAQQQ
                    CRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPN+HFVESPALAPPEVHIDLAAQQQ
Subjt:  SVSCLPSDDLLTCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVESPALAPPEVHIDLAAQQQ

Query:  HEAELVAAASQPLPDDDDDAFE
        HEAELVAAASQPLPDDDDDAFE
Subjt:  HEAELVAAASQPLPDDDDDAFE

A0A7J9MAP7 GTP-binding nuclear protein1.6e-10585.4Show/hide
Query:  DSSRKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRNKTVVYERIVAM
        D   KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHR+           
Subjt:  DSSRKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRNKTVVYERIVAM

Query:  SGRSSVSCLPSDDLLTCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVESPALAPPEVHIDLA
                        CRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPN+HFVESPALAPPEVHIDLA
Subjt:  SGRSSVSCLPSDDLLTCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVESPALAPPEVHIDLA

Query:  AQQQHEAELVAAASQPLPDDDDDAFE
        AQQQHEAEL AAASQPLPDDDDDAFE
Subjt:  AQQQHEAELVAAASQPLPDDDDDAFE

SwissProt top hitse value%identityAlignment
P41917 GTP-binding nuclear protein Ran-27.7e-10583.78Show/hide
Query:  KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRNKTVVYERIVAMSGRS
        KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHR+               
Subjt:  KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRNKTVVYERIVAMSGRS

Query:  SVSCLPSDDLLTCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVESPALAPPEVHIDLAAQQQ
                    CRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD N+HFVESPALAPPEVH+D+AAQQQ
Subjt:  SVSCLPSDDLLTCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVESPALAPPEVHIDLAAQQQ

Query:  HEAELVAAASQPLPDDDDDAFE
        +EA+L AAA+QPLPDDDDDAFE
Subjt:  HEAELVAAASQPLPDDDDDAFE

P41917 GTP-binding nuclear protein Ran-27.0e-0582.14Show/hide
Query:  ALPDQKTVDYPSFKLVIVGDGGTGMFFF
        ALP+Q+TVDYPSFKLVIVGDGGTG   F
Subjt:  ALPDQKTVDYPSFKLVIVGDGGTGMFFF

P41918 GTP-binding nuclear protein Ran-A11.6e-10584.68Show/hide
Query:  KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRNKTVVYERIVAMSGRS
        KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHR+               
Subjt:  KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRNKTVVYERIVAMSGRS

Query:  SVSCLPSDDLLTCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVESPALAPPEVHIDLAAQQQ
                    CRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPN+HFVESPALAPPEV IDLAAQQQ
Subjt:  SVSCLPSDDLLTCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVESPALAPPEVHIDLAAQQQ

Query:  HEAELVAAASQPLPDDDDDAFE
        HEAEL AAASQPLPDDDD+ F+
Subjt:  HEAELVAAASQPLPDDDDDAFE

P54765 GTP-binding nuclear protein Ran1A (Fragment)7.0e-10685.14Show/hide
Query:  KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRNKTVVYERIVAMSGRS
        KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHR+               
Subjt:  KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRNKTVVYERIVAMSGRS

Query:  SVSCLPSDDLLTCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVESPALAPPEVHIDLAAQQQ
                    CRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPN+HFVESPALAPPEV IDLAAQQQ
Subjt:  SVSCLPSDDLLTCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVESPALAPPEVHIDLAAQQQ

Query:  HEAELVAAASQPLPDDDDDAFE
        HEAEL  AASQPLPDDDDDAF+
Subjt:  HEAELVAAASQPLPDDDDDAFE

P54766 GTP-binding nuclear protein Ran1B (Fragment)1.8e-10685.59Show/hide
Query:  KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRNKTVVYERIVAMSGRS
        KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHR+               
Subjt:  KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRNKTVVYERIVAMSGRS

Query:  SVSCLPSDDLLTCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVESPALAPPEVHIDLAAQQQ
                    CRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPN+HFVESPALAPPEV IDLAAQQQ
Subjt:  SVSCLPSDDLLTCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVESPALAPPEVHIDLAAQQQ

Query:  HEAELVAAASQPLPDDDDDAFE
        HEAEL AAASQPLPDDDDDAF+
Subjt:  HEAELVAAASQPLPDDDDDAFE

Q8H156 GTP-binding nuclear protein Ran-32.0e-10585.14Show/hide
Query:  KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRNKTVVYERIVAMSGRS
        KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHR+               
Subjt:  KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRNKTVVYERIVAMSGRS

Query:  SVSCLPSDDLLTCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVESPALAPPEVHIDLAAQQQ
                    CRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD N+HFVESPALAPPEV IDLAAQQQ
Subjt:  SVSCLPSDDLLTCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVESPALAPPEVHIDLAAQQQ

Query:  HEAELVAAASQPLPDDDDDAFE
        HEAEL AAASQPLPDDDDD FE
Subjt:  HEAELVAAASQPLPDDDDDAFE

Q8H156 GTP-binding nuclear protein Ran-37.0e-0582.14Show/hide
Query:  ALPDQKTVDYPSFKLVIVGDGGTGMFFF
        ALP+Q+TVDYPSFKLVIVGDGGTG   F
Subjt:  ALPDQKTVDYPSFKLVIVGDGGTGMFFF

Arabidopsis top hitse value%identityAlignment
AT4G39890.1 RAB GTPase homolog H1C4.5e-1529.9Show/hide
Query:  ISIFKGFSLVEM--DSSRKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTW
        +S    F LV +   S  KT+ + R +  +F+  Y+PTIG++      +     +R   WDTAGQE+F  L   Y      AI+++DV+ R T+ N   W
Subjt:  ISIFKGFSLVEM--DSSRKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTW

Query:  HRNKTVVYERIVAMSGRSSVSCLPSDDLLTCRVCENIPIVLCGNKVD-VKNRQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARKLAG
                                 +D+   R   N+ IVL GNK D V+ RQV   +     K+  + + E SAK N+N +  F  +A  L G
Subjt:  HRNKTVVYERIVAMSGRSSVSCLPSDDLLTCRVCENIPIVLCGNKVD-VKNRQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARKLAG

AT5G20010.1 RAS-related nuclear protein-15.1e-10482.43Show/hide
Query:  KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRNKTVVYERIVAMSGRS
        KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHR+               
Subjt:  KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRNKTVVYERIVAMSGRS

Query:  SVSCLPSDDLLTCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVESPALAPPEVHIDLAAQQQ
                    CRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD N+HFVE+PALAPPEVHID+A QQ+
Subjt:  SVSCLPSDDLLTCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVESPALAPPEVHIDLAAQQQ

Query:  HEAELVAAASQPLPDDDDDAFE
        +EAEL+ AA+QPLPDDDDD FE
Subjt:  HEAELVAAASQPLPDDDDDAFE

AT5G20010.1 RAS-related nuclear protein-15.0e-0682.14Show/hide
Query:  ALPDQKTVDYPSFKLVIVGDGGTGMFFF
        ALP+Q+TVDYPSFKLVIVGDGGTG   F
Subjt:  ALPDQKTVDYPSFKLVIVGDGGTGMFFF

AT5G20020.1 RAS-related GTP-binding nuclear protein 25.5e-10683.78Show/hide
Query:  KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRNKTVVYERIVAMSGRS
        KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHR+               
Subjt:  KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRNKTVVYERIVAMSGRS

Query:  SVSCLPSDDLLTCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVESPALAPPEVHIDLAAQQQ
                    CRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD N+HFVESPALAPPEVH+D+AAQQQ
Subjt:  SVSCLPSDDLLTCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVESPALAPPEVHIDLAAQQQ

Query:  HEAELVAAASQPLPDDDDDAFE
        +EA+L AAA+QPLPDDDDDAFE
Subjt:  HEAELVAAASQPLPDDDDDAFE

AT5G20020.1 RAS-related GTP-binding nuclear protein 25.0e-0682.14Show/hide
Query:  ALPDQKTVDYPSFKLVIVGDGGTGMFFF
        ALP+Q+TVDYPSFKLVIVGDGGTG   F
Subjt:  ALPDQKTVDYPSFKLVIVGDGGTGMFFF

AT5G55080.1 ras-related nuclear protein 42.1e-6558.69Show/hide
Query:  KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRNKTVVYERIVAMSGRS
        KTTF+KRHLTGEFE   EPT+GV+++PLDFFTN GKIRF CWDTAGQEK+ GL+D YYIHGQCAIIMFDVTAR TY N+  W+R+               
Subjt:  KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRNKTVVYERIVAMSGRS

Query:  SVSCLPSDDLLTCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVESPALAPPEVHIDLAAQQQ
                     RVC+NIPIVLCGNKVDV +RQ+K K V++HRKK LQYYE+SAK+N NFEKPFLYLAR++AGD  + FVES     PE  ID    + 
Subjt:  SVSCLPSDDLLTCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVESPALAPPEVHIDLAAQQQ

Query:  HEAELVAAASQPL
         +   V A +QPL
Subjt:  HEAELVAAASQPL

AT5G55190.1 RAN GTPase 31.4e-10685.14Show/hide
Query:  KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRNKTVVYERIVAMSGRS
        KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHR+               
Subjt:  KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRNKTVVYERIVAMSGRS

Query:  SVSCLPSDDLLTCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVESPALAPPEVHIDLAAQQQ
                    CRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD N+HFVESPALAPPEV IDLAAQQQ
Subjt:  SVSCLPSDDLLTCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVESPALAPPEVHIDLAAQQQ

Query:  HEAELVAAASQPLPDDDDDAFE
        HEAEL AAASQPLPDDDDD FE
Subjt:  HEAELVAAASQPLPDDDDDAFE

AT5G55190.1 RAN GTPase 35.0e-0682.14Show/hide
Query:  ALPDQKTVDYPSFKLVIVGDGGTGMFFF
        ALP+Q+TVDYPSFKLVIVGDGGTG   F
Subjt:  ALPDQKTVDYPSFKLVIVGDGGTGMFFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGCCCCAAAATTCAAAAAACTCAAGATTCAATTCGATGGGGAAAAGCAACGGCGGAGCGTGATCCGATTAACAATCCAACGGCTTTGCCGGACCAGAAGACTGTTGATTA
TCCGAGTTTCAAGCTTGTGATTGTTGGCGATGGTGGCACTGGTATGTTCTTTTTTTCCGTTTTTTCTACGAGAACAATTATCACTTGTGATCGCTGTATCATATCTAATG
GTCATCGCAATATAGCATTTCGGACGCAACATGGTGTTTTCAAGCTAGTAGGTTTTAATTTTTGGTCAGCACTTGATAGTCGAAAGGTATTCAAGATTAATTCTTTTAAG
AGAACGTATGATCCACAGAAATTGGTCCACCTTCGTTATTGTCTGTTGGTTGTCTATAAGATCTTGAAAATTCATTACATCTCCTTGCACATGAGGATTTTGAAACGGTT
ACAACAAAGGAAGAAAGAAAGAAAAGAGATTTACGAACTTTTCGGATATTGGATTTCAATTTTTAAAGGCTTTTCCTTGGTCGAGATGGATTCATCAAGAAAAACAACTT
TTGTGAAGAGACATCTCACAGGGGAGTTTGAAAAGAAATACGAACCAACCATTGGAGTGGAAGTGCACCCTTTGGACTTCTTCACCAACTGTGGGAAAATTAGATTTTAC
TGCTGGGACACTGCTGGGCAGGAGAAGTTCGGTGGTTTACGGGATGGCTACTACATCCACGGGCAATGTGCAATCATCATGTTTGATGTTACTGCCAGATTGACATACAA
AAATGTTCCTACATGGCATCGAAACAAAACAGTTGTATATGAACGAATTGTTGCAATGTCAGGGCGTTCTTCTGTAAGCTGCTTACCATCTGATGACTTATTAACCTGCA
GGGTGTGTGAGAATATTCCCATTGTTCTTTGTGGAAACAAGGTCGATGTGAAAAACAGGCAGGTTAAGGCCAAGCAAGTCACATTCCACAGGAAGAAGAACCTACAGTAT
TATGAAATTTCTGCGAAGAGTAACTACAACTTTGAAAAACCATTCCTGTACTTGGCCAGGAAGTTAGCTGGGGATCCTAACATTCATTTTGTGGAGTCTCCAGCTCTAGC
TCCTCCTGAAGTACACATTGACTTGGCTGCCCAGCAACAGCATGAAGCTGAATTGGTGGCAGCTGCCAGTCAACCTCTTCCAGATGACGACGACGACGCTTTCGAGTAA
mRNA sequenceShow/hide mRNA sequence
CGCCCCAAAATTCAAAAAACTCAAGATTCAATTCGATGGGGAAAAGCAACGGCGGAGCGTGATCCGATTAACAATCCAACGGCTTTGCCGGACCAGAAGACTGTTGATTA
TCCGAGTTTCAAGCTTGTGATTGTTGGCGATGGTGGCACTGGTATGTTCTTTTTTTCCGTTTTTTCTACGAGAACAATTATCACTTGTGATCGCTGTATCATATCTAATG
GTCATCGCAATATAGCATTTCGGACGCAACATGGTGTTTTCAAGCTAGTAGGTTTTAATTTTTGGTCAGCACTTGATAGTCGAAAGGTATTCAAGATTAATTCTTTTAAG
AGAACGTATGATCCACAGAAATTGGTCCACCTTCGTTATTGTCTGTTGGTTGTCTATAAGATCTTGAAAATTCATTACATCTCCTTGCACATGAGGATTTTGAAACGGTT
ACAACAAAGGAAGAAAGAAAGAAAAGAGATTTACGAACTTTTCGGATATTGGATTTCAATTTTTAAAGGCTTTTCCTTGGTCGAGATGGATTCATCAAGAAAAACAACTT
TTGTGAAGAGACATCTCACAGGGGAGTTTGAAAAGAAATACGAACCAACCATTGGAGTGGAAGTGCACCCTTTGGACTTCTTCACCAACTGTGGGAAAATTAGATTTTAC
TGCTGGGACACTGCTGGGCAGGAGAAGTTCGGTGGTTTACGGGATGGCTACTACATCCACGGGCAATGTGCAATCATCATGTTTGATGTTACTGCCAGATTGACATACAA
AAATGTTCCTACATGGCATCGAAACAAAACAGTTGTATATGAACGAATTGTTGCAATGTCAGGGCGTTCTTCTGTAAGCTGCTTACCATCTGATGACTTATTAACCTGCA
GGGTGTGTGAGAATATTCCCATTGTTCTTTGTGGAAACAAGGTCGATGTGAAAAACAGGCAGGTTAAGGCCAAGCAAGTCACATTCCACAGGAAGAAGAACCTACAGTAT
TATGAAATTTCTGCGAAGAGTAACTACAACTTTGAAAAACCATTCCTGTACTTGGCCAGGAAGTTAGCTGGGGATCCTAACATTCATTTTGTGGAGTCTCCAGCTCTAGC
TCCTCCTGAAGTACACATTGACTTGGCTGCCCAGCAACAGCATGAAGCTGAATTGGTGGCAGCTGCCAGTCAACCTCTTCCAGATGACGACGACGACGCTTTCGAGTAAA
AAGGTCAATCATCTGGTGACGATGCCCTTTGCATATCTATTTTGAGTGAGATTTTTTTCTCCTTGCTAGGATTAACAGAAGGGAATAGGTGGGCAGGGTATGGCTGAGGA
TTGAAACTTGAATTTTGAAAACGTTAGTTTTCTTCCCCCTTAGATGAAAGAAATTTGTTGTGGTGTAGATGGTGGGTTTCTGTTGGTGAGATTCTCTATCGATTATAATA
GAGAGCCACATGGCCTTCGATGAAAGTTTCATTATGCAGAGTTTTTCTATTCAGTGTTTCACTATTTGATTTGTGTTCATTATTCTCTTTATTTCTTGTCTGGGGTTATC
TTTTGCTCCTAGACACTTGTGTGAACTATGTTCATTGGACTGGATGGGAATTGCATTTTGGTGGCAACATTGTTCTCATGAATAAGAATAGGATGTAGTAAGTGAGTGGA
GAATAAATTAGTAGGTTTATAGGAGTTCATTTATGCTTCTATCCTTTCTAGGTAATATTCTTCAACGAGTTATTAAAATATAGCAAAACTATAGAATCATAATCTTATTA
ATATG
Protein sequenceShow/hide protein sequence
RPKIQKTQDSIRWGKATAERDPINNPTALPDQKTVDYPSFKLVIVGDGGTGMFFFSVFSTRTIITCDRCIISNGHRNIAFRTQHGVFKLVGFNFWSALDSRKVFKINSFK
RTYDPQKLVHLRYCLLVVYKILKIHYISLHMRILKRLQQRKKERKEIYELFGYWISIFKGFSLVEMDSSRKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFY
CWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRNKTVVYERIVAMSGRSSVSCLPSDDLLTCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQY
YEISAKSNYNFEKPFLYLARKLAGDPNIHFVESPALAPPEVHIDLAAQQQHEAELVAAASQPLPDDDDDAFE