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Lsi06G009480 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G009480
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionD-mannose binding lectin protein with Apple-likecarbohydrate-binding domain
Genome locationchr06:19408953..19410819
RNA-Seq ExpressionLsi06G009480
SyntenyLsi06G009480
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A2I0KEY0 Uncharacterized protein (Fragment)5.4e-0443.48Show/hide
Query:  LLQSAKLIQPRPQPDAESSFPFPPLQETKGQPFLKGKILKSG--EDSKGVFARSFVFSDSNDESGERGCWGFGVLDLIGFRAKAWDCKLMDM
        L  S +L QPR      +SFP    +  KG+PFLKG+ LK G  E      + S+V   S  E+G  G   FGVL LIG  AKAW+ +L DM
Subjt:  LLQSAKLIQPRPQPDAESSFPFPPLQETKGQPFLKGKILKSG--EDSKGVFARSFVFSDSNDESGERGCWGFGVLDLIGFRAKAWDCKLMDM
A0A5A7PY84 D-mannose binding lectin protein with Apple-likecarbohydrate-binding domain (Fragment)5.4e-0438.66Show/hide
Query:  LLQSAKLIQPRPQPDAESSFPFPPLQETKGQPFLKGKILKSGEDSKGVFARSFVFSDSND------ESGERGCWGFGVLDLIGFRAKAWDCKLMDMEGVR
        LL S +L QPR      SS P        G PFLKGK LKSGE          +  DS D      + GER   G GVLDL G  AKAW  +L+ +    
Subjt:  LLQSAKLIQPRPQPDAESSFPFPPLQETKGQPFLKGKILKSGEDSKGVFARSFVFSDSND------ESGERGCWGFGVLDLIGFRAKAWDCKLMDMEGVR

Query:  VEEENVAPLKEVLNGEQKQ
        V +E+    K V+  E+K+
Subjt:  VEEENVAPLKEVLNGEQKQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCAACCTGGCCATGGCTGAGAACTGTGATAGACCACCTCCCCAACTTCAATACCAGTCTCTTCCAATGTTTCTCTTCTCACAGCTTCTTCCAAGCTTTCTCCAGGC
TGTTTCAAAAGCAAATCAAGGAACTATATTAGTTCATGAAACAAGATTAAGATTAAACTATAGAATGCACATGACATCAAACTACAAAGGGATTCAACAATCATATAAGC
AAAGGACAATGATCTCACAGGATCGACACGAGGGAAAATCCTCAAATTACATGACTGATTGGAGCATTCCCTTCGTTTTCCAGCTTCCATTGGGACTGTCCTTTCTCCAC
AATGTCCACAGAAACGTGATGTTCTATGCCAATCTAGCAAAGCCCTGCCCTGAGAGATCATTTCCAAAAACCAGGAAGACCAATAAATCTTCCGTTACCTGCGACCCAGA
CAAGGCCAATAGACTTTTGCAATCAGCAAAGCTGATCCAACCCAGACCCCAACCAGACGCCGAATCATCATTCCCCTTCCCGCCATTGCAAGAAACCAAAGGCCAGCCTT
TCTTGAAGGGCAAAATTTTGAAATCTGGAGAAGATAGCAAAGGGGTTTTCGCCAGAAGCTTCGTTTTCAGCGATTCGAACGATGAATCGGGGGAAAGGGGATGTTGGGGT
TTCGGGGTTTTGGATCTGATAGGGTTCCGCGCAAAGGCATGGGACTGTAAATTAATGGACATGGAAGGGGTTCGGGTGGAAGAAGAGAATGTTGCTCCATTGAAGGAGGT
GTTAAACGGCGAGCAAAAACAAGACGTGGGTATTCCATTTCTGTTAGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACCAACCTGGCCATGGCTGAGAACTGTGATAGACCACCTCCCCAACTTCAATACCAGTCTCTTCCAATGTTTCTCTTCTCACAGCTTCTTCCAAGCTTTCTCCAGGC
TGTTTCAAAAGCAAATCAAGGAACTATATTAGTTCATGAAACAAGATTAAGATTAAACTATAGAATGCACATGACATCAAACTACAAAGGGATTCAACAATCATATAAGC
AAAGGACAATGATCTCACAGGATCGACACGAGGGAAAATCCTCAAATTACATGACTGATTGGAGCATTCCCTTCGTTTTCCAGCTTCCATTGGGACTGTCCTTTCTCCAC
AATGTCCACAGAAACGTGATGTTCTATGCCAATCTAGCAAAGCCCTGCCCTGAGAGATCATTTCCAAAAACCAGGAAGACCAATAAATCTTCCGTTACCTGCGACCCAGA
CAAGGCCAATAGACTTTTGCAATCAGCAAAGCTGATCCAACCCAGACCCCAACCAGACGCCGAATCATCATTCCCCTTCCCGCCATTGCAAGAAACCAAAGGCCAGCCTT
TCTTGAAGGGCAAAATTTTGAAATCTGGAGAAGATAGCAAAGGGGTTTTCGCCAGAAGCTTCGTTTTCAGCGATTCGAACGATGAATCGGGGGAAAGGGGATGTTGGGGT
TTCGGGGTTTTGGATCTGATAGGGTTCCGCGCAAAGGCATGGGACTGTAAATTAATGGACATGGAAGGGGTTCGGGTGGAAGAAGAGAATGTTGCTCCATTGAAGGAGGT
GTTAAACGGCGAGCAAAAACAAGACGTGGGTATTCCATTTCTGTTAGAGTAA
Protein sequenceShow/hide protein sequence
MTNLAMAENCDRPPPQLQYQSLPMFLFSQLLPSFLQAVSKANQGTILVHETRLRLNYRMHMTSNYKGIQQSYKQRTMISQDRHEGKSSNYMTDWSIPFVFQLPLGLSFLH
NVHRNVMFYANLAKPCPERSFPKTRKTNKSSVTCDPDKANRLLQSAKLIQPRPQPDAESSFPFPPLQETKGQPFLKGKILKSGEDSKGVFARSFVFSDSNDESGERGCWG
FGVLDLIGFRAKAWDCKLMDMEGVRVEEENVAPLKEVLNGEQKQDVGIPFLLE