; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi06G009530 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G009530
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTransmembrane protein 128-like protein
Genome locationchr06:19460415..19464123
RNA-Seq ExpressionLsi06G009530
SyntenyLsi06G009530
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR033579 - Transmembrane protein 128


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046785.1 transmembrane protein 128-like protein [Cucumis melo var. makuwa]2.0e-9795.74Show/hide
Query:  MSGGTPVAGGYMRQRHSQGYASSGDDVEDDACSRFQTMSFHTPKSRTWIEVVENVLWLASAAFIVYYGDRHSNMVYLLWHDGRIR-RLPLYLGMVGIGLN
        MSGGTPVAGGYMRQRHSQGYASSGDD+EDDACSRFQTMSFHTPKSRTWIEVVENVLWLASAAFIVYYGD+HSNM+YLLWHDGRIR RLPLYLGMVGIGLN
Subjt:  MSGGTPVAGGYMRQRHSQGYASSGDDVEDDACSRFQTMSFHTPKSRTWIEVVENVLWLASAAFIVYYGDRHSNMVYLLWHDGRIR-RLPLYLGMVGIGLN

Query:  VVIFIYTSMSAWSIRRFDEKWELASLSVLPIVTLLGLISFCLLLFALWPIWGFLTIPLLFTLFMACMVVFPNIMIGKFRPQSDVLRTD
        +VIFIYTSMSAWSIRRFDEKWELASLSVLPIVTLLGLISFCLL FALWPIWGFLTIPLLFT+FMACMVVFPNIMIGKFRPQSD LRTD
Subjt:  VVIFIYTSMSAWSIRRFDEKWELASLSVLPIVTLLGLISFCLLLFALWPIWGFLTIPLLFTLFMACMVVFPNIMIGKFRPQSDVLRTD

KAG6589859.1 Mediator of RNA polymerase II transcription subunit 17, partial [Cucurbita argyrosperma subsp. sororia]6.8e-9391.58Show/hide
Query:  MSGGTPVAGGYMRQRHSQGYASSGDDVEDDACSRFQTMSFHTPKSRTWIEVVENVLWLASAAFIVYYGDRHSNMVYLLWHDGRIRRLPLYLGMVGIGLNV
        MSGGTPVAGGYMRQRHSQGYASSGDD+EDDACSRFQ MSFHTPKSRTW+EVVENVLWLASAAFIVYYGDRHSNM+ LLWHDGRIRR PLYLGMV IGLNV
Subjt:  MSGGTPVAGGYMRQRHSQGYASSGDDVEDDACSRFQTMSFHTPKSRTWIEVVENVLWLASAAFIVYYGDRHSNMVYLLWHDGRIRRLPLYLGMVGIGLNV

Query:  VIFIYTSMSAWSIRRFDEKWELASLSVLPIVTLLGLISFCLLLFALWPIWGFLTIPLLFTLFMACMVVFPNIMIGKFR---PQSDVLRTD
        VIFIYTSMSAWSIRRF+EKWE+ASLSVLPI TLLGLISFCLL FALWPIWGFLTIPLLFTLFMACMVVFP+I+IGKFR   PQSDVLRTD
Subjt:  VIFIYTSMSAWSIRRFDEKWELASLSVLPIVTLLGLISFCLLLFALWPIWGFLTIPLLFTLFMACMVVFPNIMIGKFR---PQSDVLRTD

XP_004150017.1 uncharacterized protein LOC101212505 [Cucumis sativus]2.4e-9895.19Show/hide
Query:  MSGGTPVAGGYMRQRHSQGYASSGDDVEDDACSRFQTMSFHTPKSRTWIEVVENVLWLASAAFIVYYGDRHSNMVYLLWHDGRIRRLPLYLGMVGIGLNV
        MSGGTPVAGGYMRQRHSQGYASSGDD+EDDACSRFQTMSFHTPKSRTWIEVVENVLWL SAAFIVYYGDRHSNM+YLLWHDGR+RRLPLYLGMVGIGLN+
Subjt:  MSGGTPVAGGYMRQRHSQGYASSGDDVEDDACSRFQTMSFHTPKSRTWIEVVENVLWLASAAFIVYYGDRHSNMVYLLWHDGRIRRLPLYLGMVGIGLNV

Query:  VIFIYTSMSAWSIRRFDEKWELASLSVLPIVTLLGLISFCLLLFALWPIWGFLTIPLLFTLFMACMVVFPNIMIGKFRPQSDVLRTD
        VIFIYTSMSAWSIRRFDEKWELASLSVLPIVTLLGLISFCLL FALWPIWGFLT+PLLFT+FMACMVVFPNIMIGKFRPQSD LRTD
Subjt:  VIFIYTSMSAWSIRRFDEKWELASLSVLPIVTLLGLISFCLLLFALWPIWGFLTIPLLFTLFMACMVVFPNIMIGKFRPQSDVLRTD

XP_008444020.1 PREDICTED: uncharacterized protein LOC103487466 [Cucumis melo]8.3e-9996.26Show/hide
Query:  MSGGTPVAGGYMRQRHSQGYASSGDDVEDDACSRFQTMSFHTPKSRTWIEVVENVLWLASAAFIVYYGDRHSNMVYLLWHDGRIRRLPLYLGMVGIGLNV
        MSGGTPVAGGYMRQRHSQGYASSGDD+EDDACSRFQTMSFHTPKSRTWIEVVENVLWLASAAFIVYYGD+HSNM+YLLWHDGRIRRLPLYLGMVGIGLN+
Subjt:  MSGGTPVAGGYMRQRHSQGYASSGDDVEDDACSRFQTMSFHTPKSRTWIEVVENVLWLASAAFIVYYGDRHSNMVYLLWHDGRIRRLPLYLGMVGIGLNV

Query:  VIFIYTSMSAWSIRRFDEKWELASLSVLPIVTLLGLISFCLLLFALWPIWGFLTIPLLFTLFMACMVVFPNIMIGKFRPQSDVLRTD
        VIFIYTSMSAWSIRRFDEKWELASLSVLPIVTLLGLISFCLL FALWPIWGFLTIPLLFT+FMACMVVFPNIMIGKFRPQSD LRTD
Subjt:  VIFIYTSMSAWSIRRFDEKWELASLSVLPIVTLLGLISFCLLLFALWPIWGFLTIPLLFTLFMACMVVFPNIMIGKFRPQSDVLRTD

XP_038878339.1 uncharacterized protein LOC120070598 [Benincasa hispida]5.7e-10098.4Show/hide
Query:  MSGGTPVAGGYMRQRHSQGYASSGDDVEDDACSRFQTMSFHTPKSRTWIEVVENVLWLASAAFIVYYGDRHSNMVYLLWHDGRIRRLPLYLGMVGIGLNV
        MSGGTPVAGGYMRQRHSQGYASSGDDVEDDACSRFQTMSFHTPKSRTWIEVVENVLWLASAAFIVYYGDRHSNM+YLLWHDGR+RRLPLYLGMVGIGLNV
Subjt:  MSGGTPVAGGYMRQRHSQGYASSGDDVEDDACSRFQTMSFHTPKSRTWIEVVENVLWLASAAFIVYYGDRHSNMVYLLWHDGRIRRLPLYLGMVGIGLNV

Query:  VIFIYTSMSAWSIRRFDEKWELASLSVLPIVTLLGLISFCLLLFALWPIWGFLTIPLLFTLFMACMVVFPNIMIGKFRPQSDVLRTD
        VIFIYTSMSAWSIRRFDEKWELASLSVLPIVTLLGLISFCLL FALWPIWGFLTIPLLFTLFMACMVVFPNIMIGKFRPQSDVLRTD
Subjt:  VIFIYTSMSAWSIRRFDEKWELASLSVLPIVTLLGLISFCLLLFALWPIWGFLTIPLLFTLFMACMVVFPNIMIGKFRPQSDVLRTD

TrEMBL top hitse value%identityAlignment
A0A0A0LU32 Uncharacterized protein1.2e-9895.19Show/hide
Query:  MSGGTPVAGGYMRQRHSQGYASSGDDVEDDACSRFQTMSFHTPKSRTWIEVVENVLWLASAAFIVYYGDRHSNMVYLLWHDGRIRRLPLYLGMVGIGLNV
        MSGGTPVAGGYMRQRHSQGYASSGDD+EDDACSRFQTMSFHTPKSRTWIEVVENVLWL SAAFIVYYGDRHSNM+YLLWHDGR+RRLPLYLGMVGIGLN+
Subjt:  MSGGTPVAGGYMRQRHSQGYASSGDDVEDDACSRFQTMSFHTPKSRTWIEVVENVLWLASAAFIVYYGDRHSNMVYLLWHDGRIRRLPLYLGMVGIGLNV

Query:  VIFIYTSMSAWSIRRFDEKWELASLSVLPIVTLLGLISFCLLLFALWPIWGFLTIPLLFTLFMACMVVFPNIMIGKFRPQSDVLRTD
        VIFIYTSMSAWSIRRFDEKWELASLSVLPIVTLLGLISFCLL FALWPIWGFLT+PLLFT+FMACMVVFPNIMIGKFRPQSD LRTD
Subjt:  VIFIYTSMSAWSIRRFDEKWELASLSVLPIVTLLGLISFCLLLFALWPIWGFLTIPLLFTLFMACMVVFPNIMIGKFRPQSDVLRTD

A0A1S3BA62 uncharacterized protein LOC1034874664.0e-9996.26Show/hide
Query:  MSGGTPVAGGYMRQRHSQGYASSGDDVEDDACSRFQTMSFHTPKSRTWIEVVENVLWLASAAFIVYYGDRHSNMVYLLWHDGRIRRLPLYLGMVGIGLNV
        MSGGTPVAGGYMRQRHSQGYASSGDD+EDDACSRFQTMSFHTPKSRTWIEVVENVLWLASAAFIVYYGD+HSNM+YLLWHDGRIRRLPLYLGMVGIGLN+
Subjt:  MSGGTPVAGGYMRQRHSQGYASSGDDVEDDACSRFQTMSFHTPKSRTWIEVVENVLWLASAAFIVYYGDRHSNMVYLLWHDGRIRRLPLYLGMVGIGLNV

Query:  VIFIYTSMSAWSIRRFDEKWELASLSVLPIVTLLGLISFCLLLFALWPIWGFLTIPLLFTLFMACMVVFPNIMIGKFRPQSDVLRTD
        VIFIYTSMSAWSIRRFDEKWELASLSVLPIVTLLGLISFCLL FALWPIWGFLTIPLLFT+FMACMVVFPNIMIGKFRPQSD LRTD
Subjt:  VIFIYTSMSAWSIRRFDEKWELASLSVLPIVTLLGLISFCLLLFALWPIWGFLTIPLLFTLFMACMVVFPNIMIGKFRPQSDVLRTD

A0A5A7TZI3 Transmembrane protein 128-like protein9.9e-9895.74Show/hide
Query:  MSGGTPVAGGYMRQRHSQGYASSGDDVEDDACSRFQTMSFHTPKSRTWIEVVENVLWLASAAFIVYYGDRHSNMVYLLWHDGRIR-RLPLYLGMVGIGLN
        MSGGTPVAGGYMRQRHSQGYASSGDD+EDDACSRFQTMSFHTPKSRTWIEVVENVLWLASAAFIVYYGD+HSNM+YLLWHDGRIR RLPLYLGMVGIGLN
Subjt:  MSGGTPVAGGYMRQRHSQGYASSGDDVEDDACSRFQTMSFHTPKSRTWIEVVENVLWLASAAFIVYYGDRHSNMVYLLWHDGRIR-RLPLYLGMVGIGLN

Query:  VVIFIYTSMSAWSIRRFDEKWELASLSVLPIVTLLGLISFCLLLFALWPIWGFLTIPLLFTLFMACMVVFPNIMIGKFRPQSDVLRTD
        +VIFIYTSMSAWSIRRFDEKWELASLSVLPIVTLLGLISFCLL FALWPIWGFLTIPLLFT+FMACMVVFPNIMIGKFRPQSD LRTD
Subjt:  VVIFIYTSMSAWSIRRFDEKWELASLSVLPIVTLLGLISFCLLLFALWPIWGFLTIPLLFTLFMACMVVFPNIMIGKFRPQSDVLRTD

A0A6J1H944 uncharacterized protein LOC1114616869.6e-9391.05Show/hide
Query:  MSGGTPVAGGYMRQRHSQGYASSGDDVEDDACSRFQTMSFHTPKSRTWIEVVENVLWLASAAFIVYYGDRHSNMVYLLWHDGRIRRLPLYLGMVGIGLNV
        MSGGTPVAGGYMRQRHSQGYASSGDD+EDDACSRFQ MSFHTPK RTW+EVVENVLWLASAAFIVYYGDRHSNM+ LLWHDGRIRR PLYLGMV IGLNV
Subjt:  MSGGTPVAGGYMRQRHSQGYASSGDDVEDDACSRFQTMSFHTPKSRTWIEVVENVLWLASAAFIVYYGDRHSNMVYLLWHDGRIRRLPLYLGMVGIGLNV

Query:  VIFIYTSMSAWSIRRFDEKWELASLSVLPIVTLLGLISFCLLLFALWPIWGFLTIPLLFTLFMACMVVFPNIMIGKFR---PQSDVLRTD
        VIFIYTSMSAWSIRRF+EKWE+ASLSVLPI TLLGLISFCLL FALWPIWGFLTIPLLFTLFMACMVVFP+I+IGKFR   PQSDVLRTD
Subjt:  VIFIYTSMSAWSIRRFDEKWELASLSVLPIVTLLGLISFCLLLFALWPIWGFLTIPLLFTLFMACMVVFPNIMIGKFR---PQSDVLRTD

A0A6J1KWX9 uncharacterized protein LOC1114983223.6e-9291.98Show/hide
Query:  MSGGTPVAGGYMRQRHSQGYASSGDDVEDDACSRFQTMSFHTPKSRTWIEVVENVLWLASAAFIVYYGDRHSNMVYLLWHDGRIRRLPLYLGMVGIGLNV
        MSGGTPVAGGYMRQRHSQGYASSGDD+EDDACSRFQTMSF TPKSRTWIEVVEN+LWLASAAFIVYYGDR+SNM+YLLWHDGRIRR PLY GMVGIGLN 
Subjt:  MSGGTPVAGGYMRQRHSQGYASSGDDVEDDACSRFQTMSFHTPKSRTWIEVVENVLWLASAAFIVYYGDRHSNMVYLLWHDGRIRRLPLYLGMVGIGLNV

Query:  VIFIYTSMSAWSIRRFDEKWELASLSVLPIVTLLGLISFCLLLFALWPIWGFLTIPLLFTLFMACMVVFPNIMIGKFRPQSDVLRTD
        VIFIYTSMSAWSIRRFDEKWELASLSVLPIVTLLGLISFCLL FALWPIWGFLTIPLLFT+FMA MVVFPNIMIGKF PQS V R D
Subjt:  VIFIYTSMSAWSIRRFDEKWELASLSVLPIVTLLGLISFCLLLFALWPIWGFLTIPLLFTLFMACMVVFPNIMIGKFRPQSDVLRTD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G20120.1 unknown protein1.2e-7671.28Show/hide
Query:  MSGGTPV-AGGYMRQRHSQGYASSGDDVEDDACSRFQTMSFHTPKSRTWIEVVENVLWLASAAFIVYYGDRHSNMVYLLWHDGRIRRLPLYLGMVGIGLN
        MSGGTPV  GGY+RQRHSQGYAS GDD+EDDACSR Q  S   P+S+TW+E++ENVLW+ASA FIVY+GDRHSNM+++L  D RI+R+PLY GM+GI +N
Subjt:  MSGGTPV-AGGYMRQRHSQGYASSGDDVEDDACSRFQTMSFHTPKSRTWIEVVENVLWLASAAFIVYYGDRHSNMVYLLWHDGRIRRLPLYLGMVGIGLN

Query:  VVIFIYTSMSAWSIRRFDEKWELASLSVLPIVTLLGLISFCLLLFALWPIWGFLTIPLLFTLFMACMVVFPNIMIGKFRPQSDVLRTD
        ++I IY SM +WS+RRFDEKWEL S+S LP +TLLG+ISF LL FALWPIWGFLT+PLLFTLFMAC+VVFP++MI KFRPQ+D LR D
Subjt:  VVIFIYTSMSAWSIRRFDEKWELASLSVLPIVTLLGLISFCLLLFALWPIWGFLTIPLLFTLFMACMVVFPNIMIGKFRPQSDVLRTD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGGAGGAACACCCGTAGCGGGTGGTTATATGAGGCAGAGGCATAGCCAGGGATATGCTTCTAGTGGTGATGATGTTGAGGATGATGCATGTTCGAGGTTTCAAAC
TATGTCGTTTCATACTCCAAAAAGTCGGACGTGGATTGAAGTTGTAGAGAATGTCCTTTGGCTTGCTTCTGCTGCTTTCATTGTATACTATGGCGATAGGCATTCCAATA
TGGTATATCTCTTGTGGCATGATGGCCGAATAAGAAGACTTCCTTTATACCTTGGAATGGTGGGGATCGGTTTGAATGTTGTCATCTTCATTTACACAAGTATGTCAGCC
TGGAGCATTAGAAGGTTTGATGAAAAATGGGAACTAGCAAGCTTATCAGTTTTACCAATTGTAACACTTCTTGGGCTTATCTCCTTTTGCTTGTTGTTATTTGCTCTTTG
GCCAATATGGGGTTTCCTGACCATTCCTCTTCTGTTCACTTTGTTCATGGCATGCATGGTTGTATTTCCCAATATAATGATCGGAAAATTTAGGCCTCAGAGTGATGTTC
TCCGTACAGATTAA
mRNA sequenceShow/hide mRNA sequence
AAGTCTTCAATTACGGAAACAATTAATGCTGGCAATTTCCCATTAGAATTTAGAACGGCAAAAAAGAGAAATAAAATAAAATTCTTAGAAGTGTGCAAAAGGAAAGGCAT
TTTAGAAGAAGAATTATCTCGCACGATTCAAAACCCATATTCTTTAGCTTCTTTCTTTCACGCAACGAATAACCCCTTCACTCCATCATCATCCCCATCAAAATCCTAAC
ATTCTGTTTTACAGATCTCTATCATCGTCATCACCCCAACAAGAAGAAGAAGAAGAAGCAAGTTCGCAGTGAATAGCGAATATTCTCTAATATACCCTTTCTTGGTTTCT
TATATTCCACAGGGCTGCTCGGTTTTTCTCCATTCAATACTAAAATTTACAAAACGAAGGAAATTGCATTGTGGGTATTGAAGCGTTTTTGAAGTCCAATCGTGGGTTAT
AGAGAATTTGAAGTCTTTGTTTCTGTAGGAGGGTTGGAATACGAAGAACCCCAGGTGGGGTTTGTTGCAAATATTCATTTCGAGGATCTTTGATTCTTTTCAGCGACACT
AACTCGATTGGAATTGGTACTTTTTCCATAATCTTGTGTCAATCAATTCGTGAGTTCTTTGATTTGAAGTGACAGTTCTGTAGCTTTTAATCTTGATACATTTGAATCTC
GGAGGTCATAGGTGGAGTTTAATCTGAGTGGTAATGCAGTAAAGTTATATGGGGAATTGAAATTGGATAGATTTCGAGTTGGAAGAGGTGTTTTTTTGTTTCCTCTATGT
CTATTGCTTAGCTTTAATTTGTGTATAACTATGTCGGGAGGAACACCCGTAGCGGGTGGTTATATGAGGCAGAGGCATAGCCAGGGATATGCTTCTAGTGGTGATGATGT
TGAGGATGATGCATGTTCGAGGTTTCAAACTATGTCGTTTCATACTCCAAAAAGTCGGACGTGGATTGAAGTTGTAGAGAATGTCCTTTGGCTTGCTTCTGCTGCTTTCA
TTGTATACTATGGCGATAGGCATTCCAATATGGTATATCTCTTGTGGCATGATGGCCGAATAAGAAGACTTCCTTTATACCTTGGAATGGTGGGGATCGGTTTGAATGTT
GTCATCTTCATTTACACAAGTATGTCAGCCTGGAGCATTAGAAGGTTTGATGAAAAATGGGAACTAGCAAGCTTATCAGTTTTACCAATTGTAACACTTCTTGGGCTTAT
CTCCTTTTGCTTGTTGTTATTTGCTCTTTGGCCAATATGGGGTTTCCTGACCATTCCTCTTCTGTTCACTTTGTTCATGGCATGCATGGTTGTATTTCCCAATATAATGA
TCGGAAAATTTAGGCCTCAGAGTGATGTTCTCCGTACAGATTAACGAACTCGATCAAAGTGATGCATAGATGAAAAGATCGATTTTAAAGCACAGATGATTGGTTGGATT
GGCTTGAGATAAAAGAAGGTTTGATTTGGATGGCATAATTCATCCCTACCATGATTCTCCATAAGCCAACTGTCTTCTCCTCAATTGATTCAAATTCCGACGTTGCCAGA
ATTCTGGCATTCGCTATTTTGATATGACCACAACCGGAGCATTATTCTTATATCGTTACATCTTCTGTTAGCAAAGTACATTAACTTTGTTAAGTAGTTTAGTTGCCTCA
TTTTTTTCATTGGAAAGTAGGCGTGTGGCGTGCCTTATTATTCATGTAGGCAATTCATTTCATTTTAGTATCTTCTTTTGTGATAAATTTGTTTGTGTTTGTAAGCTAAC
ATAACTTCACTGGCATCCTTAGCACAAGGAAAGGGAAAAAAAGAGAGTCTCATTAGACAATATGAAGTGGTTGAGTTTGGTAGGACTGTAAAGTTTTGGGAAAATACTGT
TTCAGTGAAGTTACTTGAATGAATGATCTCTTGAGCA
Protein sequenceShow/hide protein sequence
MSGGTPVAGGYMRQRHSQGYASSGDDVEDDACSRFQTMSFHTPKSRTWIEVVENVLWLASAAFIVYYGDRHSNMVYLLWHDGRIRRLPLYLGMVGIGLNVVIFIYTSMSA
WSIRRFDEKWELASLSVLPIVTLLGLISFCLLLFALWPIWGFLTIPLLFTLFMACMVVFPNIMIGKFRPQSDVLRTD