; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi06G009560 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G009560
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRibosome biogenesis regulatory protein
Genome locationchr06:19480714..19483922
RNA-Seq ExpressionLsi06G009560
SyntenyLsi06G009560
Gene Ontology termsGO:0000055 - ribosomal large subunit export from nucleus (biological process)
GO:0000447 - endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0042273 - ribosomal large subunit biogenesis (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0030687 - preribosome, large subunit precursor (cellular component)
InterPro domainsIPR007023 - Ribosomal biogenesis regulatory protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589856.1 Ribosome biogenesis regulatory protein-like protein, partial [Cucurbita argyrosperma subsp. sororia]2.9e-12273.86Show/hide
Query:  METQQQVQVDIGHLMALNPHHNLISPPSSREELVNECIQKGTELVQAIANELFFLPSTEDRDGPLVELPPPKTRLPREKHLPRPNPPTKWELFAKKKGIK
        MET Q+V VDIGHLMA NPHH+  SPPSSREELVNEC+QKGTELVQAIANELF LPSTEDRDGPLV+L  PKT+LPREK LP+P  PTKWELFAKK+GIK
Subjt:  METQQQVQVDIGHLMALNPHHNLISPPSSREELVNECIQKGTELVQAIANELFFLPSTEDRDGPLVELPPPKTRLPREKHLPRPNPPTKWELFAKKKGIK

Query:  IIKRGKNVFDEQTCTWKRRYGYDRANDEKNIPIIASKMTDEPGVDPFAERQAKKRQRIEKQEKNRLQNLKQAAKIGALPSHVQLAATALPITGTQAATKK
          K+ K ++DEQT TWKRR+GYDRANDE+NIPII +KMTDEPGVDPFA+R+  KR+R+EKQE NRLQNLKQAAK+GALPSHVQLAATALPITGTQA TKK
Subjt:  IIKRGKNVFDEQTCTWKRRYGYDRANDEKNIPIIASKMTDEPGVDPFAERQAKKRQRIEKQEKNRLQNLKQAAKIGALPSHVQLAATALPITGTQAATKK

Query:  ITKDELGH---------------------------------FLPAVEGMGVGSQEKEQTEKVLNRLISKNSHEILNINKAVNMCNVKREKRRTHEGRKPS
        ITKDELG+                                 FLP VEG GVGS+E+EQTEKVLNRLISKNSHEILNINKAVNM NVKREKRR H+ RKPS
Subjt:  ITKDELGH---------------------------------FLPAVEGMGVGSQEKEQTEKVLNRLISKNSHEILNINKAVNMCNVKREKRRTHEGRKPS

Query:  SSTSNKLKPNKKLQKKSLKKGPSKKGKAK
        SSTS+KLK NKKLQKK LKKG SKKG+AK
Subjt:  SSTSNKLKPNKKLQKKSLKKGPSKKGKAK

XP_022144805.1 ribosome biogenesis regulatory protein homolog [Momordica charantia]1.3e-12574.47Show/hide
Query:  METQQQVQVDIGHLMALNPHHNLISPPSSREELVNECIQKGTELVQAIANELFFLPSTEDRDGPLVELPPPKTRLPREKHLPRPNPPTKWELFAKKKGIK
        ME QQQ+QVD+GHLMA NPHH+L SPPSSREELVNEC+QKGTELVQAIANELF LPSTEDRDGPLV LPPPKTRLPREKHLP+P PPTKWELFAKK+GIK
Subjt:  METQQQVQVDIGHLMALNPHHNLISPPSSREELVNECIQKGTELVQAIANELFFLPSTEDRDGPLVELPPPKTRLPREKHLPRPNPPTKWELFAKKKGIK

Query:  IIKRGKNVFDEQTCTWKRRYGYDRANDEKNIPIIASKMTDEPGVDPFAERQAKKRQRIEKQEKNRLQNLKQAAKIGALPSHVQLAATALPITGTQAATKK
          K+ K  +DEQT TWKRR+GYDRANDE+NIPII +KMTDEPG+DPFAERQ+ KR+R+EKQE NRLQNLKQAAK+GALPSHVQLAATALPITGTQ A KK
Subjt:  IIKRGKNVFDEQTCTWKRRYGYDRANDEKNIPIIASKMTDEPGVDPFAERQAKKRQRIEKQEKNRLQNLKQAAKIGALPSHVQLAATALPITGTQAATKK

Query:  ITKDELGH---------------------------------FLPAVEGMGVGSQEKEQTEKVLNRLISKNSHEILNINKAVNMCNVKREKRRTHEGRKPS
        +TKDELG+                                 FLP VEG GVGS+E+EQTE VLNRLISKNSHEILN+NKA+NM NVKREKRR H+G KPS
Subjt:  ITKDELGH---------------------------------FLPAVEGMGVGSQEKEQTEKVLNRLISKNSHEILNINKAVNMCNVKREKRRTHEGRKPS

Query:  SSTSNKLKPNKKLQKKSLKKGPSKKGKAK
        SSTS+KLKPNKK QKKS+KKG S KGKAK
Subjt:  SSTSNKLKPNKKLQKKSLKKGPSKKGKAK

XP_022961058.1 ribosome biogenesis regulatory protein homolog [Cucurbita moschata]6.2e-12575.08Show/hide
Query:  METQQQVQVDIGHLMALNPHHNLISPPSSREELVNECIQKGTELVQAIANELFFLPSTEDRDGPLVELPPPKTRLPREKHLPRPNPPTKWELFAKKKGIK
        MET Q+VQVDIGHLMA NPHH+  SPPSSREELVNEC+QKGTELVQAIANELF LPSTEDRDGPLV+L  PKT+LPREK LP+P  PTKWELFAKK+GIK
Subjt:  METQQQVQVDIGHLMALNPHHNLISPPSSREELVNECIQKGTELVQAIANELFFLPSTEDRDGPLVELPPPKTRLPREKHLPRPNPPTKWELFAKKKGIK

Query:  IIKRGKNVFDEQTCTWKRRYGYDRANDEKNIPIIASKMTDEPGVDPFAERQAKKRQRIEKQEKNRLQNLKQAAKIGALPSHVQLAATALPITGTQAATKK
          K+ K ++DEQT TWKRR+GYDRANDE+NIPII +KMTDEPGVDPFA+RQ  KR+R+EKQE NRLQNLKQAAK+GALPSHVQLAATALPITGTQAATKK
Subjt:  IIKRGKNVFDEQTCTWKRRYGYDRANDEKNIPIIASKMTDEPGVDPFAERQAKKRQRIEKQEKNRLQNLKQAAKIGALPSHVQLAATALPITGTQAATKK

Query:  ITKDELGH---------------------------------FLPAVEGMGVGSQEKEQTEKVLNRLISKNSHEILNINKAVNMCNVKREKRRTHEGRKPS
        ITKDELG+                                 FLP VEG GVGS+E+EQTEKVLNRLISKNSHEILNINKAVNM NVKREKRR H+ RKPS
Subjt:  ITKDELGH---------------------------------FLPAVEGMGVGSQEKEQTEKVLNRLISKNSHEILNINKAVNMCNVKREKRRTHEGRKPS

Query:  SSTSNKLKPNKKLQKKSLKKGPSKKGKAK
        SSTS+KLKPNKKLQKK LKKG SKKG+AK
Subjt:  SSTSNKLKPNKKLQKKSLKKGPSKKGKAK

XP_022987784.1 ribosome biogenesis regulatory protein homolog [Cucurbita maxima]2.0e-12374.16Show/hide
Query:  METQQQVQVDIGHLMALNPHHNLISPPSSREELVNECIQKGTELVQAIANELFFLPSTEDRDGPLVELPPPKTRLPREKHLPRPNPPTKWELFAKKKGIK
        MET Q+VQVDIGHLMA +PHH+  SPP +REELVNEC+QKGTELVQAIANELF LPSTEDRDGPLV+L  PKT+LPREK LP+P  PTKWELFAKK+GIK
Subjt:  METQQQVQVDIGHLMALNPHHNLISPPSSREELVNECIQKGTELVQAIANELFFLPSTEDRDGPLVELPPPKTRLPREKHLPRPNPPTKWELFAKKKGIK

Query:  IIKRGKNVFDEQTCTWKRRYGYDRANDEKNIPIIASKMTDEPGVDPFAERQAKKRQRIEKQEKNRLQNLKQAAKIGALPSHVQLAATALPITGTQAATKK
          K+ K ++DEQT TWKRR+GYDRANDE+NIPII +KMTDEPGVDPFA+RQ  KR+R+EKQE NRLQNLKQAAK+GALPSHVQLAATALPITGTQA TKK
Subjt:  IIKRGKNVFDEQTCTWKRRYGYDRANDEKNIPIIASKMTDEPGVDPFAERQAKKRQRIEKQEKNRLQNLKQAAKIGALPSHVQLAATALPITGTQAATKK

Query:  ITKDELGH---------------------------------FLPAVEGMGVGSQEKEQTEKVLNRLISKNSHEILNINKAVNMCNVKREKRRTHEGRKPS
        ITKDELG+                                 FLP VEG GVGS+E+EQTEKVLNRLISKNSHEILNINKAVNM NVKREKRR H+ RKPS
Subjt:  ITKDELGH---------------------------------FLPAVEGMGVGSQEKEQTEKVLNRLISKNSHEILNINKAVNMCNVKREKRRTHEGRKPS

Query:  SSTSNKLKPNKKLQKKSLKKGPSKKGKAK
        SSTS+KLKPNKKLQKK LKKG SKKGKAK
Subjt:  SSTSNKLKPNKKLQKKSLKKGPSKKGKAK

XP_023515967.1 ribosome biogenesis regulatory protein homolog isoform X1 [Cucurbita pepo subsp. pepo]2.4e-12474.47Show/hide
Query:  METQQQVQVDIGHLMALNPHHNLISPPSSREELVNECIQKGTELVQAIANELFFLPSTEDRDGPLVELPPPKTRLPREKHLPRPNPPTKWELFAKKKGIK
        MET Q+VQVDIGHLMA NPHH+  SPPSSREELVNEC+QKGTELVQAIANELF LPSTEDRDGPLV+L  PKT+LPREK LP+P  PTKWELFAKK+GIK
Subjt:  METQQQVQVDIGHLMALNPHHNLISPPSSREELVNECIQKGTELVQAIANELFFLPSTEDRDGPLVELPPPKTRLPREKHLPRPNPPTKWELFAKKKGIK

Query:  IIKRGKNVFDEQTCTWKRRYGYDRANDEKNIPIIASKMTDEPGVDPFAERQAKKRQRIEKQEKNRLQNLKQAAKIGALPSHVQLAATALPITGTQAATKK
          K+ K ++DEQT TWKRR+GYDRANDE+NIPII +KMTDEPGVDPFA+RQ  KR+R+EKQE NRLQNLKQAAK+GALPSHVQLAATALPITGTQA TKK
Subjt:  IIKRGKNVFDEQTCTWKRRYGYDRANDEKNIPIIASKMTDEPGVDPFAERQAKKRQRIEKQEKNRLQNLKQAAKIGALPSHVQLAATALPITGTQAATKK

Query:  ITKDELGH---------------------------------FLPAVEGMGVGSQEKEQTEKVLNRLISKNSHEILNINKAVNMCNVKREKRRTHEGRKPS
        ITKDELG+                                 FLP VEG GVGS+E+EQTEKVLNRLISKNSHEILN+NKAVNM NVKREKRR H+ RKPS
Subjt:  ITKDELGH---------------------------------FLPAVEGMGVGSQEKEQTEKVLNRLISKNSHEILNINKAVNMCNVKREKRRTHEGRKPS

Query:  SSTSNKLKPNKKLQKKSLKKGPSKKGKAK
        SSTS+KLKPNKKLQKK LKKG SKKG+AK
Subjt:  SSTSNKLKPNKKLQKKSLKKGPSKKGKAK

TrEMBL top hitse value%identityAlignment
A0A0A0LZY0 Ribosome biogenesis regulatory protein5.3e-11469Show/hide
Query:  METQQQVQVDIGHLMALNPHHNLISPPSSREELVNECIQKGTELVQAIANELFFLPSTEDRDGPLVELPPPKTRLPREKHLPRPNPPTKWELFAKKKGIK
        +E Q   Q+D+GHLMA NPHH   S PSSRE+LV+EC+QKGTELVQ+IAN+LF LPSTEDRDGPLV LPPP TRLPREK LP+P PPTKWELFA+KKGIK
Subjt:  METQQQVQVDIGHLMALNPHHNLISPPSSREELVNECIQKGTELVQAIANELFFLPSTEDRDGPLVELPPPKTRLPREKHLPRPNPPTKWELFAKKKGIK

Query:  IIKRGKNVFDEQTCTWKRRYGYDRANDEKNIPIIASKMTDEPGVDPFAERQAKKRQRIEKQEKNRLQNLKQAAKIGALPSHVQLAATALPITGTQAATKK
          K+ K V+DEQT TWKRR+GYDRANDE NIPII +KMTDE G DPFA R+A K++R+EKQEKNRLQNLKQAAK+GALPSH+QLAATALPITGTQAA KK
Subjt:  IIKRGKNVFDEQTCTWKRRYGYDRANDEKNIPIIASKMTDEPGVDPFAERQAKKRQRIEKQEKNRLQNLKQAAKIGALPSHVQLAATALPITGTQAATKK

Query:  ITKDELGH---------------------------------FLPAVEGMGVGSQEKEQTEKVLNRLISKNSHEILNINKAVNMCNVKREKRRTHEGRKPS
        ITKDELG+                                 FLP VEG G+GS+E+EQTEKVL+RLISKNSHEILN+NKAVNM NVK+EK++ ++G+  S
Subjt:  ITKDELGH---------------------------------FLPAVEGMGVGSQEKEQTEKVLNRLISKNSHEILNINKAVNMCNVKREKRRTHEGRKPS

Query:  SSTSNKLKPNKKLQKKSLKKGPSKKGKAK
        SS S+KLKPNKKLQKK LKKG SK+GKAK
Subjt:  SSTSNKLKPNKKLQKKSLKKGPSKKGKAK

A0A6J1CSP0 Ribosome biogenesis regulatory protein6.1e-12674.47Show/hide
Query:  METQQQVQVDIGHLMALNPHHNLISPPSSREELVNECIQKGTELVQAIANELFFLPSTEDRDGPLVELPPPKTRLPREKHLPRPNPPTKWELFAKKKGIK
        ME QQQ+QVD+GHLMA NPHH+L SPPSSREELVNEC+QKGTELVQAIANELF LPSTEDRDGPLV LPPPKTRLPREKHLP+P PPTKWELFAKK+GIK
Subjt:  METQQQVQVDIGHLMALNPHHNLISPPSSREELVNECIQKGTELVQAIANELFFLPSTEDRDGPLVELPPPKTRLPREKHLPRPNPPTKWELFAKKKGIK

Query:  IIKRGKNVFDEQTCTWKRRYGYDRANDEKNIPIIASKMTDEPGVDPFAERQAKKRQRIEKQEKNRLQNLKQAAKIGALPSHVQLAATALPITGTQAATKK
          K+ K  +DEQT TWKRR+GYDRANDE+NIPII +KMTDEPG+DPFAERQ+ KR+R+EKQE NRLQNLKQAAK+GALPSHVQLAATALPITGTQ A KK
Subjt:  IIKRGKNVFDEQTCTWKRRYGYDRANDEKNIPIIASKMTDEPGVDPFAERQAKKRQRIEKQEKNRLQNLKQAAKIGALPSHVQLAATALPITGTQAATKK

Query:  ITKDELGH---------------------------------FLPAVEGMGVGSQEKEQTEKVLNRLISKNSHEILNINKAVNMCNVKREKRRTHEGRKPS
        +TKDELG+                                 FLP VEG GVGS+E+EQTE VLNRLISKNSHEILN+NKA+NM NVKREKRR H+G KPS
Subjt:  ITKDELGH---------------------------------FLPAVEGMGVGSQEKEQTEKVLNRLISKNSHEILNINKAVNMCNVKREKRRTHEGRKPS

Query:  SSTSNKLKPNKKLQKKSLKKGPSKKGKAK
        SSTS+KLKPNKK QKKS+KKG S KGKAK
Subjt:  SSTSNKLKPNKKLQKKSLKKGPSKKGKAK

A0A6J1HAS5 Ribosome biogenesis regulatory protein3.0e-12575.08Show/hide
Query:  METQQQVQVDIGHLMALNPHHNLISPPSSREELVNECIQKGTELVQAIANELFFLPSTEDRDGPLVELPPPKTRLPREKHLPRPNPPTKWELFAKKKGIK
        MET Q+VQVDIGHLMA NPHH+  SPPSSREELVNEC+QKGTELVQAIANELF LPSTEDRDGPLV+L  PKT+LPREK LP+P  PTKWELFAKK+GIK
Subjt:  METQQQVQVDIGHLMALNPHHNLISPPSSREELVNECIQKGTELVQAIANELFFLPSTEDRDGPLVELPPPKTRLPREKHLPRPNPPTKWELFAKKKGIK

Query:  IIKRGKNVFDEQTCTWKRRYGYDRANDEKNIPIIASKMTDEPGVDPFAERQAKKRQRIEKQEKNRLQNLKQAAKIGALPSHVQLAATALPITGTQAATKK
          K+ K ++DEQT TWKRR+GYDRANDE+NIPII +KMTDEPGVDPFA+RQ  KR+R+EKQE NRLQNLKQAAK+GALPSHVQLAATALPITGTQAATKK
Subjt:  IIKRGKNVFDEQTCTWKRRYGYDRANDEKNIPIIASKMTDEPGVDPFAERQAKKRQRIEKQEKNRLQNLKQAAKIGALPSHVQLAATALPITGTQAATKK

Query:  ITKDELGH---------------------------------FLPAVEGMGVGSQEKEQTEKVLNRLISKNSHEILNINKAVNMCNVKREKRRTHEGRKPS
        ITKDELG+                                 FLP VEG GVGS+E+EQTEKVLNRLISKNSHEILNINKAVNM NVKREKRR H+ RKPS
Subjt:  ITKDELGH---------------------------------FLPAVEGMGVGSQEKEQTEKVLNRLISKNSHEILNINKAVNMCNVKREKRRTHEGRKPS

Query:  SSTSNKLKPNKKLQKKSLKKGPSKKGKAK
        SSTS+KLKPNKKLQKK LKKG SKKG+AK
Subjt:  SSTSNKLKPNKKLQKKSLKKGPSKKGKAK

A0A6J1HW20 Ribosome biogenesis regulatory protein7.0e-11469Show/hide
Query:  METQQQVQVDIGHLMALNPHHNLISPPSSREELVNECIQKGTELVQAIANELFFLPSTEDRDGPLVELPPPKTRLPREKHLPRPNPPTKWELFAKKKGIK
        ME QQ  Q+D+G+LMA NPHH   S  SSRE+LV+EC+QKG EL Q IAN+LF LPSTEDRDGPLV LPPP TRLPREK LP+P PPTKWELFAKK+GIK
Subjt:  METQQQVQVDIGHLMALNPHHNLISPPSSREELVNECIQKGTELVQAIANELFFLPSTEDRDGPLVELPPPKTRLPREKHLPRPNPPTKWELFAKKKGIK

Query:  IIKRGKNVFDEQTCTWKRRYGYDRANDEKNIPIIASKMTDEPGVDPFAERQAKKRQRIEKQEKNRLQNLKQAAKIGALPSHVQLAATALPITGTQAATKK
          K+ K V+D+QT +WKRR+GYDRANDE+NIPII +KMTDEPGVDPFA R+A K+ R+EKQE+N+LQNLKQAAK+GALPSHVQLAATALPITGTQAA KK
Subjt:  IIKRGKNVFDEQTCTWKRRYGYDRANDEKNIPIIASKMTDEPGVDPFAERQAKKRQRIEKQEKNRLQNLKQAAKIGALPSHVQLAATALPITGTQAATKK

Query:  ITKDELGH---------------------------------FLPAVEGMGVGSQEKEQTEKVLNRLISKNSHEILNINKAVNMCNVKREKRRTHEGRKPS
        ITKDELG+                                 FLP VEG G+GSQE+EQTEKVLNRLISKNSHEILNINKAVNM NVK+EK++ ++  K S
Subjt:  ITKDELGH---------------------------------FLPAVEGMGVGSQEKEQTEKVLNRLISKNSHEILNINKAVNMCNVKREKRRTHEGRKPS

Query:  SSTSNKLKPNKKLQKKSLKKGPSKKGKAK
        S +SNKLKPNKKLQKK LKKG SK GKAK
Subjt:  SSTSNKLKPNKKLQKKSLKKGPSKKGKAK

A0A6J1JJT9 Ribosome biogenesis regulatory protein9.7e-12474.16Show/hide
Query:  METQQQVQVDIGHLMALNPHHNLISPPSSREELVNECIQKGTELVQAIANELFFLPSTEDRDGPLVELPPPKTRLPREKHLPRPNPPTKWELFAKKKGIK
        MET Q+VQVDIGHLMA +PHH+  SPP +REELVNEC+QKGTELVQAIANELF LPSTEDRDGPLV+L  PKT+LPREK LP+P  PTKWELFAKK+GIK
Subjt:  METQQQVQVDIGHLMALNPHHNLISPPSSREELVNECIQKGTELVQAIANELFFLPSTEDRDGPLVELPPPKTRLPREKHLPRPNPPTKWELFAKKKGIK

Query:  IIKRGKNVFDEQTCTWKRRYGYDRANDEKNIPIIASKMTDEPGVDPFAERQAKKRQRIEKQEKNRLQNLKQAAKIGALPSHVQLAATALPITGTQAATKK
          K+ K ++DEQT TWKRR+GYDRANDE+NIPII +KMTDEPGVDPFA+RQ  KR+R+EKQE NRLQNLKQAAK+GALPSHVQLAATALPITGTQA TKK
Subjt:  IIKRGKNVFDEQTCTWKRRYGYDRANDEKNIPIIASKMTDEPGVDPFAERQAKKRQRIEKQEKNRLQNLKQAAKIGALPSHVQLAATALPITGTQAATKK

Query:  ITKDELGH---------------------------------FLPAVEGMGVGSQEKEQTEKVLNRLISKNSHEILNINKAVNMCNVKREKRRTHEGRKPS
        ITKDELG+                                 FLP VEG GVGS+E+EQTEKVLNRLISKNSHEILNINKAVNM NVKREKRR H+ RKPS
Subjt:  ITKDELGH---------------------------------FLPAVEGMGVGSQEKEQTEKVLNRLISKNSHEILNINKAVNMCNVKREKRRTHEGRKPS

Query:  SSTSNKLKPNKKLQKKSLKKGPSKKGKAK
        SSTS+KLKPNKKLQKK LKKG SKKGKAK
Subjt:  SSTSNKLKPNKKLQKKSLKKGPSKKGKAK

SwissProt top hitse value%identityAlignment
A1A5P2 Ribosome biogenesis regulatory protein homolog1.5e-2031.67Show/hide
Query:  QVQVDIGHLMA--LNPHHNLISPPSSREELVNECIQKGTELVQAIANELFFLPSTEDRDGPLVELPPPKTRLPREKHLPRPNPPTKWELFAKKKGIKIIK
        +++ D+G+L+A   NP   L     S E  +    +  T+L   + N+L+ LP+    +  +  LP P TRLPREK LPRP P T+W+ FA+ KGI+  K
Subjt:  QVQVDIGHLMA--LNPHHNLISPPSSREELVNECIQKGTELVQAIANELFFLPSTEDRDGPLVELPPPKTRLPREKHLPRPNPPTKWELFAKKKGIKIIK

Query:  RGKNVFDEQTCTWKRRYGYDRANDEKNIPIIASKMTDEPGVDPFAERQAKKRQRIEKQEKNRLQNLKQAAKIGALPSHVQLAAT---ALPITGTQAATKK
        +   V+DE +  W+RR+GY RA D+    +I    + +P  D FA+R   K++R+ K E NRL+NL +A K+  +PS   L  T   +    G      K
Subjt:  RGKNVFDEQTCTWKRRYGYDRANDEKNIPIIASKMTDEPGVDPFAERQAKKRQRIEKQEKNRLQNLKQAAKIGALPSHVQLAAT---ALPITGTQAATKK

Query:  ITKDELGHF---LPAVEGMGVGSQEKEQTEKVLNRLIS--KNSHEILNI-NKAVNMCNVKREKRRTHEGRKPSSSTSNKLKPNKKLQKKSLKKGPSKKGK
        ++   +G F   LP  E    GS +K + + +     +  KN  E+L + N      +V R   +     +     + + K ++K +KK  ++GPS + K
Subjt:  ITKDELGHF---LPAVEGMGVGSQEKEQTEKVLNRLIS--KNSHEILNI-NKAVNMCNVKREKRRTHEGRKPSSSTSNKLKPNKKLQKKSLKKGPSKKGK

Q15050 Ribosome biogenesis regulatory protein homolog8.7e-2133.78Show/hide
Query:  QVQVDIGHLMA--LNPHHNLISPPSSREELVNECIQKGTELVQAIANELFFLPSTEDRDGPLVELPPPKTRLPREKHLPRPNPPTKWELFAKKKGIKIIK
        ++Q D+G+L+A   NP   L     + E  +    +  T+L   + N+L+ LP+    +  +  LP P TRLPREK LPRP P T+W+ FA+ KGI+  K
Subjt:  QVQVDIGHLMA--LNPHHNLISPPSSREELVNECIQKGTELVQAIANELFFLPSTEDRDGPLVELPPPKTRLPREKHLPRPNPPTKWELFAKKKGIKIIK

Query:  RGKNVFDEQTCTWKRRYGYDRANDEKNIPIIASKMTDEPGVDPFAERQAKKRQRIEKQEKNRLQNLKQAAKIGALPSHVQLAATALPITGTQAATKKITK
        +   V+DE +  W+RR+GY RA D+    +I      +P  D FA+R   K++R+ K E NRL+NL +A K+  LPS     A  L  TG Q      +K
Subjt:  RGKNVFDEQTCTWKRRYGYDRANDEKNIPIIASKMTDEPGVDPFAERQAKKRQRIEKQEKNRLQNLKQAAKIGALPSHVQLAATALPITGTQAATKKITK

Query:  DELGHFLPA--VEGMGVGS-QEKEQTEKVLNRLISKNSHEILNINKAVNMCNVKREKRRTHEGRKPS---SSTSNKLKPNKKLQKKSLKKGPSKKGKAK
        +ELG  +    V    VG  QE+   EKV      K   + L  + A    N + E  R    +KP    +  +NK    +  ++ + ++  S+KGK K
Subjt:  DELGHFLPA--VEGMGVGS-QEKEQTEKVLNRLISKNSHEILNINKAVNMCNVKREKRRTHEGRKPS---SSTSNKLKPNKKLQKKSLKKGPSKKGKAK

Q2KIH4 Ribosome biogenesis regulatory protein homolog1.6e-1932.11Show/hide
Query:  QVQVDIGHLMA--LNPHHNLISPPSSREELVNECIQKGTELVQAIANELFFLPSTEDRDGPLVELPPPKTRLPREKHLPRPNPPTKWELFAKKKGIKIIK
        +++ D+G+L+A   NP   L     ++E  +    +  T+L   + N+L+ LP+    +  +  LP P TRLPREK +PRP P T+W+ FA+ KGI+  K
Subjt:  QVQVDIGHLMA--LNPHHNLISPPSSREELVNECIQKGTELVQAIANELFFLPSTEDRDGPLVELPPPKTRLPREKHLPRPNPPTKWELFAKKKGIKIIK

Query:  RGKNVFDEQTCTWKRRYGYDRANDEKNIPIIASKMTDEPGVDPFAERQAKKRQRIEKQEKNRLQNLKQAAKIGALPSHVQLAATALPITGTQAATKKITK
        +   V+DE +  W+RR+GY RA D+    +I      +P  D FA+R   K++R+ K E NRL+NL +A K+  LPS     A  +  TG Q      +K
Subjt:  RGKNVFDEQTCTWKRRYGYDRANDEKNIPIIASKMTDEPGVDPFAERQAKKRQRIEKQEKNRLQNLKQAAKIGALPSHVQLAATALPITGTQAATKKITK

Query:  DELGHFLPA--VEGMGVGS-QEKEQTEKVLNRLISKNSHEILNINKAVNMCNVKREKRRTHEGRKPS---SSTSNKLKPNKKLQKKSLKKGPSKKGKAK
        +ELG  +    V    VG  QE+   EK       K   + L  + A      + E  R    +KP    +  +NK    +  ++ + ++  S+KGK K
Subjt:  DELGHFLPA--VEGMGVGS-QEKEQTEKVLNRLISKNSHEILNINKAVNMCNVKREKRRTHEGRKPS---SSTSNKLKPNKKLQKKSLKKGPSKKGKAK

Q9CYH6 Ribosome biogenesis regulatory protein homolog1.1e-2031.67Show/hide
Query:  QVQVDIGHLMA--LNPHHNLISPPSSREELVNECIQKGTELVQAIANELFFLPSTEDRDGPLVELPPPKTRLPREKHLPRPNPPTKWELFAKKKGIKIIK
        +++ D+G+L+A   NP   L     S E  +    +  T+L   + N+L+ LP+    +  +  LP P TRLPREK LPRP P T+W+ FA+ KGI+  K
Subjt:  QVQVDIGHLMA--LNPHHNLISPPSSREELVNECIQKGTELVQAIANELFFLPSTEDRDGPLVELPPPKTRLPREKHLPRPNPPTKWELFAKKKGIKIIK

Query:  RGKNVFDEQTCTWKRRYGYDRANDEKNIPIIASKMTDEPGVDPFAERQAKKRQRIEKQEKNRLQNLKQAAKIGALPSHVQLAAT---ALPITGTQAATKK
        +   V+DE +  W+RR+GY RA D+    +I    + +P  D FA+R   K++R+ K E NRL+NL +A K+  +PS   L  T   +    G      K
Subjt:  RGKNVFDEQTCTWKRRYGYDRANDEKNIPIIASKMTDEPGVDPFAERQAKKRQRIEKQEKNRLQNLKQAAKIGALPSHVQLAAT---ALPITGTQAATKK

Query:  ITKDELGHF---LPAVEGMGVGSQEKEQTEKVLNRLIS--KNSHEILNI-NKAVNMCNVKREKRRTHEGRKPSSSTSNKLKPNKKLQKKSLKKGPSKKGK
        ++   +G F   LP  E    GS +K + + +     +  KN  E+L + N      +V R   +     +     + + K ++K ++K  ++GPS K K
Subjt:  ITKDELGHF---LPAVEGMGVGSQEKEQTEKVLNRLIS--KNSHEILNI-NKAVNMCNVKREKRRTHEGRKPSSSTSNKLKPNKKLQKKSLKKGPSKKGK

Q9SH88 Ribosome biogenesis regulatory protein homolog8.6e-8555Show/hide
Query:  METQQQVQVDIGHLMALNPHHNLISPPSSREELVNECIQKGTELVQAIANELFFLPSTEDRDGPLVELPPPKTRLPREKHLPRPNPPTKWELFAKKKGIK
        MET+Q  QVD+G+L+A NP+H   S PSSR ELV E + +GT+LVQ IAN+LF  PSTE  DGP+V+LPPP T+LPREKH+PRP PPTKWE FA KKGI+
Subjt:  METQQQVQVDIGHLMALNPHHNLISPPSSREELVNECIQKGTELVQAIANELFFLPSTEDRDGPLVELPPPKTRLPREKHLPRPNPPTKWELFAKKKGIK

Query:  IIKRGKNVFDEQTCTWKRRYGYDRANDEKNIPIIASKMTDEPGVDPFAERQAKKRQRIEKQEKNRLQNLKQAAKIGALPSHVQLAATALPITGTQAATKK
          K+ K V+DEQT  +KRR+GYDR ND+ ++PII +K +DEPGVDPFA+R   K++R+ KQEKNRLQNLK A K GALPSHVQLAAT+LPI+GT+A  KK
Subjt:  IIKRGKNVFDEQTCTWKRRYGYDRANDEKNIPIIASKMTDEPGVDPFAERQAKKRQRIEKQEKNRLQNLKQAAKIGALPSHVQLAATALPITGTQAATKK

Query:  ITKDELG---------------------------------HFLPAVEGMGVGSQEKEQTEKVLNRLISKNSHEILNINKAVNMCNVKREKRRTHEGRKPS
        I KDELG                                  +LP V G G  + EKEQT  VL+++ SK+SHEILN+ KA+NM NVK+EK++        
Subjt:  ITKDELG---------------------------------HFLPAVEGMGVGSQEKEQTEKVLNRLISKNSHEILNINKAVNMCNVKREKRRTHEGRKPS

Query:  SSTSNKLKPNKKLQKKSLKK
        S  S+KLKP K + KK   K
Subjt:  SSTSNKLKPNKKLQKKSLKK

Arabidopsis top hitse value%identityAlignment
AT2G37990.1 ribosome biogenesis regulatory protein (RRS1) family protein6.1e-8655Show/hide
Query:  METQQQVQVDIGHLMALNPHHNLISPPSSREELVNECIQKGTELVQAIANELFFLPSTEDRDGPLVELPPPKTRLPREKHLPRPNPPTKWELFAKKKGIK
        MET+Q  QVD+G+L+A NP+H   S PSSR ELV E + +GT+LVQ IAN+LF  PSTE  DGP+V+LPPP T+LPREKH+PRP PPTKWE FA KKGI+
Subjt:  METQQQVQVDIGHLMALNPHHNLISPPSSREELVNECIQKGTELVQAIANELFFLPSTEDRDGPLVELPPPKTRLPREKHLPRPNPPTKWELFAKKKGIK

Query:  IIKRGKNVFDEQTCTWKRRYGYDRANDEKNIPIIASKMTDEPGVDPFAERQAKKRQRIEKQEKNRLQNLKQAAKIGALPSHVQLAATALPITGTQAATKK
          K+ K V+DEQT  +KRR+GYDR ND+ ++PII +K +DEPGVDPFA+R   K++R+ KQEKNRLQNLK A K GALPSHVQLAAT+LPI+GT+A  KK
Subjt:  IIKRGKNVFDEQTCTWKRRYGYDRANDEKNIPIIASKMTDEPGVDPFAERQAKKRQRIEKQEKNRLQNLKQAAKIGALPSHVQLAATALPITGTQAATKK

Query:  ITKDELG---------------------------------HFLPAVEGMGVGSQEKEQTEKVLNRLISKNSHEILNINKAVNMCNVKREKRRTHEGRKPS
        I KDELG                                  +LP V G G  + EKEQT  VL+++ SK+SHEILN+ KA+NM NVK+EK++        
Subjt:  ITKDELG---------------------------------HFLPAVEGMGVGSQEKEQTEKVLNRLISKNSHEILNINKAVNMCNVKREKRRTHEGRKPS

Query:  SSTSNKLKPNKKLQKKSLKK
        S  S+KLKP K + KK   K
Subjt:  SSTSNKLKPNKKLQKKSLKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGACCCAGCAGCAAGTTCAGGTCGACATTGGTCATCTCATGGCGCTCAATCCTCACCACAATCTTATTTCCCCGCCGTCCTCCAGGGAGGAGTTAGTGAATGAATG
CATACAGAAGGGTACGGAGCTAGTTCAAGCTATTGCGAATGAACTTTTCTTTCTGCCCTCAACTGAAGACAGAGATGGTCCTCTTGTGGAGTTGCCTCCACCTAAAACAA
GATTGCCTAGGGAGAAGCATCTTCCAAGGCCTAATCCTCCTACAAAATGGGAACTTTTTGCTAAAAAAAAAGGTATAAAGATCATAAAAAGAGGTAAGAATGTGTTTGAT
GAACAAACTTGTACATGGAAGCGTCGCTATGGTTATGATCGGGCAAATGATGAGAAGAACATACCCATCATTGCGTCCAAGATGACTGATGAGCCGGGTGTGGATCCCTT
TGCCGAGAGGCAAGCAAAAAAGAGGCAACGAATTGAAAAGCAAGAAAAGAATCGCTTACAGAATCTGAAACAAGCTGCAAAAATTGGTGCTTTGCCAAGCCACGTTCAAC
TAGCAGCAACTGCTTTGCCCATAACAGGGACACAAGCTGCAACAAAGAAAATCACAAAAGATGAGCTTGGACATTTTTTGCCTGCTGTGGAAGGAATGGGTGTTGGCTCT
CAAGAAAAGGAGCAAACTGAGAAAGTCCTGAACCGACTAATATCCAAGAATTCACATGAGATACTAAACATCAATAAGGCCGTCAACATGTGCAATGTGAAAAGAGAAAA
GAGGCGAACACATGAAGGCAGGAAGCCTTCATCATCAACATCGAACAAGTTGAAACCAAATAAGAAACTTCAAAAGAAGTCACTGAAGAAGGGACCATCGAAGAAGGGAA
AGGCAAAATGA
mRNA sequenceShow/hide mRNA sequence
CAATGCGAAAAACAAAGCTCATATAACGGCGTCATTCTGACTTCTCTTGTCCCACTCTTAAACCCTGTCTTCGGTATTTTCCTCTTTGGCCTGAGAAGTCTCTTGAATCG
GCCGGAGATGGAGACCCAGCAGCAAGTTCAGGTCGACATTGGTCATCTCATGGCGCTCAATCCTCACCACAATCTTATTTCCCCGCCGTCCTCCAGGGAGGAGTTAGTGA
ATGAATGCATACAGAAGGGTACGGAGCTAGTTCAAGCTATTGCGAATGAACTTTTCTTTCTGCCCTCAACTGAAGACAGAGATGGTCCTCTTGTGGAGTTGCCTCCACCT
AAAACAAGATTGCCTAGGGAGAAGCATCTTCCAAGGCCTAATCCTCCTACAAAATGGGAACTTTTTGCTAAAAAAAAAGGTATAAAGATCATAAAAAGAGGTAAGAATGT
GTTTGATGAACAAACTTGTACATGGAAGCGTCGCTATGGTTATGATCGGGCAAATGATGAGAAGAACATACCCATCATTGCGTCCAAGATGACTGATGAGCCGGGTGTGG
ATCCCTTTGCCGAGAGGCAAGCAAAAAAGAGGCAACGAATTGAAAAGCAAGAAAAGAATCGCTTACAGAATCTGAAACAAGCTGCAAAAATTGGTGCTTTGCCAAGCCAC
GTTCAACTAGCAGCAACTGCTTTGCCCATAACAGGGACACAAGCTGCAACAAAGAAAATCACAAAAGATGAGCTTGGACATTTTTTGCCTGCTGTGGAAGGAATGGGTGT
TGGCTCTCAAGAAAAGGAGCAAACTGAGAAAGTCCTGAACCGACTAATATCCAAGAATTCACATGAGATACTAAACATCAATAAGGCCGTCAACATGTGCAATGTGAAAA
GAGAAAAGAGGCGAACACATGAAGGCAGGAAGCCTTCATCATCAACATCGAACAAGTTGAAACCAAATAAGAAACTTCAAAAGAAGTCACTGAAGAAGGGACCATCGAAG
AAGGGAAAGGCAAAATGAAGTTATCCTTAGGATTTTAATTAGAGTTTTTTGTTCTACACTATCTTCTTTATGGAAGAAATTTTGCATTTGGCTATTTACGTATTAGCTAT
CTTCTCCATTTAAAGAACTAGAACTAGTGTATGTATATTTATTTATTCAAGTAAATAGTTTATTTATTTTTTTATATGTAATATTCATTAGGAATTTTTTAAAATAACGA
AATGTAATAGTTTAGTTTGTTTAGCCTTAGAAAAAAA
Protein sequenceShow/hide protein sequence
METQQQVQVDIGHLMALNPHHNLISPPSSREELVNECIQKGTELVQAIANELFFLPSTEDRDGPLVELPPPKTRLPREKHLPRPNPPTKWELFAKKKGIKIIKRGKNVFD
EQTCTWKRRYGYDRANDEKNIPIIASKMTDEPGVDPFAERQAKKRQRIEKQEKNRLQNLKQAAKIGALPSHVQLAATALPITGTQAATKKITKDELGHFLPAVEGMGVGS
QEKEQTEKVLNRLISKNSHEILNINKAVNMCNVKREKRRTHEGRKPSSSTSNKLKPNKKLQKKSLKKGPSKKGKAK