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Lsi06G009860 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G009860
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptioncucumber peeling cupredoxin-like
Genome locationchr06:19881593..19883313
RNA-Seq ExpressionLsi06G009860
SyntenyLsi06G009860
Gene Ontology termsGO:0046658 - anchored component of plasma membrane (cellular component)
GO:0009055 - electron transfer activity (molecular function)
InterPro domainsIPR008972 - Cupredoxin
IPR028871 - Blue (type 1) copper protein, binding site
IPR039391 - Phytocyanin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589838.1 hypothetical protein SDJN03_15261, partial [Cucurbita argyrosperma subsp. sororia]1.8e-3958.75Show/hide
Query:  VSTQKMSFFASLLFIVVLLQVVAAVDHRVGGNFG--------------------------FNSSANESHNYAIPESEAEFDRCVKPGIYFEKGIFPVLDR
        + + + SF ASLLFI  LL   AAVDHRVGG+FG                          FNSSAN++HNYA+PES+AEFD CVKPGI+FE  IF   DR
Subjt:  VSTQKMSFFASLLFIVVLLQVVAAVDHRVGGNFG--------------------------FNSSANESHNYAIPESEAEFDRCVKPGIYFEKGIFPVLDR

Query:  PGRKYFICNVGNHCNLGMKFAIDVLPIPGSMPPNAALKFAAFPALLLLFITILTNFFFFI
        PGRKYFICNVGNHCNLGMKFA+DVLP PG MPPN+ALK  A P L ++  TIL N  FFI
Subjt:  PGRKYFICNVGNHCNLGMKFAIDVLPIPGSMPPNAALKFAAFPALLLLFITILTNFFFFI

XP_004151459.1 umecyanin [Cucumis sativus]2.5e-4463.35Show/hide
Query:  MVSTQKMSFFASLLFIVVLLQVVAAVDHRVGGNFG--------------------------FNSSANESHNYAIPESEAEFDRCVKPGIYFEKGIFPVLD
        MVSTQK++F AS LFI VLL  VAAVD++VGG+FG                          FNSSANE+HNYA+P S+AE D CVKPGI F   +FPVLD
Subjt:  MVSTQKMSFFASLLFIVVLLQVVAAVDHRVGGNFG--------------------------FNSSANESHNYAIPESEAEFDRCVKPGIYFEKGIFPVLD

Query:  RPGRKYFICNVGNHCNLGMKFAIDVLPIPGSMPPNAALKFAAFPALLLLFITILTNFFFFI
        RPGR+YFIC VGNHCNLGMKFAIDV+PI GSMPPNAALK  AFP +LLLFIT++TNF F I
Subjt:  RPGRKYFICNVGNHCNLGMKFAIDVLPIPGSMPPNAALKFAAFPALLLLFITILTNFFFFI

XP_008443975.1 PREDICTED: umecyanin-like [Cucumis melo]1.1e-4763.98Show/hide
Query:  MVSTQKMSFFASLLFIVVLLQVVAAVDHRVGGNFG--------------------------FNSSANESHNYAIPESEAEFDRCVKPGIYFEKGIFPVLD
        MVSTQK++F AS LFI VLL  VAA+D++VGG+FG                          FNSSANE+HNYA+P S+AE D CVKPGI F  G++PVLD
Subjt:  MVSTQKMSFFASLLFIVVLLQVVAAVDHRVGGNFG--------------------------FNSSANESHNYAIPESEAEFDRCVKPGIYFEKGIFPVLD

Query:  RPGRKYFICNVGNHCNLGMKFAIDVLPIPGSMPPNAALKFAAFPALLLLFITILTNFFFFI
        RPGRKYFIC VGNHCNLGMKFA+DV+PIPGSMPPNAALK  AFP LLL+FITI+ NF FFI
Subjt:  RPGRKYFICNVGNHCNLGMKFAIDVLPIPGSMPPNAALKFAAFPALLLLFITILTNFFFFI

XP_023516867.1 umecyanin-like [Cucurbita pepo subsp. pepo]1.1e-3956.96Show/hide
Query:  VSTQKMSFFASLLFIVVLLQVVAAVDHRVGGNFG--------------------------FNSSANESHNYAIPESEAEFDRCVKPGIYFEKGIFPVLDR
        +++ + SF ASLLFI  LLQ  AA+DHRVGG+FG                          FNSSAN++HNYA+PES+ EFD CVKPG++FE  IF   DR
Subjt:  VSTQKMSFFASLLFIVVLLQVVAAVDHRVGGNFG--------------------------FNSSANESHNYAIPESEAEFDRCVKPGIYFEKGIFPVLDR

Query:  PGRKYFICNVGNHCNLGMKFAIDVLPIPGSMPPNAALKFAAFPALLLLFITILTNFFF
        PGRKYFICNVGNHCNLGMKFA+DVLP PG MPPN+ALK  AFP L  +    L NF F
Subjt:  PGRKYFICNVGNHCNLGMKFAIDVLPIPGSMPPNAALKFAAFPALLLLFITILTNFFF

XP_038878652.1 cucumber peeling cupredoxin-like [Benincasa hispida]6.9e-4766.46Show/hide
Query:  MVSTQKMSFFASLLFIVVLLQVVAAVDHRVGGNFG--------------------------FNSSANESHNYAIPESEAEFDRCVKPGIYFEKGIFPVLD
        MVSTQKMSFFAS LFI VLL VVAAV HRVGG+FG                          FNSSANE+HNYA+PES+AEFD CVKPG++FE       +
Subjt:  MVSTQKMSFFASLLFIVVLLQVVAAVDHRVGGNFG--------------------------FNSSANESHNYAIPESEAEFDRCVKPGIYFEKGIFPVLD

Query:  RPGRKYFICNVGNHCNLGMKFAIDVLPIPGSMPPNAALKFAAFPALLLLFITILTNFFFFI
        RPGRKYFICNVGNHCNLGMKFAID+LP PGS+ PNAALK  AFP LLLLFITI+TNFFFF+
Subjt:  RPGRKYFICNVGNHCNLGMKFAIDVLPIPGSMPPNAALKFAAFPALLLLFITILTNFFFFI

TrEMBL top hitse value%identityAlignment
A0A0A0LZE7 Phytocyanin domain-containing protein1.2e-4463.35Show/hide
Query:  MVSTQKMSFFASLLFIVVLLQVVAAVDHRVGGNFG--------------------------FNSSANESHNYAIPESEAEFDRCVKPGIYFEKGIFPVLD
        MVSTQK++F AS LFI VLL  VAAVD++VGG+FG                          FNSSANE+HNYA+P S+AE D CVKPGI F   +FPVLD
Subjt:  MVSTQKMSFFASLLFIVVLLQVVAAVDHRVGGNFG--------------------------FNSSANESHNYAIPESEAEFDRCVKPGIYFEKGIFPVLD

Query:  RPGRKYFICNVGNHCNLGMKFAIDVLPIPGSMPPNAALKFAAFPALLLLFITILTNFFFFI
        RPGR+YFIC VGNHCNLGMKFAIDV+PI GSMPPNAALK  AFP +LLLFIT++TNF F I
Subjt:  RPGRKYFICNVGNHCNLGMKFAIDVLPIPGSMPPNAALKFAAFPALLLLFITILTNFFFFI

A0A1S3B9D0 umecyanin-like5.2e-4863.98Show/hide
Query:  MVSTQKMSFFASLLFIVVLLQVVAAVDHRVGGNFG--------------------------FNSSANESHNYAIPESEAEFDRCVKPGIYFEKGIFPVLD
        MVSTQK++F AS LFI VLL  VAA+D++VGG+FG                          FNSSANE+HNYA+P S+AE D CVKPGI F  G++PVLD
Subjt:  MVSTQKMSFFASLLFIVVLLQVVAAVDHRVGGNFG--------------------------FNSSANESHNYAIPESEAEFDRCVKPGIYFEKGIFPVLD

Query:  RPGRKYFICNVGNHCNLGMKFAIDVLPIPGSMPPNAALKFAAFPALLLLFITILTNFFFFI
        RPGRKYFIC VGNHCNLGMKFA+DV+PIPGSMPPNAALK  AFP LLL+FITI+ NF FFI
Subjt:  RPGRKYFICNVGNHCNLGMKFAIDVLPIPGSMPPNAALKFAAFPALLLLFITILTNFFFFI

A0A5D3C3B4 Umecyanin-like5.2e-4863.98Show/hide
Query:  MVSTQKMSFFASLLFIVVLLQVVAAVDHRVGGNFG--------------------------FNSSANESHNYAIPESEAEFDRCVKPGIYFEKGIFPVLD
        MVSTQK++F AS LFI VLL  VAA+D++VGG+FG                          FNSSANE+HNYA+P S+AE D CVKPGI F  G++PVLD
Subjt:  MVSTQKMSFFASLLFIVVLLQVVAAVDHRVGGNFG--------------------------FNSSANESHNYAIPESEAEFDRCVKPGIYFEKGIFPVLD

Query:  RPGRKYFICNVGNHCNLGMKFAIDVLPIPGSMPPNAALKFAAFPALLLLFITILTNFFFFI
        RPGRKYFIC VGNHCNLGMKFA+DV+PIPGSMPPNAALK  AFP LLL+FITI+ NF FFI
Subjt:  RPGRKYFICNVGNHCNLGMKFAIDVLPIPGSMPPNAALKFAAFPALLLLFITILTNFFFFI

A0A6J1H9M4 umecyanin-like8.8e-4058.75Show/hide
Query:  VSTQKMSFFASLLFIVVLLQVVAAVDHRVGGNFG--------------------------FNSSANESHNYAIPESEAEFDRCVKPGIYFEKGIFPVLDR
        + + + SF ASLLFI  LL   AAVDHRVGG+FG                          FNSSAN++HNYA+PES+AEFD CVKPGI+FE  IF   DR
Subjt:  VSTQKMSFFASLLFIVVLLQVVAAVDHRVGGNFG--------------------------FNSSANESHNYAIPESEAEFDRCVKPGIYFEKGIFPVLDR

Query:  PGRKYFICNVGNHCNLGMKFAIDVLPIPGSMPPNAALKFAAFPALLLLFITILTNFFFFI
        PGRKYFICNVGNHCNLGMKFA+DVLP PG MPPN+ALK  A P L ++  TIL N  FFI
Subjt:  PGRKYFICNVGNHCNLGMKFAIDVLPIPGSMPPNAALKFAAFPALLLLFITILTNFFFFI

A0A6J1JI19 cucumber peeling cupredoxin-like1.7e-3857.06Show/hide
Query:  VSTQKMSFFASLLFIVVLLQ---VVAAVDHRVGGNFG--------------------------FNSSANESHNYAIPESEAEFDRCVKPGIYFEKGIFPV
        + + + SF ASLLFI  LLQ     AAVDHRVGG+FG                          FNSSAN++HNY +PES+AEFD CVKPGI+FE  IF  
Subjt:  VSTQKMSFFASLLFIVVLLQ---VVAAVDHRVGGNFG--------------------------FNSSANESHNYAIPESEAEFDRCVKPGIYFEKGIFPV

Query:  LDRPGRKYFICNVGNHCNLGMKFAIDVLPIPGSMPPNAALKFAAFPALLLLFITILTNFFFFI
         DRP RKYFICNVGNHC LGMKFA+DVLP PG MPPN+ALK  AFP L  +   IL NF FFI
Subjt:  LDRPGRKYFICNVGNHCNLGMKFAIDVLPIPGSMPPNAALKFAAFPALLLLFITILTNFFFFI

SwissProt top hitse value%identityAlignment
O82081 Uclacyanin 11.2e-0629.63Show/hide
Query:  VSTQKMSFFASLLFIVVLLQVVAAVDHRVGGNFGFNSSAN-----ESHNYAIPE----------------SEAEFDRC--VKPGIYFEKGIFPV-LDRPG
        +++++M    S+L    L+ +  A DH +GG  G+   A+         +A+ +                ++ EFD C  VKP I F  G   V L  PG
Subjt:  VSTQKMSFFASLLFIVVLLQVVAAVDHRVGGNFGFNSSAN-----ESHNYAIPE----------------SEAEFDRC--VKPGIYFEKGIFPV-LDRPG

Query:  RKYFICNVGNHCNLGMKFAIDVLPIPGSMPPNAAL
        ++YFIC +  HC+ GMK  ++V+P   ++ P A L
Subjt:  RKYFICNVGNHCNLGMKFAIDVLPIPGSMPPNAAL

P42849 Umecyanin8.9e-0535Show/hide
Query:  RVGGNFGFNSSANESHNYAIPESEAEFDRCVKPGIYFEKGIFPV---LDRPGRKYFICNVGNHCNLGMKFAIDVLPIPGS
        RVG    F+ +A   H+ A+   +A FD C K          PV   L+  G +Y+IC VG+HC +G K +I+V+   G+
Subjt:  RVGGNFGFNSSANESHNYAIPESEAEFDRCVKPGIYFEKGIFPV---LDRPGRKYFICNVGNHCNLGMKFAIDVLPIPGS

Q07488 Blue copper protein1.8e-0535.05Show/hide
Query:  RVGGNFGFNSSANESHNYAIPESEAEFDRCVKPGIYFEKGIFPV---LDRPGRKYFICNVGNHCNLGMKFAIDVL---------------PIPGSMP
        RVG    F+ +A   H+ A+  SEA F+ C K        + PV   L+  G +YFIC VG+HC  G K +I V+               P PGS P
Subjt:  RVGGNFGFNSSANESHNYAIPESEAEFDRCVKPGIYFEKGIFPV---LDRPGRKYFICNVGNHCNLGMKFAIDVL---------------PIPGSMP

Arabidopsis top hitse value%identityAlignment
AT1G48940.1 early nodulin-like protein 61.1e-0538.36Show/hide
Query:  SEAEFDRC--VKPGIY--FEKGIFPVLDRPGRKYFICNVGNHCNLGMKFAIDVLPI---PGSMPPNAALKFAA
        +E E+ +C   KP +Y   +  +F  LDRPG  YFI  V  HC  G K  I V+ +   P S PP+++L  +A
Subjt:  SEAEFDRC--VKPGIY--FEKGIFPVLDRPGRKYFICNVGNHCNLGMKFAIDVLPI---PGSMPPNAALKFAA

AT2G31050.1 Cupredoxin superfamily protein4.1e-0527.01Show/hide
Query:  MVSTQKMSFFASLLFIVVLLQV-VAAVDHRVGGNFGFNSSANESHNYA------------------------IPESEAEFDRCVKPGIYFEKGI-FPVLD
        M   +  +FF SLL +V L  + V    H+VG + G+   +     +A                        +  ++ E     KP   +E G    +L 
Subjt:  MVSTQKMSFFASLLFIVVLLQV-VAAVDHRVGGNFGFNSSANESHNYA------------------------IPESEAEFDRCVKPGIYFEKGI-FPVLD

Query:  RPGRKYFICNVGNHCNLGMKFAIDVLPIPGSMPPNAA
        +PG ++FIC    HC++G K  I VL  P S+ P AA
Subjt:  RPGRKYFICNVGNHCNLGMKFAIDVLPIPGSMPPNAA

AT2G32300.1 uclacyanin 18.8e-0829.63Show/hide
Query:  VSTQKMSFFASLLFIVVLLQVVAAVDHRVGGNFGFNSSAN-----ESHNYAIPE----------------SEAEFDRC--VKPGIYFEKGIFPV-LDRPG
        +++++M    S+L    L+ +  A DH +GG  G+   A+         +A+ +                ++ EFD C  VKP I F  G   V L  PG
Subjt:  VSTQKMSFFASLLFIVVLLQVVAAVDHRVGGNFGFNSSAN-----ESHNYAIPE----------------SEAEFDRC--VKPGIYFEKGIFPV-LDRPG

Query:  RKYFICNVGNHCNLGMKFAIDVLPIPGSMPPNAAL
        ++YFIC +  HC+ GMK  ++V+P   ++ P A L
Subjt:  RKYFICNVGNHCNLGMKFAIDVLPIPGSMPPNAAL

AT3G60270.1 Cupredoxin superfamily protein2.0e-0430Show/hide
Query:  LLFIVVLLQVVAAVDHRVGGNFG------FNSSANE---------------SHNYAIPESEAEFDRC--VKPGIYFEKGIFPV-LDRPGRKYFICNVGNH
        LL ++V +  V AV  +VG N G      + S  +E               SH+ A+  ++A++D C   +P   F  G   + L + G  +F+C    H
Subjt:  LLFIVVLLQVVAAVDHRVGGNFG------FNSSANE---------------SHNYAIPESEAEFDRC--VKPGIYFEKGIFPV-LDRPGRKYFICNVGNH

Query:  CNLGMKFAIDVLPIPGSMPP
        C+LGMK A+ VL      PP
Subjt:  CNLGMKFAIDVLPIPGSMPP

AT5G20230.1 blue-copper-binding protein1.3e-0635.05Show/hide
Query:  RVGGNFGFNSSANESHNYAIPESEAEFDRCVKPGIYFEKGIFPV---LDRPGRKYFICNVGNHCNLGMKFAIDVL---------------PIPGSMP
        RVG    F+ +A   H+ A+  SEA F+ C K        + PV   L+  G +YFIC VG+HC  G K +I V+               P PGS P
Subjt:  RVGGNFGFNSSANESHNYAIPESEAEFDRCVKPGIYFEKGIFPV---LDRPGRKYFICNVGNHCNLGMKFAIDVL---------------PIPGSMP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTCAACACAAAAGATGAGTTTCTTTGCTTCTCTTCTCTTCATTGTGGTTCTCCTCCAAGTTGTTGCTGCCGTCGACCACCGCGTCGGAGGCAATTTTGGGTTCAA
TTCAAGTGCGAATGAAAGTCACAATTATGCAATTCCGGAGTCTGAAGCAGAGTTCGATAGATGCGTGAAGCCAGGAATATACTTTGAGAAGGGCATTTTCCCTGTGTTGG
ATCGTCCTGGTCGTAAATACTTTATATGTAATGTTGGGAACCATTGCAATTTAGGCATGAAATTTGCTATTGACGTTTTGCCTATTCCTGGATCAATGCCGCCTAATGCT
GCTCTCAAATTTGCTGCATTTCCTGCACTGCTGCTTCTCTTCATCACCATCCTTACCAATTTCTTCTTCTTCATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTCAACACAAAAGATGAGTTTCTTTGCTTCTCTTCTCTTCATTGTGGTTCTCCTCCAAGTTGTTGCTGCCGTCGACCACCGCGTCGGAGGCAATTTTGGGTTCAA
TTCAAGTGCGAATGAAAGTCACAATTATGCAATTCCGGAGTCTGAAGCAGAGTTCGATAGATGCGTGAAGCCAGGAATATACTTTGAGAAGGGCATTTTCCCTGTGTTGG
ATCGTCCTGGTCGTAAATACTTTATATGTAATGTTGGGAACCATTGCAATTTAGGCATGAAATTTGCTATTGACGTTTTGCCTATTCCTGGATCAATGCCGCCTAATGCT
GCTCTCAAATTTGCTGCATTTCCTGCACTGCTGCTTCTCTTCATCACCATCCTTACCAATTTCTTCTTCTTCATTTGAGACCATATTCATACATTCAAAATTATTGCAAT
ACTATATGATATTTTTATAATTTTAATCAATATTGTTGTAACGTTATTGTACATGCCAGTGTTTTTTCACGTTTAATTTGTTGTAGTCATTCATTCACTTGTGTTTGTAA
GTGATTGAAATCATTTGATCTTAGTGGAGAATATTAACATTTATAAACTTATTATATTCTATCAATTTTAACTTTTAAGTTTTCAAA
Protein sequenceShow/hide protein sequence
MVSTQKMSFFASLLFIVVLLQVVAAVDHRVGGNFGFNSSANESHNYAIPESEAEFDRCVKPGIYFEKGIFPVLDRPGRKYFICNVGNHCNLGMKFAIDVLPIPGSMPPNA
ALKFAAFPALLLLFITILTNFFFFI