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Lsi06G010260 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G010260
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr06:20432332..20432661
RNA-Seq ExpressionLsi06G010260
SyntenyLsi06G010260
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050078.1 hypothetical protein E6C27_scaffold675G00620 [Cucumis melo var. makuwa]2.3e-3274.76Show/hide
Query:  STIKLSLVFLVCIVILASPTMAHTMVAQP-DSTTLEGFSLFGCTSFISEAPKCVIDNLKNAVAPHPSCCKAISKLNDCSSEFFKGIPSADMILIKGICAL
        ++IKL LVF VC+ ILA   +AHT  A P D  T E  SL GCTSFISEA KCVID +KNAVAPHPSCCKA SKLNDCS EF KGIPSADMILIKGICAL
Subjt:  STIKLSLVFLVCIVILASPTMAHTMVAQP-DSTTLEGFSLFGCTSFISEAPKCVIDNLKNAVAPHPSCCKAISKLNDCSSEFFKGIPSADMILIKGICAL

Query:  WGV
        WGV
Subjt:  WGV

KAE8653021.1 hypothetical protein Csa_004567 [Cucumis sativus]6.0e-3374.76Show/hide
Query:  STIKLSLVFLVCIVILASPTMAHT-MVAQPDSTTLEGFSLFGCTSFISEAPKCVIDNLKNAVAPHPSCCKAISKLNDCSSEFFKGIPSADMILIKGICAL
        +++KL LVFLVCI ILA   MAHT  +A  D  T E FSL GCTSFISEA  C++D +KNAVAPHPSCCKA SKLNDCSSEF KGIPSADMILIKGICAL
Subjt:  STIKLSLVFLVCIVILASPTMAHT-MVAQPDSTTLEGFSLFGCTSFISEAPKCVIDNLKNAVAPHPSCCKAISKLNDCSSEFFKGIPSADMILIKGICAL

Query:  WGV
        WGV
Subjt:  WGV

KAG6589812.1 hypothetical protein SDJN03_15235, partial [Cucurbita argyrosperma subsp. sororia]6.4e-2766Show/hide
Query:  IKLSLVFLVCIVILASPTMAHTMVAQPDSTTLEGFSLFGCTSFISEAPKCVIDNLKNAVAPHPSCCKAISKLNDCSSEFFKGIPSADMILIKGICALWGV
        +KL+   LVCI ILASP MA      PD    EGFSLFGCTS +SE  KCV+D +K AVAPHPSCC+AISKLN CSS F K +PSADM LIK +CALWGV
Subjt:  IKLSLVFLVCIVILASPTMAHTMVAQPDSTTLEGFSLFGCTSFISEAPKCVIDNLKNAVAPHPSCCKAISKLNDCSSEFFKGIPSADMILIKGICALWGV

TYK10330.1 hypothetical protein E5676_scaffold367G00010 [Cucumis melo var. makuwa]2.3e-3274.76Show/hide
Query:  STIKLSLVFLVCIVILASPTMAHTMVAQP-DSTTLEGFSLFGCTSFISEAPKCVIDNLKNAVAPHPSCCKAISKLNDCSSEFFKGIPSADMILIKGICAL
        ++IKL LVF VC+ ILA   +AHT  A P D  T E  SL GCTSFISEA KCVID +KNAVAPHPSCCKA SKLNDCS EF KGIPSADMILIKGICAL
Subjt:  STIKLSLVFLVCIVILASPTMAHTMVAQP-DSTTLEGFSLFGCTSFISEAPKCVIDNLKNAVAPHPSCCKAISKLNDCSSEFFKGIPSADMILIKGICAL

Query:  WGV
        WGV
Subjt:  WGV

TYK10345.1 hypothetical protein E5676_scaffold367G00210 [Cucumis melo var. makuwa]2.4e-2664.65Show/hide
Query:  KLSLVFLVCIVILASPTMAHTMVAQPDSTTLEGFSLFGCTSFISEAPKCVIDNLKNAVAPHPSCCKAISKLNDCSSEFFKGIPSADMILIKGICALWGV
        KL LV LVCI ILAS   A   +    + T E FSLF C SF+ +A KCVID LKNAVAPHPSCC+AIS+L+DCSS+F K IPS+DMIL+K ICA WGV
Subjt:  KLSLVFLVCIVILASPTMAHTMVAQPDSTTLEGFSLFGCTSFISEAPKCVIDNLKNAVAPHPSCCKAISKLNDCSSEFFKGIPSADMILIKGICALWGV

TrEMBL top hitse value%identityAlignment
A0A5A7U483 Uncharacterized protein1.1e-3274.76Show/hide
Query:  STIKLSLVFLVCIVILASPTMAHTMVAQP-DSTTLEGFSLFGCTSFISEAPKCVIDNLKNAVAPHPSCCKAISKLNDCSSEFFKGIPSADMILIKGICAL
        ++IKL LVF VC+ ILA   +AHT  A P D  T E  SL GCTSFISEA KCVID +KNAVAPHPSCCKA SKLNDCS EF KGIPSADMILIKGICAL
Subjt:  STIKLSLVFLVCIVILASPTMAHTMVAQP-DSTTLEGFSLFGCTSFISEAPKCVIDNLKNAVAPHPSCCKAISKLNDCSSEFFKGIPSADMILIKGICAL

Query:  WGV
        WGV
Subjt:  WGV

A0A5A7U9B0 Uncharacterized protein1.1e-2461.62Show/hide
Query:  KLSLVFLVCIVILASPTMAHTMVAQPDSTTLEGFSLFGCTSFISEAPKCVIDNLKNAVAPHPSCCKAISKLNDCSSEFFKGIPSADMILIKGICALWGV
        KL LV  VCI ILAS   A   +    + T E FSLF C SF+ +A KCVID LKN VAPHPSCC+AI++L+DCSS+F K IPS DMIL+K ICA WGV
Subjt:  KLSLVFLVCIVILASPTMAHTMVAQPDSTTLEGFSLFGCTSFISEAPKCVIDNLKNAVAPHPSCCKAISKLNDCSSEFFKGIPSADMILIKGICALWGV

A0A5D3CEQ4 Uncharacterized protein5.5e-2461.17Show/hide
Query:  ASTIKLSLVFLVCIVILASPTMAHTMVAQPDSTTLEGFSLFGCTSFISEAPKCVIDNLKNAVAPHPSCCKAISKLNDCSSEFFKGIPSADMILIKGICAL
        AS  KL L  L CI ILAS  MA   V    +  +   SLF C SF+ +A +CVID LKNAVAPHPSCC+AIS+L+DCSS+F K IPS DMIL+K ICAL
Subjt:  ASTIKLSLVFLVCIVILASPTMAHTMVAQPDSTTLEGFSLFGCTSFISEAPKCVIDNLKNAVAPHPSCCKAISKLNDCSSEFFKGIPSADMILIKGICAL

Query:  WGV
        WGV
Subjt:  WGV

A0A5D3CFS6 Uncharacterized protein1.2e-2664.65Show/hide
Query:  KLSLVFLVCIVILASPTMAHTMVAQPDSTTLEGFSLFGCTSFISEAPKCVIDNLKNAVAPHPSCCKAISKLNDCSSEFFKGIPSADMILIKGICALWGV
        KL LV LVCI ILAS   A   +    + T E FSLF C SF+ +A KCVID LKNAVAPHPSCC+AIS+L+DCSS+F K IPS+DMIL+K ICA WGV
Subjt:  KLSLVFLVCIVILASPTMAHTMVAQPDSTTLEGFSLFGCTSFISEAPKCVIDNLKNAVAPHPSCCKAISKLNDCSSEFFKGIPSADMILIKGICALWGV

A0A5D3CG41 Uncharacterized protein1.1e-3274.76Show/hide
Query:  STIKLSLVFLVCIVILASPTMAHTMVAQP-DSTTLEGFSLFGCTSFISEAPKCVIDNLKNAVAPHPSCCKAISKLNDCSSEFFKGIPSADMILIKGICAL
        ++IKL LVF VC+ ILA   +AHT  A P D  T E  SL GCTSFISEA KCVID +KNAVAPHPSCCKA SKLNDCS EF KGIPSADMILIKGICAL
Subjt:  STIKLSLVFLVCIVILASPTMAHTMVAQP-DSTTLEGFSLFGCTSFISEAPKCVIDNLKNAVAPHPSCCKAISKLNDCSSEFFKGIPSADMILIKGICAL

Query:  WGV
        WGV
Subjt:  WGV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTACTCATTGAATGCATCTACGATAAAGCTATCACTTGTATTTTTAGTCTGCATAGTCATTTTAGCATCACCGACAATGGCACACACTATGGTGGCACAGCCTGA
TTCAACCACATTAGAAGGTTTCTCATTGTTCGGCTGCACATCGTTTATTTCCGAGGCACCAAAATGTGTGATTGATAATTTGAAGAACGCAGTTGCTCCTCATCCGTCAT
GTTGCAAAGCCATTTCTAAGCTCAACGATTGTTCCTCTGAGTTTTTCAAAGGCATTCCCTCTGCTGACATGATTTTGATTAAGGGCATTTGTGCTTTGTGGGGTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTACTCATTGAATGCATCTACGATAAAGCTATCACTTGTATTTTTAGTCTGCATAGTCATTTTAGCATCACCGACAATGGCACACACTATGGTGGCACAGCCTGA
TTCAACCACATTAGAAGGTTTCTCATTGTTCGGCTGCACATCGTTTATTTCCGAGGCACCAAAATGTGTGATTGATAATTTGAAGAACGCAGTTGCTCCTCATCCGTCAT
GTTGCAAAGCCATTTCTAAGCTCAACGATTGTTCCTCTGAGTTTTTCAAAGGCATTCCCTCTGCTGACATGATTTTGATTAAGGGCATTTGTGCTTTGTGGGGTGTTTGA
Protein sequenceShow/hide protein sequence
MEYSLNASTIKLSLVFLVCIVILASPTMAHTMVAQPDSTTLEGFSLFGCTSFISEAPKCVIDNLKNAVAPHPSCCKAISKLNDCSSEFFKGIPSADMILIKGICALWGV