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Lsi06G010270 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G010270
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr06:20441209..20441544
RNA-Seq ExpressionLsi06G010270
SyntenyLsi06G010270
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050063.1 hypothetical protein E6C27_scaffold675G00440 [Cucumis melo var. makuwa]3.8e-3578.57Show/hide
Query:  MATSA-TKLPLVLLLYIAILASSVTTRLTTVAATTPAPLTTKDFSLFPCISFVPEAIKCVIDVLKNAVAPHPSCCEAISKLHDCSSEFLRDIPFGDMILI
        MATSA TKLPL+LL+ IAILASSVT R T VAA TP    +KDFSLFPCISFVP A K VIDVLKNAVAPHPSCCEAIS+LHDCSS+FL+DIP  DMIL+
Subjt:  MATSA-TKLPLVLLLYIAILASSVTTRLTTVAATTPAPLTTKDFSLFPCISFVPEAIKCVIDVLKNAVAPHPSCCEAISKLHDCSSEFLRDIPFGDMILI

Query:  KSVCALWGVSIS
        KS+CA WGVSIS
Subjt:  KSVCALWGVSIS

KAA0050065.1 hypothetical protein E6C27_scaffold675G00460 [Cucumis melo var. makuwa]6.8e-3272.07Show/hide
Query:  MATSATKLPLVLLLYIAILASSVTTRLTTVAATTPAPLTTKDFSLFPCISFVPEAIKCVIDVLKNAVAPHPSCCEAISKLHDCSSEFLRDIPFGDMILIK
        MA S TKLPL LL  I ILASSV  R  TVAA  P      D SLFPC SFVP+A +CVIDVLKNAVAPHPSCC+AIS+LHDCSS+FL+DIP  DMIL+K
Subjt:  MATSATKLPLVLLLYIAILASSVTTRLTTVAATTPAPLTTKDFSLFPCISFVPEAIKCVIDVLKNAVAPHPSCCEAISKLHDCSSEFLRDIPFGDMILIK

Query:  SVCALWGVSIS
        S+CALWGVSIS
Subjt:  SVCALWGVSIS

KAA0050079.1 hypothetical protein E6C27_scaffold675G00630 [Cucumis melo var. makuwa]1.3e-3577.68Show/hide
Query:  MATSA-TKLPLVLLLYIAILASSVTTRLTTVAATTPAPLTTKDFSLFPCISFVPEAIKCVIDVLKNAVAPHPSCCEAISKLHDCSSEFLRDIPFGDMILI
        MATSA TKLPLVL + IAILASSVT   T VAA TP   T++DFSLFPCISFVP+A KCVIDVLKN VAPHPSCCEAI++LHDCSS+FL+DIP GDMIL+
Subjt:  MATSA-TKLPLVLLLYIAILASSVTTRLTTVAATTPAPLTTKDFSLFPCISFVPEAIKCVIDVLKNAVAPHPSCCEAISKLHDCSSEFLRDIPFGDMILI

Query:  KSVCALWGVSIS
        KS+CA WGVSIS
Subjt:  KSVCALWGVSIS

KAE8653017.1 hypothetical protein Csa_004564 [Cucumis sativus]6.8e-3275.22Show/hide
Query:  MATSATKLPLVL-LLYIAILASSVTTRLTTVAATTPA-PLTTKD-FSLFPCISFVPEAIKCVIDVLKNAVAPHPSCCEAISKLHDCSSEFLRDIPFGDMI
        MATSATKLPLVL LL IAILASSV  R   V A  P+ PL T++ FSLFPCIS VP+A KCVIDVL N VAPHPSCCEAISKL+DCSS FL+DIP G MI
Subjt:  MATSATKLPLVL-LLYIAILASSVTTRLTTVAATTPA-PLTTKD-FSLFPCISFVPEAIKCVIDVLKNAVAPHPSCCEAISKLHDCSSEFLRDIPFGDMI

Query:  LIKSVCALWGVSI
        L+KSVCA WGVSI
Subjt:  LIKSVCALWGVSI

TYK10345.1 hypothetical protein E5676_scaffold367G00210 [Cucumis melo var. makuwa]2.4e-3780.36Show/hide
Query:  MATSA-TKLPLVLLLYIAILASSVTTRLTTVAATTPAPLTTKDFSLFPCISFVPEAIKCVIDVLKNAVAPHPSCCEAISKLHDCSSEFLRDIPFGDMILI
        MATSA TKLPLVLL+ IAILASSVT R T VAA TP   T++DFSLFPCISFVP+A KCVIDVLKNAVAPHPSCCEAIS+LHDCSS+FL+DIP  DMIL+
Subjt:  MATSA-TKLPLVLLLYIAILASSVTTRLTTVAATTPAPLTTKDFSLFPCISFVPEAIKCVIDVLKNAVAPHPSCCEAISKLHDCSSEFLRDIPFGDMILI

Query:  KSVCALWGVSIS
        KS+CA WGVSIS
Subjt:  KSVCALWGVSIS

TrEMBL top hitse value%identityAlignment
A0A5A7U2D8 Uncharacterized protein1.9e-3578.57Show/hide
Query:  MATSA-TKLPLVLLLYIAILASSVTTRLTTVAATTPAPLTTKDFSLFPCISFVPEAIKCVIDVLKNAVAPHPSCCEAISKLHDCSSEFLRDIPFGDMILI
        MATSA TKLPL+LL+ IAILASSVT R T VAA TP    +KDFSLFPCISFVP A K VIDVLKNAVAPHPSCCEAIS+LHDCSS+FL+DIP  DMIL+
Subjt:  MATSA-TKLPLVLLLYIAILASSVTTRLTTVAATTPAPLTTKDFSLFPCISFVPEAIKCVIDVLKNAVAPHPSCCEAISKLHDCSSEFLRDIPFGDMILI

Query:  KSVCALWGVSIS
        KS+CA WGVSIS
Subjt:  KSVCALWGVSIS

A0A5A7U8Y3 Uncharacterized protein3.3e-3272.07Show/hide
Query:  MATSATKLPLVLLLYIAILASSVTTRLTTVAATTPAPLTTKDFSLFPCISFVPEAIKCVIDVLKNAVAPHPSCCEAISKLHDCSSEFLRDIPFGDMILIK
        MA S TKLPL LL  I ILASSV  R  TVAA  P      D SLFPC SFVP+A +CVIDVLKNAVAPHPSCC+AIS+LHDCSS+FL+DIP  DMIL+K
Subjt:  MATSATKLPLVLLLYIAILASSVTTRLTTVAATTPAPLTTKDFSLFPCISFVPEAIKCVIDVLKNAVAPHPSCCEAISKLHDCSSEFLRDIPFGDMILIK

Query:  SVCALWGVSIS
        S+CALWGVSIS
Subjt:  SVCALWGVSIS

A0A5A7U9B0 Uncharacterized protein6.4e-3677.68Show/hide
Query:  MATSA-TKLPLVLLLYIAILASSVTTRLTTVAATTPAPLTTKDFSLFPCISFVPEAIKCVIDVLKNAVAPHPSCCEAISKLHDCSSEFLRDIPFGDMILI
        MATSA TKLPLVL + IAILASSVT   T VAA TP   T++DFSLFPCISFVP+A KCVIDVLKN VAPHPSCCEAI++LHDCSS+FL+DIP GDMIL+
Subjt:  MATSA-TKLPLVLLLYIAILASSVTTRLTTVAATTPAPLTTKDFSLFPCISFVPEAIKCVIDVLKNAVAPHPSCCEAISKLHDCSSEFLRDIPFGDMILI

Query:  KSVCALWGVSIS
        KS+CA WGVSIS
Subjt:  KSVCALWGVSIS

A0A5D3CEQ4 Uncharacterized protein3.3e-3272.07Show/hide
Query:  MATSATKLPLVLLLYIAILASSVTTRLTTVAATTPAPLTTKDFSLFPCISFVPEAIKCVIDVLKNAVAPHPSCCEAISKLHDCSSEFLRDIPFGDMILIK
        MA S TKLPL LL  I ILASSV  R  TVAA  P      D SLFPC SFVP+A +CVIDVLKNAVAPHPSCC+AIS+LHDCSS+FL+DIP  DMIL+K
Subjt:  MATSATKLPLVLLLYIAILASSVTTRLTTVAATTPAPLTTKDFSLFPCISFVPEAIKCVIDVLKNAVAPHPSCCEAISKLHDCSSEFLRDIPFGDMILIK

Query:  SVCALWGVSIS
        S+CALWGVSIS
Subjt:  SVCALWGVSIS

A0A5D3CFS6 Uncharacterized protein1.2e-3780.36Show/hide
Query:  MATSA-TKLPLVLLLYIAILASSVTTRLTTVAATTPAPLTTKDFSLFPCISFVPEAIKCVIDVLKNAVAPHPSCCEAISKLHDCSSEFLRDIPFGDMILI
        MATSA TKLPLVLL+ IAILASSVT R T VAA TP   T++DFSLFPCISFVP+A KCVIDVLKNAVAPHPSCCEAIS+LHDCSS+FL+DIP  DMIL+
Subjt:  MATSA-TKLPLVLLLYIAILASSVTTRLTTVAATTPAPLTTKDFSLFPCISFVPEAIKCVIDVLKNAVAPHPSCCEAISKLHDCSSEFLRDIPFGDMILI

Query:  KSVCALWGVSIS
        KS+CA WGVSIS
Subjt:  KSVCALWGVSIS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACATCAGCAACCAAGTTACCACTTGTACTCTTACTCTACATTGCCATTTTAGCATCATCCGTAACAACTCGTCTGACGACGGTGGCAGCAACAACGCCTGCTCC
TTTGACAACGAAAGATTTCTCTTTATTTCCTTGCATATCATTTGTTCCTGAGGCGATAAAATGTGTGATTGATGTGCTTAAGAATGCAGTAGCTCCTCATCCTTCTTGTT
GCGAAGCTATTTCTAAACTTCATGATTGTTCCTCCGAGTTTCTCAGAGACATTCCCTTTGGAGATATGATTTTGATTAAGAGTGTTTGTGCTTTGTGGGGAGTTTCTATT
TCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAACATCAGCAACCAAGTTACCACTTGTACTCTTACTCTACATTGCCATTTTAGCATCATCCGTAACAACTCGTCTGACGACGGTGGCAGCAACAACGCCTGCTCC
TTTGACAACGAAAGATTTCTCTTTATTTCCTTGCATATCATTTGTTCCTGAGGCGATAAAATGTGTGATTGATGTGCTTAAGAATGCAGTAGCTCCTCATCCTTCTTGTT
GCGAAGCTATTTCTAAACTTCATGATTGTTCCTCCGAGTTTCTCAGAGACATTCCCTTTGGAGATATGATTTTGATTAAGAGTGTTTGTGCTTTGTGGGGAGTTTCTATT
TCTTAA
Protein sequenceShow/hide protein sequence
MATSATKLPLVLLLYIAILASSVTTRLTTVAATTPAPLTTKDFSLFPCISFVPEAIKCVIDVLKNAVAPHPSCCEAISKLHDCSSEFLRDIPFGDMILIKSVCALWGVSI
S