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Lsi06G010290 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G010290
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr06:20451477..20451785
RNA-Seq ExpressionLsi06G010290
SyntenyLsi06G010290
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050078.1 hypothetical protein E6C27_scaffold675G00620 [Cucumis melo var. makuwa]4.0e-3173.08Show/hide
Query:  MASMKLALVFLVSIVVLALPAIACT--APVPDSFTTEDFSLLGCTSFISEATKCVIDVMKNVIAPHPSCCKAISKLNECSSEFLKNVPSADMDLIKGICA
        MAS+KL LVF V + +LA+  IA T  A   D FT E  SLLGCTSFISEATKCVIDVMKN +APHPSCCKA SKLN+CS EFLK +PSADM LIKGICA
Subjt:  MASMKLALVFLVSIVVLALPAIACT--APVPDSFTTEDFSLLGCTSFISEATKCVIDVMKNVIAPHPSCCKAISKLNECSSEFLKNVPSADMDLIKGICA

Query:  LWGV
        LWGV
Subjt:  LWGV

KAA0050080.1 hypothetical protein E6C27_scaffold675G00640 [Cucumis melo var. makuwa]9.6e-2559.41Show/hide
Query:  ASMKLALVFLVSIVVLALPAIACTAPVPDSFTTEDFSLLGCTSFISEATKCVIDVMKNVIAPHPSCCKAISKLNECSSEFLKNVPSADMDLIKGICALWG
        ASMK+ L+FLV I +L LP +A T    D F  +DF+ + CT F  EATKC+IDVMKN + PHPSCC+AI KLN+C+ E  K+VPSAD +L+K ICALWG
Subjt:  ASMKLALVFLVSIVVLALPAIACTAPVPDSFTTEDFSLLGCTSFISEATKCVIDVMKNVIAPHPSCCKAISKLNECSSEFLKNVPSADMDLIKGICALWG

Query:  V
        V
Subjt:  V

KAE8653021.1 hypothetical protein Csa_004567 [Cucumis sativus]1.6e-3273.08Show/hide
Query:  MASMKLALVFLVSIVVLALPAIACTAPV--PDSFTTEDFSLLGCTSFISEATKCVIDVMKNVIAPHPSCCKAISKLNECSSEFLKNVPSADMDLIKGICA
        MASMKL LVFLV I +LA+  +A T  +   D FT E+FSLLGCTSFISEAT C++DVMKN +APHPSCCKA SKLN+CSSEFLK +PSADM LIKGICA
Subjt:  MASMKLALVFLVSIVVLALPAIACTAPV--PDSFTTEDFSLLGCTSFISEATKCVIDVMKNVIAPHPSCCKAISKLNECSSEFLKNVPSADMDLIKGICA

Query:  LWGV
        LWGV
Subjt:  LWGV

KAG6589812.1 hypothetical protein SDJN03_15235, partial [Cucurbita argyrosperma subsp. sororia]7.9e-2767.68Show/hide
Query:  MKLALVFLVSIVVLALPAIACTAPVPDSFTTEDFSLLGCTSFISEATKCVIDVMKNVIAPHPSCCKAISKLNECSSEFLKNVPSADMDLIKGICALWGV
        MKLA   LV I +LA PA+A     PD F  E FSL GCTS +SE TKCV+DVMK  +APHPSCC+AISKLN CSS FLK+VPSADM LIK +CALWGV
Subjt:  MKLALVFLVSIVVLALPAIACTAPVPDSFTTEDFSLLGCTSFISEATKCVIDVMKNVIAPHPSCCKAISKLNECSSEFLKNVPSADMDLIKGICALWGV

TYK10330.1 hypothetical protein E5676_scaffold367G00010 [Cucumis melo var. makuwa]1.8e-3173.08Show/hide
Query:  MASMKLALVFLVSIVVLALPAIACT--APVPDSFTTEDFSLLGCTSFISEATKCVIDVMKNVIAPHPSCCKAISKLNECSSEFLKNVPSADMDLIKGICA
        MAS+KL LVF V + +LA+  IA T  A   D FT E+ SLLGCTSFISEATKCVIDVMKN +APHPSCCKA SKLN+CS EFLK +PSADM LIKGICA
Subjt:  MASMKLALVFLVSIVVLALPAIACT--APVPDSFTTEDFSLLGCTSFISEATKCVIDVMKNVIAPHPSCCKAISKLNECSSEFLKNVPSADMDLIKGICA

Query:  LWGV
        LWGV
Subjt:  LWGV

TrEMBL top hitse value%identityAlignment
A0A0A0LTE1 Uncharacterized protein3.3e-2356.44Show/hide
Query:  MASMKLALVFLVSIVVLALPAIACTAPVPDSFTTEDFSLLGCTSFISEATKCVIDVMKNVIAPHPSCCKAISKLNECSSEFLKNVPSADMDLIKGICALW
        +AS+KL ++FLV I +LALP +  T    D F+T+D + + CT F  EATKC+IDVMKN + PHPSCC+AI KLN+C+ E  K+VPS D  LIK IC LW
Subjt:  MASMKLALVFLVSIVVLALPAIACTAPVPDSFTTEDFSLLGCTSFISEATKCVIDVMKNVIAPHPSCCKAISKLNECSSEFLKNVPSADMDLIKGICALW

Query:  G
        G
Subjt:  G

A0A5A7U471 Uncharacterized protein4.6e-2559.41Show/hide
Query:  ASMKLALVFLVSIVVLALPAIACTAPVPDSFTTEDFSLLGCTSFISEATKCVIDVMKNVIAPHPSCCKAISKLNECSSEFLKNVPSADMDLIKGICALWG
        ASMK+ L+FLV I +L LP +A T    D F  +DF+ + CT F  EATKC+IDVMKN + PHPSCC+AI KLN+C+ E  K+VPSAD +L+K ICALWG
Subjt:  ASMKLALVFLVSIVVLALPAIACTAPVPDSFTTEDFSLLGCTSFISEATKCVIDVMKNVIAPHPSCCKAISKLNECSSEFLKNVPSADMDLIKGICALWG

Query:  V
        V
Subjt:  V

A0A5A7U483 Uncharacterized protein1.9e-3173.08Show/hide
Query:  MASMKLALVFLVSIVVLALPAIACT--APVPDSFTTEDFSLLGCTSFISEATKCVIDVMKNVIAPHPSCCKAISKLNECSSEFLKNVPSADMDLIKGICA
        MAS+KL LVF V + +LA+  IA T  A   D FT E  SLLGCTSFISEATKCVIDVMKN +APHPSCCKA SKLN+CS EFLK +PSADM LIKGICA
Subjt:  MASMKLALVFLVSIVVLALPAIACT--APVPDSFTTEDFSLLGCTSFISEATKCVIDVMKNVIAPHPSCCKAISKLNECSSEFLKNVPSADMDLIKGICA

Query:  LWGV
        LWGV
Subjt:  LWGV

A0A5A7U9B0 Uncharacterized protein2.6e-2358.82Show/hide
Query:  ASMKLALVFLVSIVVLALPAIAC-TAPVPDSFTTEDFSLLGCTSFISEATKCVIDVMKNVIAPHPSCCKAISKLNECSSEFLKNVPSADMDLIKGICALW
        A  KL LV  V I +LA    AC T     + T+EDFSL  C SF+ +ATKCVIDV+KNV+APHPSCC+AI++L++CSS+FLK++PS DM L+K ICA W
Subjt:  ASMKLALVFLVSIVVLALPAIAC-TAPVPDSFTTEDFSLLGCTSFISEATKCVIDVMKNVIAPHPSCCKAISKLNECSSEFLKNVPSADMDLIKGICALW

Query:  GV
        GV
Subjt:  GV

A0A5D3CG41 Uncharacterized protein8.7e-3273.08Show/hide
Query:  MASMKLALVFLVSIVVLALPAIACT--APVPDSFTTEDFSLLGCTSFISEATKCVIDVMKNVIAPHPSCCKAISKLNECSSEFLKNVPSADMDLIKGICA
        MAS+KL LVF V + +LA+  IA T  A   D FT E+ SLLGCTSFISEATKCVIDVMKN +APHPSCCKA SKLN+CS EFLK +PSADM LIKGICA
Subjt:  MASMKLALVFLVSIVVLALPAIACT--APVPDSFTTEDFSLLGCTSFISEATKCVIDVMKNVIAPHPSCCKAISKLNECSSEFLKNVPSADMDLIKGICA

Query:  LWGV
        LWGV
Subjt:  LWGV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCAATGAAGCTTGCACTTGTATTCCTAGTCTCCATAGTCGTTTTAGCATTACCCGCAATAGCATGCACCGCGCCAGTGCCTGATTCGTTCACAACAGAAGATTT
CTCATTGTTGGGCTGCACATCGTTTATTTCCGAGGCGACGAAATGTGTGATTGATGTGATGAAGAATGTGATTGCTCCTCATCCATCATGTTGCAAAGCCATTTCGAAAC
TCAATGAATGTTCCTCCGAGTTTCTCAAAAACGTTCCTTCGGCTGACATGGATTTGATTAAAGGCATTTGTGCTTTGTGGGGTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTCAATGAAGCTTGCACTTGTATTCCTAGTCTCCATAGTCGTTTTAGCATTACCCGCAATAGCATGCACCGCGCCAGTGCCTGATTCGTTCACAACAGAAGATTT
CTCATTGTTGGGCTGCACATCGTTTATTTCCGAGGCGACGAAATGTGTGATTGATGTGATGAAGAATGTGATTGCTCCTCATCCATCATGTTGCAAAGCCATTTCGAAAC
TCAATGAATGTTCCTCCGAGTTTCTCAAAAACGTTCCTTCGGCTGACATGGATTTGATTAAAGGCATTTGTGCTTTGTGGGGTGTTTGA
Protein sequenceShow/hide protein sequence
MASMKLALVFLVSIVVLALPAIACTAPVPDSFTTEDFSLLGCTSFISEATKCVIDVMKNVIAPHPSCCKAISKLNECSSEFLKNVPSADMDLIKGICALWGV