; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi06G010330 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G010330
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr06:20473064..20474895
RNA-Seq ExpressionLsi06G010330
SyntenyLsi06G010330
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050064.1 hypothetical protein E6C27_scaffold675G00450 [Cucumis melo var. makuwa]1.0e-3168.93Show/hide
Query:  KSISTSTIKISLIFLVCVAILAPSTTAHTVEAAPSPFVF---EDLSFSNCTPFILDATMCVVSVIKLPTGAHPSCCKAISELNDCSSEIYQHIPGMDVIK
        KS S STI+++L+FLVC+ ILAPS TAHT+  APSP +    +D SFSNC PFIL+ATMC+V VIKLP   HPSCCKAIS+LNDC+ EIY HIPGMDVIK
Subjt:  KSISTSTIKISLIFLVCVAILAPSTTAHTVEAAPSPFVF---EDLSFSNCTPFILDATMCVVSVIKLPTGAHPSCCKAISELNDCSSEIYQHIPGMDVIK

Query:  KFC
        K C
Subjt:  KFC

KAA0050068.1 hypothetical protein E6C27_scaffold675G00490 [Cucumis melo var. makuwa]4.9e-3475.49Show/hide
Query:  KTKSISTSTIKISLIFLVCVAILAPSTTAHTVEAAPSPFVFEDLSFSNCTPFILDATMCVVSVIKLPTGAHPSCCKAISELNDCSSEIYQHIPGMDVIKK
        + + +ST  +KISL FLV +AILAPS TA TV AAPSP   EDLSFSNCTPFILDATMCVVSVIK P   HPSCCKAIS+LNDCS E+YQHIPGMDVIKK
Subjt:  KTKSISTSTIKISLIFLVCVAILAPSTTAHTVEAAPSPFVFEDLSFSNCTPFILDATMCVVSVIKLPTGAHPSCCKAISELNDCSSEIYQHIPGMDVIKK

Query:  FC
         C
Subjt:  FC

KAA0050079.1 hypothetical protein E6C27_scaffold675G00630 [Cucumis melo var. makuwa]1.7e-3166.36Show/hide
Query:  ASTTKLPLVLLLCFAILASSSITACSETVPAAAPDPSVTKDFSLFPCISFVPEATECMIDVLKHAIVPHPSCCKAIAKLYDCSSEFLKDIPSSDMILIKG
        ++ TKLPLVL +C AILA SS+TAC   V AA P    ++DFSLFPCISFVP+AT+C+IDVLK+ + PHPSCC+AI +L+DCSS+FLKDIPS DMIL+K 
Subjt:  ASTTKLPLVLLLCFAILASSSITACSETVPAAAPDPSVTKDFSLFPCISFVPEATECMIDVLKHAIVPHPSCCKAIAKLYDCSSEFLKDIPSSDMILIKG

Query:  VCAMWGVFIS
        +CA WGV IS
Subjt:  VCAMWGVFIS

TYK10344.1 hypothetical protein E5676_scaffold367G00200 [Cucumis melo var. makuwa]2.7e-3269.9Show/hide
Query:  KSISTSTIKISLIFLVCVAILAPSTTAHTVEAAPSPFVF---EDLSFSNCTPFILDATMCVVSVIKLPTGAHPSCCKAISELNDCSSEIYQHIPGMDVIK
        KS S STI+++L+FLVC+ ILAPS TAHT+  APSP +    +D SFSNC PFIL+ATMC+V VIKLP   HPSCCKAIS+LNDC+ EIYQHIPGMDVIK
Subjt:  KSISTSTIKISLIFLVCVAILAPSTTAHTVEAAPSPFVF---EDLSFSNCTPFILDATMCVVSVIKLPTGAHPSCCKAISELNDCSSEIYQHIPGMDVIK

Query:  KFC
        K C
Subjt:  KFC

TYK10345.1 hypothetical protein E5676_scaffold367G00210 [Cucumis melo var. makuwa]7.8e-3268.18Show/hide
Query:  ASTTKLPLVLLLCFAILASSSITACSETVPAAAPDPSVTKDFSLFPCISFVPEATECMIDVLKHAIVPHPSCCKAIAKLYDCSSEFLKDIPSSDMILIKG
        ++ TKLPLVLL+C AILA SS+TA    V AA P    ++DFSLFPCISFVP+AT+C+IDVLK+A+ PHPSCC+AI++L+DCSS+FLKDIPSSDMIL+K 
Subjt:  ASTTKLPLVLLLCFAILASSSITACSETVPAAAPDPSVTKDFSLFPCISFVPEATECMIDVLKHAIVPHPSCCKAIAKLYDCSSEFLKDIPSSDMILIKG

Query:  VCAMWGVFIS
        +CA WGV IS
Subjt:  VCAMWGVFIS

TrEMBL top hitse value%identityAlignment
A0A5A7U475 Uncharacterized protein2.4e-3475.49Show/hide
Query:  KTKSISTSTIKISLIFLVCVAILAPSTTAHTVEAAPSPFVFEDLSFSNCTPFILDATMCVVSVIKLPTGAHPSCCKAISELNDCSSEIYQHIPGMDVIKK
        + + +ST  +KISL FLV +AILAPS TA TV AAPSP   EDLSFSNCTPFILDATMCVVSVIK P   HPSCCKAIS+LNDCS E+YQHIPGMDVIKK
Subjt:  KTKSISTSTIKISLIFLVCVAILAPSTTAHTVEAAPSPFVFEDLSFSNCTPFILDATMCVVSVIKLPTGAHPSCCKAISELNDCSSEIYQHIPGMDVIKK

Query:  FC
         C
Subjt:  FC

A0A5A7U4A7 Uncharacterized protein4.9e-3268.93Show/hide
Query:  KSISTSTIKISLIFLVCVAILAPSTTAHTVEAAPSPFVF---EDLSFSNCTPFILDATMCVVSVIKLPTGAHPSCCKAISELNDCSSEIYQHIPGMDVIK
        KS S STI+++L+FLVC+ ILAPS TAHT+  APSP +    +D SFSNC PFIL+ATMC+V VIKLP   HPSCCKAIS+LNDC+ EIY HIPGMDVIK
Subjt:  KSISTSTIKISLIFLVCVAILAPSTTAHTVEAAPSPFVF---EDLSFSNCTPFILDATMCVVSVIKLPTGAHPSCCKAISELNDCSSEIYQHIPGMDVIK

Query:  KFC
        K C
Subjt:  KFC

A0A5A7U9B0 Uncharacterized protein8.4e-3266.36Show/hide
Query:  ASTTKLPLVLLLCFAILASSSITACSETVPAAAPDPSVTKDFSLFPCISFVPEATECMIDVLKHAIVPHPSCCKAIAKLYDCSSEFLKDIPSSDMILIKG
        ++ TKLPLVL +C AILA SS+TAC   V AA P    ++DFSLFPCISFVP+AT+C+IDVLK+ + PHPSCC+AI +L+DCSS+FLKDIPS DMIL+K 
Subjt:  ASTTKLPLVLLLCFAILASSSITACSETVPAAAPDPSVTKDFSLFPCISFVPEATECMIDVLKHAIVPHPSCCKAIAKLYDCSSEFLKDIPSSDMILIKG

Query:  VCAMWGVFIS
        +CA WGV IS
Subjt:  VCAMWGVFIS

A0A5D3CFS6 Uncharacterized protein3.8e-3268.18Show/hide
Query:  ASTTKLPLVLLLCFAILASSSITACSETVPAAAPDPSVTKDFSLFPCISFVPEATECMIDVLKHAIVPHPSCCKAIAKLYDCSSEFLKDIPSSDMILIKG
        ++ TKLPLVLL+C AILA SS+TA    V AA P    ++DFSLFPCISFVP+AT+C+IDVLK+A+ PHPSCC+AI++L+DCSS+FLKDIPSSDMIL+K 
Subjt:  ASTTKLPLVLLLCFAILASSSITACSETVPAAAPDPSVTKDFSLFPCISFVPEATECMIDVLKHAIVPHPSCCKAIAKLYDCSSEFLKDIPSSDMILIKG

Query:  VCAMWGVFIS
        +CA WGV IS
Subjt:  VCAMWGVFIS

A0A5D3CGL7 Uncharacterized protein1.3e-3269.9Show/hide
Query:  KSISTSTIKISLIFLVCVAILAPSTTAHTVEAAPSPFVF---EDLSFSNCTPFILDATMCVVSVIKLPTGAHPSCCKAISELNDCSSEIYQHIPGMDVIK
        KS S STI+++L+FLVC+ ILAPS TAHT+  APSP +    +D SFSNC PFIL+ATMC+V VIKLP   HPSCCKAIS+LNDC+ EIYQHIPGMDVIK
Subjt:  KSISTSTIKISLIFLVCVAILAPSTTAHTVEAAPSPFVF---EDLSFSNCTPFILDATMCVVSVIKLPTGAHPSCCKAISELNDCSSEIYQHIPGMDVIK

Query:  KFC
        K C
Subjt:  KFC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGACCAAGTCTATCAGCACATCCACAATAAAGATATCACTTATATTCCTAGTATGCGTTGCCATTTTGGCACCATCAACGACGGCTCACACGGTGGAAGCAGCACC
TAGTCCATTTGTATTCGAAGATTTATCTTTCTCTAACTGCACACCCTTTATCTTAGATGCGACAATGTGTGTGGTAAGTGTGATCAAACTTCCAACTGGTGCTCATCCTT
CTTGTTGCAAAGCCATTTCTGAGCTCAATGATTGCTCCTCCGAAATTTACCAACATATTCCCGGCATGGATGTGATTAAGAAATTTTGTGTACCAACGATGGCAGCATCA
ACCACCAAGTTACCACTAGTACTCCTACTTTGCTTTGCCATTTTAGCATCATCATCAATAACGGCTTGTTCAGAAACGGTGCCCGCAGCAGCACCTGATCCATCTGTAAC
GAAGGACTTCTCTTTATTCCCATGCATATCATTTGTTCCTGAGGCGACGGAATGTATGATTGATGTGCTTAAGCATGCAATTGTTCCTCATCCTTCTTGTTGCAAAGCCA
TTGCTAAACTCTATGATTGTTCATCCGAGTTTCTCAAAGATATTCCCTCCTCCGATATGATTTTGATTAAGGGTGTTTGTGCTATGTGGGGAGTTTTTATTTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGACCAAGTCTATCAGCACATCCACAATAAAGATATCACTTATATTCCTAGTATGCGTTGCCATTTTGGCACCATCAACGACGGCTCACACGGTGGAAGCAGCACC
TAGTCCATTTGTATTCGAAGATTTATCTTTCTCTAACTGCACACCCTTTATCTTAGATGCGACAATGTGTGTGGTAAGTGTGATCAAACTTCCAACTGGTGCTCATCCTT
CTTGTTGCAAAGCCATTTCTGAGCTCAATGATTGCTCCTCCGAAATTTACCAACATATTCCCGGCATGGATGTGATTAAGAAATTTTGTGTACCAACGATGGCAGCATCA
ACCACCAAGTTACCACTAGTACTCCTACTTTGCTTTGCCATTTTAGCATCATCATCAATAACGGCTTGTTCAGAAACGGTGCCCGCAGCAGCACCTGATCCATCTGTAAC
GAAGGACTTCTCTTTATTCCCATGCATATCATTTGTTCCTGAGGCGACGGAATGTATGATTGATGTGCTTAAGCATGCAATTGTTCCTCATCCTTCTTGTTGCAAAGCCA
TTGCTAAACTCTATGATTGTTCATCCGAGTTTCTCAAAGATATTCCCTCCTCCGATATGATTTTGATTAAGGGTGTTTGTGCTATGTGGGGAGTTTTTATTTCTTAG
Protein sequenceShow/hide protein sequence
MKTKSISTSTIKISLIFLVCVAILAPSTTAHTVEAAPSPFVFEDLSFSNCTPFILDATMCVVSVIKLPTGAHPSCCKAISELNDCSSEIYQHIPGMDVIKKFCVPTMAAS
TTKLPLVLLLCFAILASSSITACSETVPAAAPDPSVTKDFSLFPCISFVPEATECMIDVLKHAIVPHPSCCKAIAKLYDCSSEFLKDIPSSDMILIKGVCAMWGVFIS