CuGenDBv2

Gene ID	Lsi06G010560
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Eukaryotic translation initiation factor 6
Genome location	chr06:20791878..20795698
RNA-Seq Expression	Lsi06G010560
Synteny	Lsi06G010560
Gene Ontology terms	GO:0000054 - ribosomal subunit export from nucleus (biological process) GO:0000460 - maturation of 5.8S rRNA (biological process) GO:0000470 - maturation of LSU-rRNA (biological process) GO:0006413 - translational initiation (biological process) GO:0042256 - mature ribosome assembly (biological process) GO:1902626 - assembly of large subunit precursor of preribosome (biological process) GO:0005730 - nucleolus (cellular component) GO:0005829 - cytosol (cellular component) GO:0030687 - preribosome, large subunit precursor (cellular component) GO:0003743 - translation initiation factor activity (molecular function) GO:0043022 - ribosome binding (molecular function) GO:0043023 - ribosomal large subunit binding (molecular function)
InterPro domains	IPR002769 - Translation initiation factor IF6

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022147757.1 eukaryotic translation initiation factor 6-2 [Momordica charantia]

1.1e-116

91.02

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER
        MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFE+ELGGVIPVVK SIDGTRIIGRLCA               ELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGNTIACNDHVAL HTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYC+FTNRGGLVHPHTS+EDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV
        DW AFCGSDTTATELSVIESVFKLREAQPSSIV+EMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV

XP_022931983.1 eukaryotic translation initiation factor 6-2-like [Cucurbita moschata]

4.9e-117

91.02

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER
        MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFE+ELGGVIPVVKTSIDGTRIIGRLCA               ELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGNTI+CNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYC+FTNRGGLVHPHTS+EDLDELSTLLQVPLVAGTVNRGSEVIAAGL AN
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV
        DWTAFCGSDTTATELSVIESVFKLRE QPSSIV+EMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV

XP_022973842.1 eukaryotic translation initiation factor 6-2 [Cucurbita maxima]

1.7e-117

91.43

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER
        MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFE+ELGGVIPVVKTSIDGTRIIGRLCA               ELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGNTI+CNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYC+FTNRGGLVHPHTS+EDLDELSTLLQVPLVAGTVNRGSEVIAAGL AN
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV
        DWTAFCGSDTTATELSVIESVFKLREAQPSSIV+EMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV

XP_038880643.1 eukaryotic translation initiation factor 6-2-like [Benincasa hispida]

3.4e-118

92.65

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER
        MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVK SIDGTRIIGRLCA               ELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYC+FTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV
        DW AFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV

XP_038900322.1 eukaryotic translation initiation factor 6-2 [Benincasa hispida]

2.0e-118

92.65

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER
        MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS FETELGGVIPVVK SIDGTRIIGRLCA               ELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYC+FTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV
        DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV

TrEMBL top hits

e value

%identity

Alignment

A0A6J1D392 Eukaryotic translation initiation factor 6

5.2e-117

91.02

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER
        MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFE+ELGGVIPVVK SIDGTRIIGRLCA               ELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGNTIACNDHVAL HTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYC+FTNRGGLVHPHTS+EDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV
        DW AFCGSDTTATELSVIESVFKLREAQPSSIV+EMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV

A0A6J1F0A8 Eukaryotic translation initiation factor 6

2.4e-117

91.02

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER
        MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFE+ELGGVIPVVKTSIDGTRIIGRLCA               ELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGNTI+CNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYC+FTNRGGLVHPHTS+EDLDELSTLLQVPLVAGTVNRGSEVIAAGL AN
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV
        DWTAFCGSDTTATELSVIESVFKLRE QPSSIV+EMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV

A0A6J1G8F7 Eukaryotic translation initiation factor 6

7.6e-116

89.8

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER
        MA RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS+FE EL GVIPVVKTSIDGTRIIGRLCA               ELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYC+FTNRGGLVHPHTS+EDLDELSTLLQVPLVAGTVNRGSEVIAAGL  N
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV
        DWTAFCGSDTTATELSV+ESVFKLREAQPSSIV+EMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV

A0A6J1I8L9 Eukaryotic translation initiation factor 6

8.1e-118

91.43

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER
        MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFE+ELGGVIPVVKTSIDGTRIIGRLCA               ELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGNTI+CNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYC+FTNRGGLVHPHTS+EDLDELSTLLQVPLVAGTVNRGSEVIAAGL AN
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV
        DWTAFCGSDTTATELSVIESVFKLREAQPSSIV+EMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV

A0A6J1L2F0 Eukaryotic translation initiation factor 6

7.6e-116

89.8

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER
        MA RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS+FE EL GVIPVVKTSIDGTRIIGRLCA               ELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYC+FTNRGGLVHPHTS+EDLDELSTLLQVPLVAGTVNRGSEVIAAGL  N
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV
        DWTAFCGSDTTATELSV+ESVFKLREAQPSSIV+EMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV

SwissProt top hits

e value

%identity

Alignment

O55135 Eukaryotic translation initiation factor 6

2.8e-91

70.37

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER
        MA R  FEN+CE+G F+KLTNAYCLVAIGGSENFYS FE EL   IPVV  SI G RIIGR+C                ELQH+RNSLPD V ++R++ER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGN   CND+VAL H DLDRETEE++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TS+ED DELS+LLQVPLVAGTVNRGSEVIAAG+  N
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS
        DW AFCG DTT+TELSV+ESVFKL EA+PS+I   MR SLIDS
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS

P56537 Eukaryotic translation initiation factor 6

2.8e-91

70.78

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER
        MA R  FEN+CEIG F+KLTN YCLVAIGGSENFYS FE EL   IPVV  SI G RIIGR+C                ELQH+RNSLPD V ++R++ER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGN   CND+VAL H DLDRETEE++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TS+ED DELS+LLQVPLVAGTVNRGSEVIAAG+  N
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS
        DW AFCG DTT+TELSV+ESVFKL EAQPS+I   MR SLIDS
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS

Q3KRD8 Eukaryotic translation initiation factor 6

8.1e-91

69.96

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER
        MA R  FEN+CE+G F+KLTN YCLVAIGGSENFYS FE EL   IPVV  SI G RIIGR+C                ELQH+RNSLPD V ++R++ER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGN   CND+VAL H DLDRETEE++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TS+ED DELS+LLQVPLVAGTVNRGSEVIAAG+  N
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS
        DW AFCG DTT+TELSV+ESVFKL EA+PS+I   MR SLIDS
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS

Q9M060 Eukaryotic translation initiation factor 6-2

2.7e-110

82.04

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER
        MATRL FEN+CE+GVFSKLTNAYCLVAIGGSENFYSAFE+EL  VIP+VKTSI GTRIIGRLCA               ELQHLRNSLPDQVVVQRI ER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGN IACND+VAL HTDLD+ETEE+IADVLGVEVFRQT+AGN+LVGSYC  +N+GG+VHPHTSVEDL+ELSTLLQVPLVAGTVNRGSEVIAAG+T N
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV
        DWT+FCGSDTTATELSVI+S+FKLREAQPSSIV+EMRKSLID+YV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV

Q9TU47 Eukaryotic translation initiation factor 6

9.6e-92

70.78

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER
        MA R  FEN+CEIG F+KLTN+YCLVAIGGSENFYS FE EL G IPVV  SI G RIIGR+C                ELQH+RN LPD V ++R++ER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGN   CND+VAL H DLDRETEE++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TS+ED DELS+LLQVPLVAGTVNRGSEVIAAG+  N
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS
        DW AFCG DTT+TELSV+ESVFKL EAQPS+I   MR SLIDS
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS

Arabidopsis top hits

e value

%identity

Alignment

AT2G39820.1 Translation initiation factor IF6

7.5e-84

63.16

Show/hide

Query:  MATRLMFE-NSCEIGVFSKLTNAYCLV-AIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQ
        MATRL ++ N+CEIGVFSKLTNAYCLV A   S NF++ +E++L GVIP+V TSI G+  IG LC                ELQHLR+SLPD+VVVQRI+
Subjt:  MATRLMFE-NSCEIGVFSKLTNAYCLV-AIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQ

Query:  ERLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLT
        E + ALGN IACND+VAL H  L+++TEE+I+DVLGVEV+RQT+A N LVGSYC+ +N GG+VH +T+VE++ EL+ L+QVPLVAGTVNRGS+VI+AGLT
Subjt:  ERLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLT

Query:  ANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV
         NDWTAFCGSDTTA ELSV+ ++FKL ++QP  +  EMRKSLID+YV
Subjt:  ANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV

AT3G55620.1 Translation initiation factor IF6

1.9e-111

82.04

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER
        MATRL FEN+CE+GVFSKLTNAYCLVAIGGSENFYSAFE+EL  VIP+VKTSI GTRIIGRLCA               ELQHLRNSLPDQVVVQRI ER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCA---------------ELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN
        LSALGN IACND+VAL HTDLD+ETEE+IADVLGVEVFRQT+AGN+LVGSYC  +N+GG+VHPHTSVEDL+ELSTLLQVPLVAGTVNRGSEVIAAG+T N
Subjt:  LSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTAN

Query:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV
        DWT+FCGSDTTATELSVI+S+FKLREAQPSSIV+EMRKSLID+YV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV

Sequences

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CDS sequence

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ATGGCGACCAGGCTTATGTTTGAGAACTCTTGTGAAATTGGGGTTTTCTCCAAGCTCACTAATGCTTACTGCTTGGTTGCAATTGGTGGCTCTGAGAATTTCTACAGTGC
CTTTGAAACTGAATTAGGTGGTGTCATTCCGGTTGTTAAAACATCTATTGATGGCACTCGCATTATTGGCCGTCTTTGTGCTGAACTTCAGCACTTGAGGAACAGTCTAC
CAGACCAAGTTGTTGTTCAACGTATACAAGAGAGACTATCTGCTTTGGGGAATACAATTGCTTGTAATGATCATGTTGCTCTCACGCATACTGATCTTGATCGGGAAACT
GAAGAGCTCATTGCTGATGTTCTTGGAGTAGAGGTCTTTAGGCAGACAGTAGCGGGCAACGTTCTCGTGGGAAGCTACTGTAATTTCACAAATAGGGGTGGCTTGGTTCA
TCCACATACATCTGTTGAGGATTTGGACGAGCTATCAACCCTTCTTCAAGTCCCTTTAGTTGCTGGAACCGTGAATCGTGGAAGTGAAGTGATTGCTGCTGGATTGACAG
CAAATGACTGGACTGCATTTTGTGGTTCCGACACCACTGCCACCGAGTTATCGGTCATCGAGAGCGTTTTCAAATTGAGGGAGGCTCAACCAAGTTCCATTGTTGAAGAA
ATGAGGAAGTCGCTAATAGACAGTTACGTGTGA

mRNA sequence

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AAGCAGCAGCCGTGAACCGTAAATTCTCTCTCCCTCTTACCCGCCCACACGCCCCTCTCATACGCTTCTATCTCTCAAGCTCGCGCATCTGCAAGCCGCTCGCCTCCGTC
CAACTGCCGCCACCGTCGACTGGAGTCCGCCGCTGCCTCGCCACCGCTAATGTTCGCTGCCACAGGTTCGCCGCCATCGTAAAGTCGCCGCTGTTCGTCCTCGAGCCCCC
GCCAAATTCGGTATTGTGCAGTGAGGGTTGCAAGGGACTTTGAGTTTATAGTCAAGGGAGGCAGTTGTTGATTGTTCAAGGTTATCGTGTGCTACTTATGGCGACCAGGC
TTATGTTTGAGAACTCTTGTGAAATTGGGGTTTTCTCCAAGCTCACTAATGCTTACTGCTTGGTTGCAATTGGTGGCTCTGAGAATTTCTACAGTGCCTTTGAAACTGAA
TTAGGTGGTGTCATTCCGGTTGTTAAAACATCTATTGATGGCACTCGCATTATTGGCCGTCTTTGTGCTGAACTTCAGCACTTGAGGAACAGTCTACCAGACCAAGTTGT
TGTTCAACGTATACAAGAGAGACTATCTGCTTTGGGGAATACAATTGCTTGTAATGATCATGTTGCTCTCACGCATACTGATCTTGATCGGGAAACTGAAGAGCTCATTG
CTGATGTTCTTGGAGTAGAGGTCTTTAGGCAGACAGTAGCGGGCAACGTTCTCGTGGGAAGCTACTGTAATTTCACAAATAGGGGTGGCTTGGTTCATCCACATACATCT
GTTGAGGATTTGGACGAGCTATCAACCCTTCTTCAAGTCCCTTTAGTTGCTGGAACCGTGAATCGTGGAAGTGAAGTGATTGCTGCTGGATTGACAGCAAATGACTGGAC
TGCATTTTGTGGTTCCGACACCACTGCCACCGAGTTATCGGTCATCGAGAGCGTTTTCAAATTGAGGGAGGCTCAACCAAGTTCCATTGTTGAAGAAATGAGGAAGTCGC
TAATAGACAGTTACGTGTGAGAAGTCTCCTCTGCTACACCTAAGATTTTGCAAGCAATTAATTGTTATTACTCTGCTGTCTTTTCCCTTCGGTTATATTTAACAACTTTG
TGAGTATGAAATTCAACTCTGCACTTACATAGCGTTTTGATTGAAATTGGGATCCATATTGTTCTATTTGTATAAACCATAATTTTGTTTCAAAGTTCCTTCTGTTACAG
TTTGTCTACAAATAACTACTAAACTGGGCTATCTATTGATAGACATAGAGTAACCAAAAGGTGAAAAACAGGAGACAGTTCATTTTGTAAAATCAACATTTGAAGAAGTT
TACACACATTTAAGAATCAATGTAAG

Protein sequence

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MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKTSIDGTRIIGRLCAELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDRET
EELIADVLGVEVFRQTVAGNVLVGSYCNFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEE
MRKSLIDSYV

Lsi06G010560 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome