; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi06G010660 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G010660
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionSerine-rich protein-related
Genome locationchr06:20892712..20893050
RNA-Seq ExpressionLsi06G010660
SyntenyLsi06G010660
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022921799.1 uncharacterized protein LOC111429944 [Cucurbita moschata]5.0e-4383.04Show/hide
Query:  MASKSGSSNPKLPTIGGSRKCLCSPTTHPGSFRCSFHRNRRKVSSARSSSSISAITTAQLELAMFAKTNSLRAFLLQMIKPSSNDLQRRRNFHPKPSRFC
        MASKSGSSNPKL +IGGSRKCLCSPTTHPGSFRCS HRNRRKVS+  SSSSI+AITTAQL+L M AK N+LR+FL Q+I PSS DLQRRRNF PKPSRFC
Subjt:  MASKSGSSNPKLPTIGGSRKCLCSPTTHPGSFRCSFHRNRRKVSSARSSSSISAITTAQLELAMFAKTNSLRAFLLQMIKPSSNDLQRRRNFHPKPSRFC

Query:  LMNNHGTGLTVS
        LMNNHGTGL VS
Subjt:  LMNNHGTGLTVS

XP_022927032.1 uncharacterized protein LOC111433980 [Cucurbita moschata]1.0e-4077.68Show/hide
Query:  MASKSGSSNPKLPTIGGSRKCLCSPTTHPGSFRCSFHRNRRKVSSARSSSSISAITTAQLELAMFAKTNSLRAFLLQMIKPSSNDLQRRRNFHPKPSRFC
        MA+KS S N KL ++G SRKCLCSPTTHPGSFRCSFHRNRRK S+  SSSSI+AIT+AQLEL +FAK N++RAFLL +I+PSSNDLQRRRNFHP+PSRFC
Subjt:  MASKSGSSNPKLPTIGGSRKCLCSPTTHPGSFRCSFHRNRRKVSSARSSSSISAITTAQLELAMFAKTNSLRAFLLQMIKPSSNDLQRRRNFHPKPSRFC

Query:  LMNNHGTGLTVS
        LMN HGTGL VS
Subjt:  LMNNHGTGLTVS

XP_023003805.1 uncharacterized protein LOC111497277 [Cucurbita maxima]4.0e-4077.68Show/hide
Query:  MASKSGSSNPKLPTIGGSRKCLCSPTTHPGSFRCSFHRNRRKVSSARSSSSISAITTAQLELAMFAKTNSLRAFLLQMIKPSSNDLQRRRNFHPKPSRFC
        MA+KS S+N KL ++G SRKCLCSPTTHPGSFRCSFHRNRRK S+  SSSSISAIT+AQLEL +FAK N++RAFLL +I+PSSNDLQRRRNF P+PSRFC
Subjt:  MASKSGSSNPKLPTIGGSRKCLCSPTTHPGSFRCSFHRNRRKVSSARSSSSISAITTAQLELAMFAKTNSLRAFLLQMIKPSSNDLQRRRNFHPKPSRFC

Query:  LMNNHGTGLTVS
        LMN HGTGL VS
Subjt:  LMNNHGTGLTVS

XP_023515429.1 uncharacterized protein LOC111779591 [Cucurbita pepo subsp. pepo]1.0e-4383.93Show/hide
Query:  MASKSGSSNPKLPTIGGSRKCLCSPTTHPGSFRCSFHRNRRKVSSARSSSSISAITTAQLELAMFAKTNSLRAFLLQMIKPSSNDLQRRRNFHPKPSRFC
        MASKSGSSNPKL +IGGSRKCLCSPTTHPGSFRCS HRNRRKVS+  SSSSI+AITTAQL+L M AK N+LR+FLLQ+I PSS DLQRRRNF PKPSRFC
Subjt:  MASKSGSSNPKLPTIGGSRKCLCSPTTHPGSFRCSFHRNRRKVSSARSSSSISAITTAQLELAMFAKTNSLRAFLLQMIKPSSNDLQRRRNFHPKPSRFC

Query:  LMNNHGTGLTVS
        LMNNHGTGL VS
Subjt:  LMNNHGTGLTVS

XP_023530962.1 uncharacterized protein LOC111793349 [Cucurbita pepo subsp. pepo]4.0e-4076.79Show/hide
Query:  MASKSGSSNPKLPTIGGSRKCLCSPTTHPGSFRCSFHRNRRKVSSARSSSSISAITTAQLELAMFAKTNSLRAFLLQMIKPSSNDLQRRRNFHPKPSRFC
        MA+KS S N KL ++G SRKCLCSPTTHPGSFRCSFHRNRRK S+  SSSSI+AIT+AQLEL ++AK N++RAFLL +I+PSSNDLQRRRNFHP PSRFC
Subjt:  MASKSGSSNPKLPTIGGSRKCLCSPTTHPGSFRCSFHRNRRKVSSARSSSSISAITTAQLELAMFAKTNSLRAFLLQMIKPSSNDLQRRRNFHPKPSRFC

Query:  LMNNHGTGLTVS
        LMN HGTGL VS
Subjt:  LMNNHGTGLTVS

TrEMBL top hitse value%identityAlignment
A0A0A0LYY6 Uncharacterized protein5.6e-4080.53Show/hide
Query:  MASKSGSSNPKLPTIGGSRKCLCSPTTHPGSFRCSFHRNRRKVSSAR-SSSSISAITTAQLELAMFAKTNSLRAFLLQMIKPSSNDLQRRRNFHPKPSRF
        MASKSGSS  K PT G SRKCLCSPTTHPGSFRCSFHRNR K+SS+R SSSS+S ITTA LEL   AK N+LR+FLLQMIKPSSNDLQRRRNFHP+PSRF
Subjt:  MASKSGSSNPKLPTIGGSRKCLCSPTTHPGSFRCSFHRNRRKVSSAR-SSSSISAITTAQLELAMFAKTNSLRAFLLQMIKPSSNDLQRRRNFHPKPSRF

Query:  CLMNNHGTGLTVS
        CLMN+H TGL VS
Subjt:  CLMNNHGTGLTVS

A0A5A7U6S1 Serine-rich protein-related6.9e-3877.68Show/hide
Query:  MASKSGSSNPKLPTIGGSRKCLCSPTTHPGSFRCSFHRNRRKVSSARSSSSISAITTAQLELAMFAKTNSLRAFLLQMIKPSSNDLQRRRNFHPKPSRFC
        MASKSGSS  K P+  GSRKCLCSPTTHPGSFRCSFHR R K+SS RSSSS      A+LEL   AK N+LRAFLLQMIKPSSND+QRRRNFHP+PSRFC
Subjt:  MASKSGSSNPKLPTIGGSRKCLCSPTTHPGSFRCSFHRNRRKVSSARSSSSISAITTAQLELAMFAKTNSLRAFLLQMIKPSSNDLQRRRNFHPKPSRFC

Query:  LMNNHGTGLTVS
        LMN+HGTGLTVS
Subjt:  LMNNHGTGLTVS

A0A6J1E1K3 uncharacterized protein LOC1114299442.4e-4383.04Show/hide
Query:  MASKSGSSNPKLPTIGGSRKCLCSPTTHPGSFRCSFHRNRRKVSSARSSSSISAITTAQLELAMFAKTNSLRAFLLQMIKPSSNDLQRRRNFHPKPSRFC
        MASKSGSSNPKL +IGGSRKCLCSPTTHPGSFRCS HRNRRKVS+  SSSSI+AITTAQL+L M AK N+LR+FL Q+I PSS DLQRRRNF PKPSRFC
Subjt:  MASKSGSSNPKLPTIGGSRKCLCSPTTHPGSFRCSFHRNRRKVSSARSSSSISAITTAQLELAMFAKTNSLRAFLLQMIKPSSNDLQRRRNFHPKPSRFC

Query:  LMNNHGTGLTVS
        LMNNHGTGL VS
Subjt:  LMNNHGTGLTVS

A0A6J1EG01 uncharacterized protein LOC1114339805.1e-4177.68Show/hide
Query:  MASKSGSSNPKLPTIGGSRKCLCSPTTHPGSFRCSFHRNRRKVSSARSSSSISAITTAQLELAMFAKTNSLRAFLLQMIKPSSNDLQRRRNFHPKPSRFC
        MA+KS S N KL ++G SRKCLCSPTTHPGSFRCSFHRNRRK S+  SSSSI+AIT+AQLEL +FAK N++RAFLL +I+PSSNDLQRRRNFHP+PSRFC
Subjt:  MASKSGSSNPKLPTIGGSRKCLCSPTTHPGSFRCSFHRNRRKVSSARSSSSISAITTAQLELAMFAKTNSLRAFLLQMIKPSSNDLQRRRNFHPKPSRFC

Query:  LMNNHGTGLTVS
        LMN HGTGL VS
Subjt:  LMNNHGTGLTVS

A0A6J1KSU0 uncharacterized protein LOC1114972771.9e-4077.68Show/hide
Query:  MASKSGSSNPKLPTIGGSRKCLCSPTTHPGSFRCSFHRNRRKVSSARSSSSISAITTAQLELAMFAKTNSLRAFLLQMIKPSSNDLQRRRNFHPKPSRFC
        MA+KS S+N KL ++G SRKCLCSPTTHPGSFRCSFHRNRRK S+  SSSSISAIT+AQLEL +FAK N++RAFLL +I+PSSNDLQRRRNF P+PSRFC
Subjt:  MASKSGSSNPKLPTIGGSRKCLCSPTTHPGSFRCSFHRNRRKVSSARSSSSISAITTAQLELAMFAKTNSLRAFLLQMIKPSSNDLQRRRNFHPKPSRFC

Query:  LMNNHGTGLTVS
        LMN HGTGL VS
Subjt:  LMNNHGTGLTVS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G13227.1 serine-rich protein-related9.9e-0553.12Show/hide
Query:  RKCLCSPTTHPGSFRCSFHRNRRKVSSARSSS
        + CLC+PTTHPGSFRC +HR    +  +R +S
Subjt:  RKCLCSPTTHPGSFRCSFHRNRRKVSSARSSS

AT5G11090.1 serine-rich protein-related3.8e-1243.75Show/hide
Query:  SRKCLCSPTTHPGSFRCSFHRNRRKVSSARSSSSISAITTAQLELAMFAKTNSL-----------RAFLLQMIKPSSNDLQRRRNFHPKPSRFCLM
        SR+C+CSPTTHPGSFRCS H+N   V++     + S  TT  L +   A TNSL           R  L  +I+PSS+ L+RR  + P+PSR  +M
Subjt:  SRKCLCSPTTHPGSFRCSFHRNRRKVSSARSSSSISAITTAQLELAMFAKTNSL-----------RAFLLQMIKPSSNDLQRRRNFHPKPSRFCLM

AT5G20370.1 serine-rich protein-related1.5e-0840.2Show/hide
Query:  RKCLCSPTTHPGSFRCSFHRN-RRKVSSARSSSSI--------SAITTAQLELAMFAKTNSL------------RAFLLQMIKPSSNDLQRRRNFHPKPS
        RKCLCSPTTHPGSFRCSFHR    + S   +SS++        +      L L   A  NSL            R+    + KPSS    RR  F P+ S
Subjt:  RKCLCSPTTHPGSFRCSFHRN-RRKVSSARSSSSI--------SAITTAQLELAMFAKTNSL------------RAFLLQMIKPSSNDLQRRRNFHPKPS

Query:  RF
        RF
Subjt:  RF

AT5G25280.1 serine-rich protein-related9.2e-1138.6Show/hide
Query:  MASKSGSSNPKLPTIGGSRKCLCSPTTHPGSFRCSFHRNRRKVSSARSSSSISAITTAQLELAMFAKTNSL-----------RAFLLQMIKPSSNDLQRR
        ++S   S++ K+P     R+C+CSPTTHPGSFRCS H+N   V++     + S  TT  L +   A TNSL           R  L  +I+PSS+ L+RR
Subjt:  MASKSGSSNPKLPTIGGSRKCLCSPTTHPGSFRCSFHRNRRKVSSARSSSSISAITTAQLELAMFAKTNSL-----------RAFLLQMIKPSSNDLQRR

Query:  RNFHPKPSRFCLMN
          + P+ SR   M+
Subjt:  RNFHPKPSRFCLMN

AT5G25280.2 serine-rich protein-related9.2e-1138.6Show/hide
Query:  MASKSGSSNPKLPTIGGSRKCLCSPTTHPGSFRCSFHRNRRKVSSARSSSSISAITTAQLELAMFAKTNSL-----------RAFLLQMIKPSSNDLQRR
        ++S   S++ K+P     R+C+CSPTTHPGSFRCS H+N   V++     + S  TT  L +   A TNSL           R  L  +I+PSS+ L+RR
Subjt:  MASKSGSSNPKLPTIGGSRKCLCSPTTHPGSFRCSFHRNRRKVSSARSSSSISAITTAQLELAMFAKTNSL-----------RAFLLQMIKPSSNDLQRR

Query:  RNFHPKPSRFCLMN
          + P+ SR   M+
Subjt:  RNFHPKPSRFCLMN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCAAAATCTGGATCCTCCAATCCCAAATTGCCGACCATCGGCGGTTCACGGAAGTGTCTCTGTTCTCCGACCACCCATCCCGGCTCTTTCCGCTGCAGTTTTCA
CCGGAACCGTCGCAAGGTCTCTTCGGCTAGGTCATCTTCATCCATTTCCGCCATTACCACTGCGCAATTGGAGCTTGCGATGTTCGCAAAGACGAATTCCTTGAGAGCGT
TTCTTCTGCAGATGATTAAGCCGTCGAGTAACGATCTTCAACGGCGAAGGAATTTTCATCCTAAACCTTCCAGGTTTTGTTTGATGAACAATCATGGAACTGGATTGACT
GTTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTCAAAATCTGGATCCTCCAATCCCAAATTGCCGACCATCGGCGGTTCACGGAAGTGTCTCTGTTCTCCGACCACCCATCCCGGCTCTTTCCGCTGCAGTTTTCA
CCGGAACCGTCGCAAGGTCTCTTCGGCTAGGTCATCTTCATCCATTTCCGCCATTACCACTGCGCAATTGGAGCTTGCGATGTTCGCAAAGACGAATTCCTTGAGAGCGT
TTCTTCTGCAGATGATTAAGCCGTCGAGTAACGATCTTCAACGGCGAAGGAATTTTCATCCTAAACCTTCCAGGTTTTGTTTGATGAACAATCATGGAACTGGATTGACT
GTTTCTTGA
Protein sequenceShow/hide protein sequence
MASKSGSSNPKLPTIGGSRKCLCSPTTHPGSFRCSFHRNRRKVSSARSSSSISAITTAQLELAMFAKTNSLRAFLLQMIKPSSNDLQRRRNFHPKPSRFCLMNNHGTGLT
VS