; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi06G010950 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G010950
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionglycine-rich cell wall structural protein 2-like
Genome locationchr06:21229278..21229655
RNA-Seq ExpressionLsi06G010950
SyntenyLsi06G010950
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_016899784.1 PREDICTED: glycine-rich cell wall structural protein 2-like [Cucumis melo]3.2e-3088.19Show/hide
Query:  MSCFKSLVLAALLVSSLFVLSHSRVARKDLGIDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSGSGSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
        M   KSLVLAALLVSS FV+S SRVARKDLG+DLGGVG+G+G GIGIGLGGSGSGSGSGSGSGSGS SSSSSSSSSSSSGSGS+SGSEAGSYAGSRAGSG
Subjt:  MSCFKSLVLAALLVSSLFVLSHSRVARKDLGIDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSGSGSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG

Query:  SGGR--EGGGSGYGGGYGSGYGGGHGK
        S GR  EGGGSGYGGGYGSGYGGGHGK
Subjt:  SGGR--EGGGSGYGGGYGSGYGGGHGK

XP_022921886.1 glycine-rich cell wall structural protein 2-like [Cucurbita moschata]1.7e-3190.4Show/hide
Query:  MSCFKSLVLAALLVSSLFVLSHSRVARKDLGIDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSGSGSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
        M  +KSL+LAA+LVSSL V+S SRVARKDLG+DLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGS S SSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
Subjt:  MSCFKSLVLAALLVSSLFVLSHSRVARKDLGIDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSGSGSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG

Query:  SGGREGGGSGYGGGYGSGYGGGHGK
        SGGR GGGSGYGGGYGSGYGGGHGK
Subjt:  SGGREGGGSGYGGGYGSGYGGGHGK

XP_022988598.1 glycine-rich cell wall structural protein 2-like [Cucurbita maxima]8.4e-3190.4Show/hide
Query:  MSCFKSLVLAALLVSSLFVLSHSRVARKDLGIDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSGSGSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
        M   KSLVLAA+LVSSL V+S SRVARKDLG+DLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGS S SSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
Subjt:  MSCFKSLVLAALLVSSLFVLSHSRVARKDLGIDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSGSGSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG

Query:  SGGREGGGSGYGGGYGSGYGGGHGK
        SGG  GGGSGYGGGYGSGYGGGHGK
Subjt:  SGGREGGGSGYGGGYGSGYGGGHGK

XP_023515822.1 counting factor 45-1-like [Cucurbita pepo subsp. pepo]2.7e-2988.8Show/hide
Query:  MSCFKSLVLAALLVSSLFVLSHSRVARKDLGIDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSGSGSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
        M  +KSL+LAA+LVSSL V+S SRVARKDLG+DLGGVGVGIGAGIGIGLG  GSGSGSGSGSGS S SSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
Subjt:  MSCFKSLVLAALLVSSLFVLSHSRVARKDLGIDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSGSGSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG

Query:  SGGREGGGSGYGGGYGSGYGGGHGK
        SGGR GGGSGYGGGYGSGYGGGHGK
Subjt:  SGGREGGGSGYGGGYGSGYGGGHGK

XP_038879831.1 glycine-rich cell wall structural protein 2 [Benincasa hispida]1.7e-3191.34Show/hide
Query:  MSCFKSLVLAALLVSSLFVLSHSRVARKDLGIDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSGSG--SSSSSSSSSSSSGSGSDSGSEAGSYAGSRAG
        M   KSLVLAALLVSSLFV+SHSRVARKDLG+DLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSGSG  SSSSSSSSSSSSGSGSDSGSEAGSYAGSRAG
Subjt:  MSCFKSLVLAALLVSSLFVLSHSRVARKDLGIDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSGSG--SSSSSSSSSSSSGSGSDSGSEAGSYAGSRAG

Query:  SGSGGREGGGSGYGGGYGSGYGGGHGK
        SGSGG  GGGSGYGGGYG GYGGGH K
Subjt:  SGSGGREGGGSGYGGGYGSGYGGGHGK

TrEMBL top hitse value%identityAlignment
A0A0A0LWP0 Uncharacterized protein3.8e-2987.5Show/hide
Query:  MSCFKSLVLAALLVSSLFVL-SHSRVARKDLGIDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSG--SGSSSSSSSSSSSSGSGSDSGSEAGSYAGSRA
        M   KSLVLAALLVSSLFV+ S SRVARKDLG+DLGGVG+G+GAG+GIGLGGSGSG+GSGSGSGSG  S SSSSSSSSSSSSGSGSDSGSEAGSYAGSRA
Subjt:  MSCFKSLVLAALLVSSLFVL-SHSRVARKDLGIDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSG--SGSSSSSSSSSSSSGSGSDSGSEAGSYAGSRA

Query:  GSGSGGREGGGSGYGGGYGSGYGGGHGK
        GSGSGGR G GSGYGGGYGSGYGGGHGK
Subjt:  GSGSGGREGGGSGYGGGYGSGYGGGHGK

A0A1S4DUX4 glycine-rich cell wall structural protein 2-like1.5e-3088.19Show/hide
Query:  MSCFKSLVLAALLVSSLFVLSHSRVARKDLGIDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSGSGSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
        M   KSLVLAALLVSS FV+S SRVARKDLG+DLGGVG+G+G GIGIGLGGSGSGSGSGSGSGSGS SSSSSSSSSSSSGSGS+SGSEAGSYAGSRAGSG
Subjt:  MSCFKSLVLAALLVSSLFVLSHSRVARKDLGIDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSGSGSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG

Query:  SGGR--EGGGSGYGGGYGSGYGGGHGK
        S GR  EGGGSGYGGGYGSGYGGGHGK
Subjt:  SGGR--EGGGSGYGGGYGSGYGGGHGK

A0A5A7T0K2 Glycine-rich cell wall structural protein 2-like1.5e-3088.19Show/hide
Query:  MSCFKSLVLAALLVSSLFVLSHSRVARKDLGIDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSGSGSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
        M   KSLVLAALLVSS FV+S SRVARKDLG+DLGGVG+G+G GIGIGLGGSGSGSGSGSGSGSGS SSSSSSSSSSSSGSGS+SGSEAGSYAGSRAGSG
Subjt:  MSCFKSLVLAALLVSSLFVLSHSRVARKDLGIDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSGSGSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG

Query:  SGGR--EGGGSGYGGGYGSGYGGGHGK
        S GR  EGGGSGYGGGYGSGYGGGHGK
Subjt:  SGGR--EGGGSGYGGGYGSGYGGGHGK

A0A6J1E2L6 glycine-rich cell wall structural protein 2-like8.2e-3290.4Show/hide
Query:  MSCFKSLVLAALLVSSLFVLSHSRVARKDLGIDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSGSGSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
        M  +KSL+LAA+LVSSL V+S SRVARKDLG+DLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGS S SSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
Subjt:  MSCFKSLVLAALLVSSLFVLSHSRVARKDLGIDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSGSGSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG

Query:  SGGREGGGSGYGGGYGSGYGGGHGK
        SGGR GGGSGYGGGYGSGYGGGHGK
Subjt:  SGGREGGGSGYGGGYGSGYGGGHGK

A0A6J1JMR8 glycine-rich cell wall structural protein 2-like4.1e-3190.4Show/hide
Query:  MSCFKSLVLAALLVSSLFVLSHSRVARKDLGIDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSGSGSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
        M   KSLVLAA+LVSSL V+S SRVARKDLG+DLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGS S SSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG
Subjt:  MSCFKSLVLAALLVSSLFVLSHSRVARKDLGIDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSGSGSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSG

Query:  SGGREGGGSGYGGGYGSGYGGGHGK
        SGG  GGGSGYGGGYGSGYGGGHGK
Subjt:  SGGREGGGSGYGGGYGSGYGGGHGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G30450.1 glycine-rich protein1.3e-1671.43Show/hide
Query:  VLAALLVSSLFVLSHSRVARKDLGIDLGGVGVGIGAGIGIGLG---GSGSGSGSGSGSGSGSGSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSGSG
        +L  +++SSL +L+ SR+ARKDLGIDLGG+G+G+G G+GIGLG   GSG+G+GSGSGSGS S SSSSSSSSSSSSGSG  +GS AGS+AGSRAGSGSG
Subjt:  VLAALLVSSLFVLSHSRVARKDLGIDLGGVGVGIGAGIGIGLG---GSGSGSGSGSGSGSGSGSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSGSG

AT4G30460.1 glycine-rich protein3.0e-1868.85Show/hide
Query:  SLVLAALLVSSLFVLSHSRVARKDLGIDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSG---SGSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSGSG
        SL+L  L++++  ++S SRVARKDLG+DLGG+G GIG GIGIG GGSGSG+G+GSGSG G   S SSSSSSSSSSS G G D+GSEAGSYAGS AGSGSG
Subjt:  SLVLAALLVSSLFVLSHSRVARKDLGIDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSG---SGSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSGSG

Query:  GREGGGSGYGGGYGSGYGGGHG
        GR G G G G G G G+GGG G
Subjt:  GREGGGSGYGGGYGSGYGGGHG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTGTTTCAAATCCTTGGTTCTTGCTGCTCTGCTTGTTTCGTCTCTTTTTGTTTTATCCCACAGCCGAGTTGCCAGGAAAGACTTGGGCATTGACTTGGGTGGGGT
AGGCGTTGGGATTGGAGCTGGAATTGGCATTGGACTCGGTGGAAGTGGTTCGGGCTCGGGTTCTGGTTCTGGCTCTGGCTCTGGCTCTGGATCAAGTTCGAGTTCTAGCT
CTAGCTCTTCTTCTTCTGGGTCGGGTTCTGACTCTGGATCTGAAGCAGGCTCGTATGCTGGGTCTCGAGCAGGTTCTGGATCGGGTGGTCGAGAAGGTGGAGGGTCGGGC
TATGGTGGAGGATATGGATCGGGTTATGGAGGAGGACATGGAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTGTTTCAAATCCTTGGTTCTTGCTGCTCTGCTTGTTTCGTCTCTTTTTGTTTTATCCCACAGCCGAGTTGCCAGGAAAGACTTGGGCATTGACTTGGGTGGGGT
AGGCGTTGGGATTGGAGCTGGAATTGGCATTGGACTCGGTGGAAGTGGTTCGGGCTCGGGTTCTGGTTCTGGCTCTGGCTCTGGCTCTGGATCAAGTTCGAGTTCTAGCT
CTAGCTCTTCTTCTTCTGGGTCGGGTTCTGACTCTGGATCTGAAGCAGGCTCGTATGCTGGGTCTCGAGCAGGTTCTGGATCGGGTGGTCGAGAAGGTGGAGGGTCGGGC
TATGGTGGAGGATATGGATCGGGTTATGGAGGAGGACATGGAAAATGA
Protein sequenceShow/hide protein sequence
MSCFKSLVLAALLVSSLFVLSHSRVARKDLGIDLGGVGVGIGAGIGIGLGGSGSGSGSGSGSGSGSGSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSGSGGREGGGSG
YGGGYGSGYGGGHGK