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Lsi06G011040 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G011040
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionGlutamate receptor
Genome locationchr06:21288449..21291980
RNA-Seq ExpressionLsi06G011040
SyntenyLsi06G011040
Gene Ontology termsGO:0034220 - ion transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0015276 - ligand-gated ion channel activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063998.1 glutamate receptor 2.2-like [Cucumis melo var. makuwa]1.1e-0475.61Show/hide
Query:  EHSHLDEKDKEMDDVSKSSEVVSADSDHGCHDGSACLPKYV
        E SH D KDKEMDD+SKSSE VSAD+DHGCHDGSA   K+V
Subjt:  EHSHLDEKDKEMDDVSKSSEVVSADSDHGCHDGSACLPKYV
TYK09473.1 glutamate receptor 2.2-like [Cucumis melo var. makuwa]1.1e-0475.61Show/hide
Query:  EHSHLDEKDKEMDDVSKSSEVVSADSDHGCHDGSACLPKYV
        E SH D KDKEMDD+SKSSE VSAD+DHGCHDGSA   K+V
Subjt:  EHSHLDEKDKEMDDVSKSSEVVSADSDHGCHDGSACLPKYV
XP_038880117.1 glutamate receptor 2.2-like isoform X1 [Benincasa hispida]9.1e-0775.56Show/hide
Query:  HSHLDEKDKEMDDVSKSSEVVSADSDHGCHDGSACLPKYV-ETTS
        HSH D KDKEMDD+SKSSE VSAD+DHGCHD SA   K+V ETTS
Subjt:  HSHLDEKDKEMDDVSKSSEVVSADSDHGCHDGSACLPKYV-ETTS
XP_038880118.1 glutamate receptor 2.2-like isoform X2 [Benincasa hispida]9.1e-0775.56Show/hide
Query:  HSHLDEKDKEMDDVSKSSEVVSADSDHGCHDGSACLPKYV-ETTS
        HSH D KDKEMDD+SKSSE VSAD+DHGCHD SA   K+V ETTS
Subjt:  HSHLDEKDKEMDDVSKSSEVVSADSDHGCHDGSACLPKYV-ETTS
XP_038880119.1 glutamate receptor 2.2-like isoform X3 [Benincasa hispida]9.1e-0775.56Show/hide
Query:  HSHLDEKDKEMDDVSKSSEVVSADSDHGCHDGSACLPKYV-ETTS
        HSH D KDKEMDD+SKSSE VSAD+DHGCHD SA   K+V ETTS
Subjt:  HSHLDEKDKEMDDVSKSSEVVSADSDHGCHDGSACLPKYV-ETTS
TrEMBL top hitse value%identityAlignment
A0A1S3BWV8 Glutamate receptor5.4e-0575.61Show/hide
Query:  EHSHLDEKDKEMDDVSKSSEVVSADSDHGCHDGSACLPKYV
        E SH D KDKEMDD+SKSSE VSAD+DHGCHDGSA   K+V
Subjt:  EHSHLDEKDKEMDDVSKSSEVVSADSDHGCHDGSACLPKYV
A0A5A7V8Q7 Glutamate receptor5.4e-0575.61Show/hide
Query:  EHSHLDEKDKEMDDVSKSSEVVSADSDHGCHDGSACLPKYV
        E SH D KDKEMDD+SKSSE VSAD+DHGCHDGSA   K+V
Subjt:  EHSHLDEKDKEMDDVSKSSEVVSADSDHGCHDGSACLPKYV
A0A5D3CC94 Glutamate receptor5.4e-0575.61Show/hide
Query:  EHSHLDEKDKEMDDVSKSSEVVSADSDHGCHDGSACLPKYV
        E SH D KDKEMDD+SKSSE VSAD+DHGCHDGSA   K+V
Subjt:  EHSHLDEKDKEMDDVSKSSEVVSADSDHGCHDGSACLPKYV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTCCAATTTAGCTAATTGTGCAACTAATAGGGTGGAGCAGTGGTTTCTACACAATTGCAAAATTAGAAAAGAGATATTATTTTGCAAAAATGAAGATGAGCATTC
ACATCTTGATGAGAAGGACAAGGAAATGGACGACGTGTCGAAATCGTCAGAAGTTGTTTCAGCTGATTCAGATCATGGTTGTCACGATGGAAGTGCTTGTCTCCCAAAAT
ATGTTGAGACCACTAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTCCAATTTAGCTAATTGTGCAACTAATAGGGTGGAGCAGTGGTTTCTACACAATTGCAAAATTAGAAAAGAGATATTATTTTGCAAAAATGAAGATGAGCATTC
ACATCTTGATGAGAAGGACAAGGAAATGGACGACGTGTCGAAATCGTCAGAAGTTGTTTCAGCTGATTCAGATCATGGTTGTCACGATGGAAGTGCTTGTCTCCCAAAAT
ATGTTGAGACCACTAGCTAA
Protein sequenceShow/hide protein sequence
MKSNLANCATNRVEQWFLHNCKIRKEILFCKNEDEHSHLDEKDKEMDDVSKSSEVVSADSDHGCHDGSACLPKYVETTS