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Lsi06G011390 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G011390
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionEthylene-responsive transcription factor ERF-like
Genome locationchr06:21664451..21664764
RNA-Seq ExpressionLsi06G011390
SyntenyLsi06G011390
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER37875.1 integrase-type DNA-binding superfamily protein [Striga asiatica]7.2e-1259.7Show/hide
Query:  SYRGVRQRRELGPWVAEIRDPTPKKQIWLGSFKTAEMSAKAYDAYAYHLKGSQARLKLPGKYRQPPQ
        +Y GVR +R+ G WV+EIR+P  K +IWLGSF TAEM+A AYDA A+HLKGS+ARL  PG   + P+
Subjt:  SYRGVRQRRELGPWVAEIRDPTPKKQIWLGSFKTAEMSAKAYDAYAYHLKGSQARLKLPGKYRQPPQ

RYR44838.1 hypothetical protein Ahy_A08g041116 isoform D [Arachis hypogaea]7.2e-1254.05Show/hide
Query:  GVRMMSYRGVRQRRELGPWVAEIRDPTPKKQIWLGSFKTAEMSAKAYDAYAYHLKGSQARLKLPGKYRQPPQIP
        G R   YRGVR+RR  G WV+EIR+P  K +IWLGSF + EM+AKAYD  AY LKG +A+L  P +  + P +P
Subjt:  GVRMMSYRGVRQRRELGPWVAEIRDPTPKKQIWLGSFKTAEMSAKAYDAYAYHLKGSQARLKLPGKYRQPPQIP

RYR44839.1 hypothetical protein Ahy_A08g041116 isoform C [Arachis hypogaea]7.2e-1254.05Show/hide
Query:  GVRMMSYRGVRQRRELGPWVAEIRDPTPKKQIWLGSFKTAEMSAKAYDAYAYHLKGSQARLKLPGKYRQPPQIP
        G R   YRGVR+RR  G WV+EIR+P  K +IWLGSF + EM+AKAYD  AY LKG +A+L  P +  + P +P
Subjt:  GVRMMSYRGVRQRRELGPWVAEIRDPTPKKQIWLGSFKTAEMSAKAYDAYAYHLKGSQARLKLPGKYRQPPQIP

RYR44840.1 hypothetical protein Ahy_A08g041116 isoform A [Arachis hypogaea]7.2e-1254.05Show/hide
Query:  GVRMMSYRGVRQRRELGPWVAEIRDPTPKKQIWLGSFKTAEMSAKAYDAYAYHLKGSQARLKLPGKYRQPPQIP
        G R   YRGVR+RR  G WV+EIR+P  K +IWLGSF + EM+AKAYD  AY LKG +A+L  P +  + P +P
Subjt:  GVRMMSYRGVRQRRELGPWVAEIRDPTPKKQIWLGSFKTAEMSAKAYDAYAYHLKGSQARLKLPGKYRQPPQIP

XP_022925517.1 ethylene-responsive transcription factor ERF021-like [Cucurbita moschata]4.2e-1258.82Show/hide
Query:  MGIVGVRMMSYRGVRQRRELGPWVAEIRDPTPKKQIWLGSFKTAEMSAKAYDAYAYHLKGSQARLKLP
        MG  G    SYRGVR +R+ G WV+EIR+P  K +IWLGSF+T EM+A AYDA AYH +G  ARL  P
Subjt:  MGIVGVRMMSYRGVRQRRELGPWVAEIRDPTPKKQIWLGSFKTAEMSAKAYDAYAYHLKGSQARLKLP

TrEMBL top hitse value%identityAlignment
A0A445C1P1 AP2/ERF domain-containing protein3.5e-1254.05Show/hide
Query:  GVRMMSYRGVRQRRELGPWVAEIRDPTPKKQIWLGSFKTAEMSAKAYDAYAYHLKGSQARLKLPGKYRQPPQIP
        G R   YRGVR+RR  G WV+EIR+P  K +IWLGSF + EM+AKAYD  AY LKG +A+L  P +  + P +P
Subjt:  GVRMMSYRGVRQRRELGPWVAEIRDPTPKKQIWLGSFKTAEMSAKAYDAYAYHLKGSQARLKLPGKYRQPPQIP

A0A445C1P9 AP2/ERF domain-containing protein3.5e-1254.05Show/hide
Query:  GVRMMSYRGVRQRRELGPWVAEIRDPTPKKQIWLGSFKTAEMSAKAYDAYAYHLKGSQARLKLPGKYRQPPQIP
        G R   YRGVR+RR  G WV+EIR+P  K +IWLGSF + EM+AKAYD  AY LKG +A+L  P +  + P +P
Subjt:  GVRMMSYRGVRQRRELGPWVAEIRDPTPKKQIWLGSFKTAEMSAKAYDAYAYHLKGSQARLKLPGKYRQPPQIP

A0A445C1Q4 AP2/ERF domain-containing protein3.5e-1254.05Show/hide
Query:  GVRMMSYRGVRQRRELGPWVAEIRDPTPKKQIWLGSFKTAEMSAKAYDAYAYHLKGSQARLKLPGKYRQPPQIP
        G R   YRGVR+RR  G WV+EIR+P  K +IWLGSF + EM+AKAYD  AY LKG +A+L  P +  + P +P
Subjt:  GVRMMSYRGVRQRRELGPWVAEIRDPTPKKQIWLGSFKTAEMSAKAYDAYAYHLKGSQARLKLPGKYRQPPQIP

A0A5A7PYC5 Integrase-type DNA-binding superfamily protein3.5e-1259.7Show/hide
Query:  SYRGVRQRRELGPWVAEIRDPTPKKQIWLGSFKTAEMSAKAYDAYAYHLKGSQARLKLPGKYRQPPQ
        +Y GVR +R+ G WV+EIR+P  K +IWLGSF TAEM+A AYDA A+HLKGS+ARL  PG   + P+
Subjt:  SYRGVRQRRELGPWVAEIRDPTPKKQIWLGSFKTAEMSAKAYDAYAYHLKGSQARLKLPGKYRQPPQ

A0A6J1EBX2 ethylene-responsive transcription factor ERF021-like2.0e-1258.82Show/hide
Query:  MGIVGVRMMSYRGVRQRRELGPWVAEIRDPTPKKQIWLGSFKTAEMSAKAYDAYAYHLKGSQARLKLP
        MG  G    SYRGVR +R+ G WV+EIR+P  K +IWLGSF+T EM+A AYDA AYH +G  ARL  P
Subjt:  MGIVGVRMMSYRGVRQRRELGPWVAEIRDPTPKKQIWLGSFKTAEMSAKAYDAYAYHLKGSQARLKLP

SwissProt top hitse value%identityAlignment
Q1ECI2 Ethylene-responsive transcription factor ERF0239.8e-1253.03Show/hide
Query:  YRGVRQRRELGPWVAEIRDPTPKKQIWLGSFKTAEMSAKAYDAYAYHLKGSQARLKLPGKYRQPPQ
        Y GVR+RR  G WV+EIR+P  K +IWLGSF   EM+AKAYD  A+ LKG +A+L  P +    P+
Subjt:  YRGVRQRRELGPWVAEIRDPTPKKQIWLGSFKTAEMSAKAYDAYAYHLKGSQARLKLPGKYRQPPQ

Q9C9I2 Ethylene-responsive transcription factor ERF0215.2e-1357.63Show/hide
Query:  SYRGVRQRRELGPWVAEIRDPTPKKQIWLGSFKTAEMSAKAYDAYAYHLKGSQARLKLP
        +YRGVR +R+ G WV+EIR+P  K +IWLGSF+T EM+A AYD  A+H +G +ARL  P
Subjt:  SYRGVRQRRELGPWVAEIRDPTPKKQIWLGSFKTAEMSAKAYDAYAYHLKGSQARLKLP

Q9LQ28 Ethylene-responsive transcription factor ERF0222.3e-1357.14Show/hide
Query:  VRMMSYRGVRQRRELGPWVAEIRDPTPKKQIWLGSFKTAEMSAKAYDAYAYHLKGSQARLKLP
        V  +SYRG+R RR+ G WV+EIR+P  K +IWLGS++TAEM+A AYDA A HL+G    L  P
Subjt:  VRMMSYRGVRQRRELGPWVAEIRDPTPKKQIWLGSFKTAEMSAKAYDAYAYHLKGSQARLKLP

Q9SJR0 Ethylene-responsive transcription factor ERF0241.2e-1252.11Show/hide
Query:  GVRMMSYRGVRQRRELGPWVAEIRDPTPKKQIWLGSFKTAEMSAKAYDAYAYHLKGSQARLKLPGKYRQPP
        G R   YRGVRQR+    WV+EIR+P    +IWLG+F T EM+A AYD  A  LKGSQA L  P      P
Subjt:  GVRMMSYRGVRQRRELGPWVAEIRDPTPKKQIWLGSFKTAEMSAKAYDAYAYHLKGSQARLKLPGKYRQPP

Q9SSA8 Ethylene-responsive transcription factor RAP2-127.5e-1254.84Show/hide
Query:  RMMSYRGVRQRRELGPWVAEIRDPTPKKQIWLGSFKTAEMSAKAYDAYAYHLKGSQARLKLP
        R   YRG+RQ R  G W AEIRDP    +IWLG+FKTAE +A+AYDA A  ++GS+A++  P
Subjt:  RMMSYRGVRQRRELGPWVAEIRDPTPKKQIWLGSFKTAEMSAKAYDAYAYHLKGSQARLKLP

Arabidopsis top hitse value%identityAlignment
AT1G33760.1 Integrase-type DNA-binding superfamily protein1.7e-1457.14Show/hide
Query:  VRMMSYRGVRQRRELGPWVAEIRDPTPKKQIWLGSFKTAEMSAKAYDAYAYHLKGSQARLKLP
        V  +SYRG+R RR+ G WV+EIR+P  K +IWLGS++TAEM+A AYDA A HL+G    L  P
Subjt:  VRMMSYRGVRQRRELGPWVAEIRDPTPKKQIWLGSFKTAEMSAKAYDAYAYHLKGSQARLKLP

AT1G53910.1 related to AP2 125.3e-1354.84Show/hide
Query:  RMMSYRGVRQRRELGPWVAEIRDPTPKKQIWLGSFKTAEMSAKAYDAYAYHLKGSQARLKLP
        R   YRG+RQ R  G W AEIRDP    +IWLG+FKTAE +A+AYDA A  ++GS+A++  P
Subjt:  RMMSYRGVRQRRELGPWVAEIRDPTPKKQIWLGSFKTAEMSAKAYDAYAYHLKGSQARLKLP

AT1G53910.2 related to AP2 125.3e-1354.84Show/hide
Query:  RMMSYRGVRQRRELGPWVAEIRDPTPKKQIWLGSFKTAEMSAKAYDAYAYHLKGSQARLKLP
        R   YRG+RQ R  G W AEIRDP    +IWLG+FKTAE +A+AYDA A  ++GS+A++  P
Subjt:  RMMSYRGVRQRRELGPWVAEIRDPTPKKQIWLGSFKTAEMSAKAYDAYAYHLKGSQARLKLP

AT1G71450.1 Integrase-type DNA-binding superfamily protein3.7e-1457.63Show/hide
Query:  SYRGVRQRRELGPWVAEIRDPTPKKQIWLGSFKTAEMSAKAYDAYAYHLKGSQARLKLP
        +YRGVR +R+ G WV+EIR+P  K +IWLGSF+T EM+A AYD  A+H +G +ARL  P
Subjt:  SYRGVRQRRELGPWVAEIRDPTPKKQIWLGSFKTAEMSAKAYDAYAYHLKGSQARLKLP

AT2G36450.1 Integrase-type DNA-binding superfamily protein8.2e-1452.11Show/hide
Query:  GVRMMSYRGVRQRRELGPWVAEIRDPTPKKQIWLGSFKTAEMSAKAYDAYAYHLKGSQARLKLPGKYRQPP
        G R   YRGVRQR+    WV+EIR+P    +IWLG+F T EM+A AYD  A  LKGSQA L  P      P
Subjt:  GVRMMSYRGVRQRRELGPWVAEIRDPTPKKQIWLGSFKTAEMSAKAYDAYAYHLKGSQARLKLPGKYRQPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTATTGTTGGCGTTAGAATGATGAGTTATAGAGGCGTTCGGCAGAGGAGGGAGTTAGGACCATGGGTGGCGGAAATCCGCGACCCAACCCCGAAGAAGCAGATTTG
GCTAGGCAGTTTCAAAACGGCGGAGATGTCGGCGAAGGCCTACGACGCCTACGCTTATCACCTCAAAGGTTCCCAGGCTCGGCTCAAACTTCCCGGAAAATATCGACAAC
CTCCCCAAATTCCCATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTATTGTTGGCGTTAGAATGATGAGTTATAGAGGCGTTCGGCAGAGGAGGGAGTTAGGACCATGGGTGGCGGAAATCCGCGACCCAACCCCGAAGAAGCAGATTTG
GCTAGGCAGTTTCAAAACGGCGGAGATGTCGGCGAAGGCCTACGACGCCTACGCTTATCACCTCAAAGGTTCCCAGGCTCGGCTCAAACTTCCCGGAAAATATCGACAAC
CTCCCCAAATTCCCATCTGA
Protein sequenceShow/hide protein sequence
MGIVGVRMMSYRGVRQRRELGPWVAEIRDPTPKKQIWLGSFKTAEMSAKAYDAYAYHLKGSQARLKLPGKYRQPPQIPI