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Lsi06G011410 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G011410
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr06:21684152..21684460
RNA-Seq ExpressionLsi06G011410
SyntenyLsi06G011410
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035100.1 hypothetical protein E6C27_scaffold57G001750 [Cucumis melo var. makuwa]1.9e-1259.8Show/hide
Query:  MAAIHRCLIPIALISLLLLSESI-TISSADASSFTGILRRNIREDKDSGSSLADKISIKRGVRSGVISGHSTRSSSSRVSSSSPFNVASVICFHIAFAFV
        MAAIHR L+P+ALISLLL SES+  ISS D          N R DK S +SLA KI  KRGVRSGV +G ST SSS+++SSS  FNV S+ICF+IAF F 
Subjt:  MAAIHRCLIPIALISLLLLSESI-TISSADASSFTGILRRNIREDKDSGSSLADKISIKRGVRSGVISGHSTRSSSSRVSSSSPFNVASVICFHIAFAFV

Query:  FF
         F
Subjt:  FF

KAG6587814.1 hypothetical protein SDJN03_16379, partial [Cucurbita argyrosperma subsp. sororia]2.8e-1663.3Show/hide
Query:  MAAIHRCLIPIALISLLLLSESITISSADA----SSFTGILRRNI-------REDKDSGSSLADKISIKRGVRSGVISGHSTRSSSSRVSSSSPFNVASV
        MA I R L PI LI LLLLSES  +SSAD      S TGIL RN+       R DKD+GSSLA+KISIKRG RS VI GHS+ SSSSRV    PFN+ASV
Subjt:  MAAIHRCLIPIALISLLLLSESITISSADA----SSFTGILRRNI-------REDKDSGSSLADKISIKRGVRSGVISGHSTRSSSSRVSSSSPFNVASV

Query:  ICFHIAFAF
        ICF  AFAF
Subjt:  ICFHIAFAF

KGN65176.1 hypothetical protein Csa_019975 [Cucumis sativus]2.5e-1767.33Show/hide
Query:  AAIHRCLIPIALISLLLLSESI-TISSADASSFTGILRRNIREDKDSGSSLADKISIKRGVRSGVISGHSTRSSSSRVSSSSPFNVASVICFHIAFAFVF
        AAIHR L+PIALISLLL SES+  ISS+D      I   N   DKDSG+SL +KISIKRGVRSGVI+G ST SSS+RVSSSS FNV SVICF+IAF    
Subjt:  AAIHRCLIPIALISLLLLSESI-TISSADASSFTGILRRNIREDKDSGSSLADKISIKRGVRSGVISGHSTRSSSSRVSSSSPFNVASVICFHIAFAFVF

Query:  F
        F
Subjt:  F

TrEMBL top hitse value%identityAlignment
A0A0A0LYV9 Uncharacterized protein1.2e-1767.33Show/hide
Query:  AAIHRCLIPIALISLLLLSESI-TISSADASSFTGILRRNIREDKDSGSSLADKISIKRGVRSGVISGHSTRSSSSRVSSSSPFNVASVICFHIAFAFVF
        AAIHR L+PIALISLLL SES+  ISS+D      I   N   DKDSG+SL +KISIKRGVRSGVI+G ST SSS+RVSSSS FNV SVICF+IAF    
Subjt:  AAIHRCLIPIALISLLLLSESI-TISSADASSFTGILRRNIREDKDSGSSLADKISIKRGVRSGVISGHSTRSSSSRVSSSSPFNVASVICFHIAFAFVF

Query:  F
        F
Subjt:  F

A0A5D3BCG4 Uncharacterized protein9.1e-1359.8Show/hide
Query:  MAAIHRCLIPIALISLLLLSESI-TISSADASSFTGILRRNIREDKDSGSSLADKISIKRGVRSGVISGHSTRSSSSRVSSSSPFNVASVICFHIAFAFV
        MAAIHR L+P+ALISLLL SES+  ISS D          N R DK S +SLA KI  KRGVRSGV +G ST SSS+++SSS  FNV S+ICF+IAF F 
Subjt:  MAAIHRCLIPIALISLLLLSESI-TISSADASSFTGILRRNIREDKDSGSSLADKISIKRGVRSGVISGHSTRSSSSRVSSSSPFNVASVICFHIAFAFV

Query:  FF
         F
Subjt:  FF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCAATTCACCGCTGCTTAATTCCGATTGCTCTAATTTCTCTTCTCTTGCTTTCTGAATCTATCACTATATCCTCTGCTGATGCGAGTTCTTTCACCGGAATACT
CCGCCGGAATATTCGAGAGGATAAGGATTCCGGCTCCTCTTTGGCCGACAAGATCAGTATCAAAAGAGGGGTTCGATCCGGCGTAATTTCAGGTCATTCCACTAGATCCT
CCTCCAGCCGAGTGTCGTCGTCGTCGCCCTTTAATGTTGCCTCTGTTATTTGTTTCCACATAGCCTTTGCGTTTGTGTTCTTCTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCAATTCACCGCTGCTTAATTCCGATTGCTCTAATTTCTCTTCTCTTGCTTTCTGAATCTATCACTATATCCTCTGCTGATGCGAGTTCTTTCACCGGAATACT
CCGCCGGAATATTCGAGAGGATAAGGATTCCGGCTCCTCTTTGGCCGACAAGATCAGTATCAAAAGAGGGGTTCGATCCGGCGTAATTTCAGGTCATTCCACTAGATCCT
CCTCCAGCCGAGTGTCGTCGTCGTCGCCCTTTAATGTTGCCTCTGTTATTTGTTTCCACATAGCCTTTGCGTTTGTGTTCTTCTTCTGA
Protein sequenceShow/hide protein sequence
MAAIHRCLIPIALISLLLLSESITISSADASSFTGILRRNIREDKDSGSSLADKISIKRGVRSGVISGHSTRSSSSRVSSSSPFNVASVICFHIAFAFVFFF