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Lsi06G011430 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G011430
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr06:21691259..21694034
RNA-Seq ExpressionLsi06G011430
SyntenyLsi06G011430
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035098.1 uncharacterized protein E6C27_scaffold57G001730 [Cucumis melo var. makuwa]4.7e-2863.16Show/hide
Query:  MTKGLVILLLFSLISLYLLPFCLSETNFITKADDHYKQLKQGRPRK-------------------------VYGGANDIHHGHSKNDANRLQIKSTSSLL
        M KGL+IL LFS++ LYLLPFCL ETNF TKADDH KQLKQGRPRK                         VYGGANDIHHG SKNDAN L+IKS SSL+
Subjt:  MTKGLVILLLFSLISLYLLPFCLSETNFITKADDHYKQLKQGRPRK-------------------------VYGGANDIHHGHSKNDANRLQIKSTSSLL

Query:  WKVSFGFFGFCLLL
        WKVSFGF GFCL++
Subjt:  WKVSFGFFGFCLLL

KGN65174.1 hypothetical protein Csa_019558 [Cucumis sativus]1.6e-2864.86Show/hide
Query:  MTKGLVILLLFSLISLYLLPFCLSETNFITKADDHYKQLKQGRPRK----------------------VYGGANDIHHGHSKNDANRLQIKSTSSLLWKV
        M KGL++L LFS+I LYLLPFCL ETNF TKADDH KQLKQGRPRK                      VYGGANDIHHGHSKNDAN L IKS SSL+WKV
Subjt:  MTKGLVILLLFSLISLYLLPFCLSETNFITKADDHYKQLKQGRPRK----------------------VYGGANDIHHGHSKNDANRLQIKSTSSLLWKV

Query:  SFGFFGFCLLL
        SFGF GFC+++
Subjt:  SFGFFGFCLLL

XP_022921746.1 uncharacterized protein LOC111429900 [Cucurbita moschata]8.7e-2259.09Show/hide
Query:  MTKGLVILLLFSLISLYLLPFCLSETNFITKADDHYKQLKQGRPRK---------------------VYGGANDIHHGHSKNDANRLQIKSTSSLLWKVS
        M KG  +LLL SL+ L LLPFCLSE +F  KA D YK LKQGRPRK                     VYGG NDIH GHSKNDAN L+IKSTSSLLW VS
Subjt:  MTKGLVILLLFSLISLYLLPFCLSETNFITKADDHYKQLKQGRPRK---------------------VYGGANDIHHGHSKNDANRLQIKSTSSLLWKVS

Query:  FGFFGFCLLL
         GFF  C+LL
Subjt:  FGFFGFCLLL

XP_022988599.1 uncharacterized protein LOC111485797 [Cucurbita maxima]1.1e-2159.09Show/hide
Query:  MTKGLVILLLFSLISLYLLPFCLSETNFITKADDHYKQLKQGRPRK---------------------VYGGANDIHHGHSKNDANRLQIKSTSSLLWKVS
        M KG  +LLL SL+ L LLPFCLSE  F  KA D YK LKQGRPRK                     VYGG NDIH GHSKNDAN L+IKSTSSLLW+VS
Subjt:  MTKGLVILLLFSLISLYLLPFCLSETNFITKADDHYKQLKQGRPRK---------------------VYGGANDIHHGHSKNDANRLQIKSTSSLLWKVS

Query:  FGFFGFCLLL
         GFF  C+LL
Subjt:  FGFFGFCLLL

XP_023516536.1 uncharacterized protein LOC111780387 [Cucurbita pepo subsp. pepo]1.9e-2159.09Show/hide
Query:  MTKGLVILLLFSLISLYLLPFCLSETNFITKADDHYKQLKQGRPRK---------------------VYGGANDIHHGHSKNDANRLQIKSTSSLLWKVS
        M KG  +LLL SL+ L LLPFCLSE  F  KA D YK LKQGRPRK                     VYGG NDIH GHSKNDAN L+IKSTSSLLW VS
Subjt:  MTKGLVILLLFSLISLYLLPFCLSETNFITKADDHYKQLKQGRPRK---------------------VYGGANDIHHGHSKNDANRLQIKSTSSLLWKVS

Query:  FGFFGFCLLL
         GFF  C+LL
Subjt:  FGFFGFCLLL

TrEMBL top hitse value%identityAlignment
A0A0A0LW17 Uncharacterized protein7.9e-2964.86Show/hide
Query:  MTKGLVILLLFSLISLYLLPFCLSETNFITKADDHYKQLKQGRPRK----------------------VYGGANDIHHGHSKNDANRLQIKSTSSLLWKV
        M KGL++L LFS+I LYLLPFCL ETNF TKADDH KQLKQGRPRK                      VYGGANDIHHGHSKNDAN L IKS SSL+WKV
Subjt:  MTKGLVILLLFSLISLYLLPFCLSETNFITKADDHYKQLKQGRPRK----------------------VYGGANDIHHGHSKNDANRLQIKSTSSLLWKV

Query:  SFGFFGFCLLL
        SFGF GFC+++
Subjt:  SFGFFGFCLLL

A0A5A7SWW6 Uncharacterized protein2.3e-2863.16Show/hide
Query:  MTKGLVILLLFSLISLYLLPFCLSETNFITKADDHYKQLKQGRPRK-------------------------VYGGANDIHHGHSKNDANRLQIKSTSSLL
        M KGL+IL LFS++ LYLLPFCL ETNF TKADDH KQLKQGRPRK                         VYGGANDIHHG SKNDAN L+IKS SSL+
Subjt:  MTKGLVILLLFSLISLYLLPFCLSETNFITKADDHYKQLKQGRPRK-------------------------VYGGANDIHHGHSKNDANRLQIKSTSSLL

Query:  WKVSFGFFGFCLLL
        WKVSFGF GFCL++
Subjt:  WKVSFGFFGFCLLL

A0A6J1C4Y5 uncharacterized protein LOC1110074322.9e-0745.63Show/hide
Query:  GLVILLLFSLISLYLLPFCLS-ETNFITKADDHYK-QLKQGRPRK--------------------------VYGGANDIHHGHSKNDANRLQIKSTSSLL
        GL+ILLL S+     LP C S ETNF  K +D YK QLKQGRP K                          VYGGA+D+  GHSKNDA  L+IKS  S  
Subjt:  GLVILLLFSLISLYLLPFCLS-ETNFITKADDHYK-QLKQGRPRK--------------------------VYGGANDIHHGHSKNDANRLQIKSTSSLL

Query:  WKV
        W+V
Subjt:  WKV

A0A6J1E284 uncharacterized protein LOC1114299004.2e-2259.09Show/hide
Query:  MTKGLVILLLFSLISLYLLPFCLSETNFITKADDHYKQLKQGRPRK---------------------VYGGANDIHHGHSKNDANRLQIKSTSSLLWKVS
        M KG  +LLL SL+ L LLPFCLSE +F  KA D YK LKQGRPRK                     VYGG NDIH GHSKNDAN L+IKSTSSLLW VS
Subjt:  MTKGLVILLLFSLISLYLLPFCLSETNFITKADDHYKQLKQGRPRK---------------------VYGGANDIHHGHSKNDANRLQIKSTSSLLWKVS

Query:  FGFFGFCLLL
         GFF  C+LL
Subjt:  FGFFGFCLLL

A0A6J1JM10 uncharacterized protein LOC1114857975.5e-2259.09Show/hide
Query:  MTKGLVILLLFSLISLYLLPFCLSETNFITKADDHYKQLKQGRPRK---------------------VYGGANDIHHGHSKNDANRLQIKSTSSLLWKVS
        M KG  +LLL SL+ L LLPFCLSE  F  KA D YK LKQGRPRK                     VYGG NDIH GHSKNDAN L+IKSTSSLLW+VS
Subjt:  MTKGLVILLLFSLISLYLLPFCLSETNFITKADDHYKQLKQGRPRK---------------------VYGGANDIHHGHSKNDANRLQIKSTSSLLWKVS

Query:  FGFFGFCLLL
         GFF  C+LL
Subjt:  FGFFGFCLLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAAAGGACTAGTCATTTTGCTCCTCTTCTCCCTTATTTCCCTATATCTCCTTCCATTTTGCCTATCTGAAACCAATTTCATCACCAAAGCTGATGATCACTACAA
GCAACTGAAGCAGGGGAGGCCTAGAAAAGTTTATGGCGGTGCGAACGACATTCATCATGGGCACTCGAAGAATGATGCTAACCGTTTACAGATCAAATCAACTTCTTCGT
TGCTGTGGAAAGTTTCATTTGGTTTCTTTGGTTTCTGTCTTCTTCTT
mRNA sequenceShow/hide mRNA sequence
AAAAAAAAAAACTCTGAATGAATGATGAGAATCTTTGTTTTAGTTTTGGCATGTCCTCCAAAGCCCCACAGGCAGTTTTTATGGTTATGAACGAATTGTATAAATTTGGA
CCAAAAAATTTCAAACCCTTCTAATATTAGCCTCTTCCTTTTTATGTTTCTCCTTTCTTCTTCCTTCAATGGATCCCCCATTCCCACAGAGCATCCCCATCCCCATCCTC
ATCCCCATCTCTATCCCCTGCAACTAAACCACAATCTTATCATATCACATCCATGGCCGATCTTAAACCTCTCCAAATTCTACTGCTAATGGCGCCTCTTCTTCTTGCCT
CTCAACTCGATTCCGTTTTCGCTCACACAGATACAGCCACTCCCAATCTTCCCCAAGAAACAACCAATGGAGGACCTCTCTCTTCCTCAGATCCTCATCTTCCTCCGCCT
CGCAACAACCAAACAGCCGACCAAAACCGTAGGAAAAAAATTATCGAAGAACTTGTCGCTAAACTCTCTCCAAAACGCTTCAGATCTCATCGCGTTTCAATTAGGAAACG
CCGAAAACGCCAACGCCAACGACGCGCTTGGCGACACGCTTCCAGTCATTCCTCCCAAGGTTATATTCTGATGGTTTCTTTGCCGAACATTTGCTTCGCGATTCTTTCGT
TGATCCTGCATAATCTGGTTTCTGTTAATTCACTTTGAAGATGAAAATGAAGATGAAACCTAGCGGTAATATTTTTCCTTTAGCATTGTCTGCAAAGCCTTTTGTTGATT
CAGTTTTGAGATGAGAGGATGGGGATCTGTTTGGTTTGGTCATGAATTTTGTTCTTCAATTTTTTTTATTTTATTTTTTTTTTTTGTTAAAGGGAAAAATCATAATAAAG
GGTGAATTTTAGGGGAAGGCTCCTTCATATTTTTGTTATCTCAAGGTTTCTTTAGCAGAGGGAAAAAAGAAATGGAATAGAATTTGGGCAACAGGAGGAGAGGAATTATA
TTCTTTGTCTTCTAAAGTGAATGATCTGATTTTACAAAAGAAGATTTTCCATCTCTTCTGCTTCAATTCAATACCCTTTTTTCCTTCTCCACTCTTCCTCTTCAAGAACC
TCATCTCTTTGGAATCATATTAAAAGCACACTTTTCTATTTCCTGTTCATACTTCAGTTTCAACAGGATTGAACTATCGATCTTTGAAATGAAAACCTGACAATTTATTG
TTCAGTTCTTTCAAAATAATATAGAATAATAAAATTTCAACAGGCACTTTCTGTCATGGATTTCTCAATCCATCTTCATTTTCTCTCCACATAAGTTTCCTTTAGGTTCT
GTCTACACACATTGTTTGTTTTACATCAATATTATGTGATGTTCTTTTCTTAATAGTTAATACATCAAAAGTCAATAGCTAGATATCTTTTTAAAATAAAAATATGCACT
ACGATTAACATAATGATATCTAATTCTTGGTGATGAGATAAGTTTTTTATTTTACAAGAAATTAGACAAATGCTATATTCTAGGAATATCATGTCAGTTATACTATATTC
CAAGAATTTAAGAATAATGCAATCCCTAAAACGAATAATCTATTCAAATTATATTCTAACTTAATTGGTATACTTAGATTAAAAATTCTAAATGATCATATATGACTCGT
TTACAAGTATCTTTACATTTATCATAATTTGGAGGAAGAAAAATAGAAGAAATTACAAAAGGGAGTCCATTTTAAGCCACAAATTCACTTTAGCTAAGAAGTAAGTTTTA
AATTCTTTTCTGAATTAAATAACATGATTTATGAGTATATATTCCAATTCATATATGTCTCTATAACCTATACACTTTATAGGGGGTACTGTTGTTTCTTTTTAGTGGTT
TAAAAACAGGCAGTCTCAACCCTCCATTTACTCATACAAGATTGAATTTGAAGATCAAAATCAACGCAAATGACGAAAGGACTAGTCATTTTGCTCCTCTTCTCCCTTAT
TTCCCTATATCTCCTTCCATTTTGCCTATCTGAAACCAATTTCATCACCAAAGCTGATGATCACTACAAGCAACTGAAGCAGGGGAGGCCTAGAAAAGTTTATGGCGGTG
CGAACGACATTCATCATGGGCACTCGAAGAATGATGCTAACCGTTTACAGATCAAATCAACTTCTTCGTTGCTGTGGAAAGTTTCATTTGGTTTCTTTGGTTTCTGTCTT
CTTCTT
Protein sequenceShow/hide protein sequence
MTKGLVILLLFSLISLYLLPFCLSETNFITKADDHYKQLKQGRPRKVYGGANDIHHGHSKNDANRLQIKSTSSLLWKVSFGFFGFCLLL