; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi06G011670 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G011670
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr06:21920749..21923459
RNA-Seq ExpressionLsi06G011670
SyntenyLsi06G011670
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653049.1 hypothetical protein Csa_020128 [Cucumis sativus]1.8e-1649.59Show/hide
Query:  MATISRFGCLKGLLFSSPRYGVSKPENFPIQVTDLFDKKIFLDFCSPVPFSKIITIFFSLVIYLSGLEYCFSQHLFDVGRQQPAYFSLHFRLTIITTTPI
        MATISRFGCLKGLLFSSPRYGVS PENFPI                                          QHLFDVGRQQ AY SLHFRLTI   TPI
Subjt:  MATISRFGCLKGLLFSSPRYGVSKPENFPIQVTDLFDKKIFLDFCSPVPFSKIITIFFSLVIYLSGLEYCFSQHLFDVGRQQPAYFSLHFRLTIITTTPI

Query:  VRLRGTFFSSVLLNEIWQAFISL
        VR RG        N I+  F SL
Subjt:  VRLRGTFFSSVLLNEIWQAFISL
KAG6587833.1 hypothetical protein SDJN03_16398, partial [Cucurbita argyrosperma subsp. sororia]8.8e-1652.88Show/hide
Query:  MATISRFGCLKGLLFSSPRYGVSKPENFPIQVTDLFDKKIFLDFCSPVPFSKIITIFFSLVIYLSGLEYCFSQHLFDVGRQQPAYFSLHFRLTIITTTPI
        MATISRFGCLK L FSSPRYG SKPENFPI                                          QHL DVGRQQPAYFSLHFR  IITTTP 
Subjt:  MATISRFGCLKGLLFSSPRYGVSKPENFPIQVTDLFDKKIFLDFCSPVPFSKIITIFFSLVIYLSGLEYCFSQHLFDVGRQQPAYFSLHFRLTIITTTPI

Query:  VRLR
        VRLR
Subjt:  VRLR
KAG7035673.1 AP2/ERF and B3 domain-containing transcription factor [Cucurbita argyrosperma subsp. argyrosperma]8.8e-1652.88Show/hide
Query:  MATISRFGCLKGLLFSSPRYGVSKPENFPIQVTDLFDKKIFLDFCSPVPFSKIITIFFSLVIYLSGLEYCFSQHLFDVGRQQPAYFSLHFRLTIITTTPI
        MATISRFGCLK L FSSPRYG SKPENFPI                                          QHL DVGRQQPAYFSLHFR  IITTTP 
Subjt:  MATISRFGCLKGLLFSSPRYGVSKPENFPIQVTDLFDKKIFLDFCSPVPFSKIITIFFSLVIYLSGLEYCFSQHLFDVGRQQPAYFSLHFRLTIITTTPI

Query:  VRLR
        VRLR
Subjt:  VRLR
TrEMBL top hitse value%identityAlignment
A0A0A0LW76 Uncharacterized protein4.6e-2642.73Show/hide
Query:  EMEGEREQKGRRVTEESEHTLQPN---MSIGYRSGPLPISFFFPTLMDKWNNNIGEVEAASSKFQRCHCSVQFRLHTLKSVNFVLVFTFLKRKISYRRGL
        EME +REQKGRRVTEESEHTLQPN   MSIGYRS  LP                                   R+ + K V                   
Subjt:  EMEGEREQKGRRVTEESEHTLQPN---MSIGYRSGPLPISFFFPTLMDKWNNNIGEVEAASSKFQRCHCSVQFRLHTLKSVNFVLVFTFLKRKISYRRGL

Query:  LLGEGCETEPTRVLNMATISRFGCLKGLLFSSPRYGVSKPENFPIQVTDLFDKKIFLDFCSPVPFSKIITIFFSLVIYLSGLEYCFSQHLFDVGRQQPAY
                  T+VLNMATISRFGCLKGLLFSSPRYGVS PENFPI                                          QHLFDVGRQQ AY
Subjt:  LLGEGCETEPTRVLNMATISRFGCLKGLLFSSPRYGVSKPENFPIQVTDLFDKKIFLDFCSPVPFSKIITIFFSLVIYLSGLEYCFSQHLFDVGRQQPAY

Query:  FSLHFRLTIITTTPIVRLRG
         SLHFRLTI   TPIVR RG
Subjt:  FSLHFRLTIITTTPIVRLRG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGGTGTAAGGAGATGGAGGGGGAGAGAGAGCAAAAGGGCAGGAGAGTGACAGAAGAGAGTGAGCACACGCTGCAGCCAAATATGTCTATCGGCTATCGCTCCGG
TCCTCTCCCTATTTCGTTCTTTTTTCCTACTTTGATGGACAAATGGAACAATAACATTGGTGAAGTTGAAGCGGCCTCTTCGAAGTTTCAGCGGTGCCACTGTAGTGTAC
AATTTCGCCTTCACACTCTTAAATCTGTCAATTTTGTTTTGGTATTTACTTTCCTAAAACGAAAAATTTCCTACCGTCGTGGGCTTCTACTTGGAGAAGGGTGTGAGACT
GAACCGACTCGAGTGCTGAATATGGCAACAATCTCTCGTTTTGGATGCCTGAAGGGCCTGCTATTTTCGAGTCCCAGATATGGAGTTTCCAAACCGGAAAATTTCCCCAT
TCAGGTCACTGATTTATTCGATAAGAAGATATTCCTGGATTTTTGTTCACCTGTTCCCTTTTCCAAAATCATCACCATCTTCTTCTCTTTGGTTATTTATTTAAGTGGGC
TTGAATATTGCTTTTCTCAGCACTTGTTTGACGTTGGGAGGCAACAACCTGCTTATTTTTCTCTTCACTTCAGATTAACTATCATCACTACCACCCCCATTGTCCGGTTA
AGAGGAACATTTTTTTCCTCAGTACTTTTGAATGAAATATGGCAGGCATTCATTTCTCTTGTTATCCAGCAATTTTTG
mRNA sequenceShow/hide mRNA sequence
ATGGGGAGGTGTAAGGAGATGGAGGGGGAGAGAGAGCAAAAGGGCAGGAGAGTGACAGAAGAGAGTGAGCACACGCTGCAGCCAAATATGTCTATCGGCTATCGCTCCGG
TCCTCTCCCTATTTCGTTCTTTTTTCCTACTTTGATGGACAAATGGAACAATAACATTGGTGAAGTTGAAGCGGCCTCTTCGAAGTTTCAGCGGTGCCACTGTAGTGTAC
AATTTCGCCTTCACACTCTTAAATCTGTCAATTTTGTTTTGGTATTTACTTTCCTAAAACGAAAAATTTCCTACCGTCGTGGGCTTCTACTTGGAGAAGGGTGTGAGACT
GAACCGACTCGAGTGCTGAATATGGCAACAATCTCTCGTTTTGGATGCCTGAAGGGCCTGCTATTTTCGAGTCCCAGATATGGAGTTTCCAAACCGGAAAATTTCCCCAT
TCAGGTCACTGATTTATTCGATAAGAAGATATTCCTGGATTTTTGTTCACCTGTTCCCTTTTCCAAAATCATCACCATCTTCTTCTCTTTGGTTATTTATTTAAGTGGGC
TTGAATATTGCTTTTCTCAGCACTTGTTTGACGTTGGGAGGCAACAACCTGCTTATTTTTCTCTTCACTTCAGATTAACTATCATCACTACCACCCCCATTGTCCGGTTA
AGAGGAACATTTTTTTCCTCAGTACTTTTGAATGAAATATGGCAGGCATTCATTTCTCTTGTTATCCAGCAATTTTTG
Protein sequenceShow/hide protein sequence
MGRCKEMEGEREQKGRRVTEESEHTLQPNMSIGYRSGPLPISFFFPTLMDKWNNNIGEVEAASSKFQRCHCSVQFRLHTLKSVNFVLVFTFLKRKISYRRGLLLGEGCET
EPTRVLNMATISRFGCLKGLLFSSPRYGVSKPENFPIQVTDLFDKKIFLDFCSPVPFSKIITIFFSLVIYLSGLEYCFSQHLFDVGRQQPAYFSLHFRLTIITTTPIVRL
RGTFFSSVLLNEIWQAFISLVIQQFL