; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi06G011880 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G011880
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionmyb-related transcription factor, partner of profilin-like
Genome locationchr06:22169427..22170830
RNA-Seq ExpressionLsi06G011880
SyntenyLsi06G011880
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058264.1 uncharacterized protein E6C27_scaffold274G005900 [Cucumis melo var. makuwa]7.9e-5895Show/hide
Query:  MPINSESTPPPLIGKIGPYTVFMTPPATPSPVSQPQPVFDSPKKVIQPPPVQPPPHQFDKSVSVAAVPNGNASVSGFFRNAVTKVQNAHSSLDDHLARWF
        MPINSESTPPPLIGKIGPYTVFMTPP TPSP SQPQPVF+SPKKVIQPPPVQPPPHQFDKSVS+AAVPNGNASVSGFFRNAV+KVQNAHS LDDHLARWF
Subjt:  MPINSESTPPPLIGKIGPYTVFMTPPATPSPVSQPQPVFDSPKKVIQPPPVQPPPHQFDKSVSVAAVPNGNASVSGFFRNAVTKVQNAHSSLDDHLARWF

Query:  GLNQSKYQWALDDYYESKGM
        GLNQSKYQWALDDYYESKGM
Subjt:  GLNQSKYQWALDDYYESKGM
TYK11817.1 wiskott-Aldrich syndrome protein family member 2 [Cucumis melo var. makuwa]2.1e-5895.83Show/hide
Query:  MPINSESTPPPLIGKIGPYTVFMTPPATPSPVSQPQPVFDSPKKVIQPPPVQPPPHQFDKSVSVAAVPNGNASVSGFFRNAVTKVQNAHSSLDDHLARWF
        MPINSESTPPPLIGKIGPYTVFMTPP TPSP SQPQPVF+SPKKVIQPPPVQPPPHQFDKSVS+AAVPNGNASVSGFFRNAV+KVQNAHSSLDDHLARWF
Subjt:  MPINSESTPPPLIGKIGPYTVFMTPPATPSPVSQPQPVFDSPKKVIQPPPVQPPPHQFDKSVSVAAVPNGNASVSGFFRNAVTKVQNAHSSLDDHLARWF

Query:  GLNQSKYQWALDDYYESKGM
        GLNQSKYQWALDDYYESKGM
Subjt:  GLNQSKYQWALDDYYESKGM
XP_004146326.1 uncharacterized protein LOC101221556 [Cucumis sativus]4.7e-5895Show/hide
Query:  MPINSESTPPPLIGKIGPYTVFMTPPATPSPVSQPQPVFDSPKKVIQPPPVQPPPHQFDKSVSVAAVPNGNASVSGFFRNAVTKVQNAHSSLDDHLARWF
        MPINSESTPPPLIGKIGPYTVFMTPP TPSP SQPQP+F+SPKKVIQPPPVQPPPHQFDKSVS+AAVPNGNASVSGFFRNAV+KVQNAHSSLDDHLARWF
Subjt:  MPINSESTPPPLIGKIGPYTVFMTPPATPSPVSQPQPVFDSPKKVIQPPPVQPPPHQFDKSVSVAAVPNGNASVSGFFRNAVTKVQNAHSSLDDHLARWF

Query:  GLNQSKYQWALDDYYESKGM
        GLNQSKYQWALDDYYESKGM
Subjt:  GLNQSKYQWALDDYYESKGM
XP_008453592.1 PREDICTED: uncharacterized protein LOC103494256 [Cucumis melo]7.9e-5895Show/hide
Query:  MPINSESTPPPLIGKIGPYTVFMTPPATPSPVSQPQPVFDSPKKVIQPPPVQPPPHQFDKSVSVAAVPNGNASVSGFFRNAVTKVQNAHSSLDDHLARWF
        MPINSESTPPPLIGKIGPYTVFMTPP TPSP SQPQPVF+SPKKVIQPPPVQPPPHQFDKSVS+AAVPNGNASVSGFFRNAV+KVQNAHS LDDHLARWF
Subjt:  MPINSESTPPPLIGKIGPYTVFMTPPATPSPVSQPQPVFDSPKKVIQPPPVQPPPHQFDKSVSVAAVPNGNASVSGFFRNAVTKVQNAHSSLDDHLARWF

Query:  GLNQSKYQWALDDYYESKGM
        GLNQSKYQWALDDYYESKGM
Subjt:  GLNQSKYQWALDDYYESKGM
XP_038878417.1 uncharacterized protein LOC120070657 [Benincasa hispida]1.2e-5896.67Show/hide
Query:  MPINSESTPPPLIGKIGPYTVFMTPPATPSPVSQPQPVFDSPKKVIQPPPVQPPPHQFDKSVSVAAVPNGNASVSGFFRNAVTKVQNAHSSLDDHLARWF
        MPINSESTPPPLIGKIGPYTVFMTPPATPSP SQPQPVF+SPKKVIQPPPVQPPPHQFDKSVSVAA PNGNASVSGFFRNAV+KVQNAHSSLDDHLARWF
Subjt:  MPINSESTPPPLIGKIGPYTVFMTPPATPSPVSQPQPVFDSPKKVIQPPPVQPPPHQFDKSVSVAAVPNGNASVSGFFRNAVTKVQNAHSSLDDHLARWF

Query:  GLNQSKYQWALDDYYESKGM
        GLNQSKYQWALDDYYESKGM
Subjt:  GLNQSKYQWALDDYYESKGM
TrEMBL top hitse value%identityAlignment
A0A0A0LUN3 Uncharacterized protein2.3e-5895Show/hide
Query:  MPINSESTPPPLIGKIGPYTVFMTPPATPSPVSQPQPVFDSPKKVIQPPPVQPPPHQFDKSVSVAAVPNGNASVSGFFRNAVTKVQNAHSSLDDHLARWF
        MPINSESTPPPLIGKIGPYTVFMTPP TPSP SQPQP+F+SPKKVIQPPPVQPPPHQFDKSVS+AAVPNGNASVSGFFRNAV+KVQNAHSSLDDHLARWF
Subjt:  MPINSESTPPPLIGKIGPYTVFMTPPATPSPVSQPQPVFDSPKKVIQPPPVQPPPHQFDKSVSVAAVPNGNASVSGFFRNAVTKVQNAHSSLDDHLARWF

Query:  GLNQSKYQWALDDYYESKGM
        GLNQSKYQWALDDYYESKGM
Subjt:  GLNQSKYQWALDDYYESKGM
A0A1S3BXF0 uncharacterized protein LOC1034942563.8e-5895Show/hide
Query:  MPINSESTPPPLIGKIGPYTVFMTPPATPSPVSQPQPVFDSPKKVIQPPPVQPPPHQFDKSVSVAAVPNGNASVSGFFRNAVTKVQNAHSSLDDHLARWF
        MPINSESTPPPLIGKIGPYTVFMTPP TPSP SQPQPVF+SPKKVIQPPPVQPPPHQFDKSVS+AAVPNGNASVSGFFRNAV+KVQNAHS LDDHLARWF
Subjt:  MPINSESTPPPLIGKIGPYTVFMTPPATPSPVSQPQPVFDSPKKVIQPPPVQPPPHQFDKSVSVAAVPNGNASVSGFFRNAVTKVQNAHSSLDDHLARWF

Query:  GLNQSKYQWALDDYYESKGM
        GLNQSKYQWALDDYYESKGM
Subjt:  GLNQSKYQWALDDYYESKGM
A0A5A7USX1 Uncharacterized protein3.8e-5895Show/hide
Query:  MPINSESTPPPLIGKIGPYTVFMTPPATPSPVSQPQPVFDSPKKVIQPPPVQPPPHQFDKSVSVAAVPNGNASVSGFFRNAVTKVQNAHSSLDDHLARWF
        MPINSESTPPPLIGKIGPYTVFMTPP TPSP SQPQPVF+SPKKVIQPPPVQPPPHQFDKSVS+AAVPNGNASVSGFFRNAV+KVQNAHS LDDHLARWF
Subjt:  MPINSESTPPPLIGKIGPYTVFMTPPATPSPVSQPQPVFDSPKKVIQPPPVQPPPHQFDKSVSVAAVPNGNASVSGFFRNAVTKVQNAHSSLDDHLARWF

Query:  GLNQSKYQWALDDYYESKGM
        GLNQSKYQWALDDYYESKGM
Subjt:  GLNQSKYQWALDDYYESKGM
A0A5D3CIQ6 Wiskott-Aldrich syndrome protein family member 21.0e-5895.83Show/hide
Query:  MPINSESTPPPLIGKIGPYTVFMTPPATPSPVSQPQPVFDSPKKVIQPPPVQPPPHQFDKSVSVAAVPNGNASVSGFFRNAVTKVQNAHSSLDDHLARWF
        MPINSESTPPPLIGKIGPYTVFMTPP TPSP SQPQPVF+SPKKVIQPPPVQPPPHQFDKSVS+AAVPNGNASVSGFFRNAV+KVQNAHSSLDDHLARWF
Subjt:  MPINSESTPPPLIGKIGPYTVFMTPPATPSPVSQPQPVFDSPKKVIQPPPVQPPPHQFDKSVSVAAVPNGNASVSGFFRNAVTKVQNAHSSLDDHLARWF

Query:  GLNQSKYQWALDDYYESKGM
        GLNQSKYQWALDDYYESKGM
Subjt:  GLNQSKYQWALDDYYESKGM
A0A6J1KZL1 myb-related transcription factor, partner of profilin-like6.8e-5590.83Show/hide
Query:  MPINSESTPPPLIGKIGPYTVFMTPPATPSPVSQPQPVFDSPKKVIQPPPVQPPPHQFDKSVSVAAVPNGNASVSGFFRNAVTKVQNAHSSLDDHLARWF
        MPIN+ESTPPPLIGKIGPYTVFMTPP+TPSP S PQPVF+SPKKVIQPPPVQPPP QFDKSVSV  V NGNASV+GFFRNAV+KVQNAHSSLDDHLARWF
Subjt:  MPINSESTPPPLIGKIGPYTVFMTPPATPSPVSQPQPVFDSPKKVIQPPPVQPPPHQFDKSVSVAAVPNGNASVSGFFRNAVTKVQNAHSSLDDHLARWF

Query:  GLNQSKYQWALDDYYESKGM
        GLNQSKYQWALDDYYESKGM
Subjt:  GLNQSKYQWALDDYYESKGM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G18910.1 hydroxyproline-rich glycoprotein family protein6.3e-3769.75Show/hide
Query:  MPINSE-STPPPLIGKIGPYTVFMTPPATPSPVSQPQPVFDSPKKVIQPPPVQPPPHQFDKSVSVAAVPNGNASVSGFFRNAVTKVQNAHSSLDDHLARW
        MPIN + STPPP+IGKIGPYTVFMTPPATP P   P  V   P   +  PPV PPP QF KSV   A  + + SV GFF+NAVTKVQNAHSS+DDHL RW
Subjt:  MPINSE-STPPPLIGKIGPYTVFMTPPATPSPVSQPQPVFDSPKKVIQPPPVQPPPHQFDKSVSVAAVPNGNASVSGFFRNAVTKVQNAHSSLDDHLARW

Query:  FGLNQSKYQWALDDYYESK
        FGLNQSKYQWALD+YYESK
Subjt:  FGLNQSKYQWALDDYYESK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCATCAATAGCGAATCTACACCGCCTCCTTTGATCGGAAAAATTGGGCCCTATACCGTCTTCATGACCCCACCGGCCACTCCTTCACCGGTCTCTCAGCCTCAGCC
GGTCTTCGACTCTCCTAAGAAGGTCATTCAGCCGCCTCCGGTTCAGCCTCCGCCTCACCAGTTCGATAAGTCTGTTTCTGTTGCTGCTGTGCCTAATGGGAATGCATCCG
TCTCTGGATTCTTTAGAAATGCAGTCACTAAAGTGCAAAATGCACATTCAAGCTTGGATGACCATTTGGCACGCTGGTTCGGGTTAAATCAATCTAAATACCAGTGGGCA
CTAGATGATTACTACGAGAGCAAGGGAATGGTATGCGTCTAG
mRNA sequenceShow/hide mRNA sequence
AAGAAAGACAAAGATCCAACGAGTTTACACACTGAACTCGGGTTGCGTGCGATCCGTTCTCCAGTCTTTGAACACTGTGTGTTAGTGTTCATTCAGTGGCCAAAAAATCA
AAATACCCTCTCCAATTAAAGCTAAGGTAAAGCGAAATTCCTTCTCCAACTTTCTCTGCAACTCCAAAAAGCTCCTTCTTCTTTCTTCTTCATCTTCGCCCTCAAGATTT
TTCCCTTCTTCTTCCATTTCCGTTTCCATTTCCCTTTGCATTCACTCTTCTTCTTGCTTTCCCCCCCTTTTCTTTTCCAATCACCACAATGCCCATCAATAGCGAATCTA
CACCGCCTCCTTTGATCGGAAAAATTGGGCCCTATACCGTCTTCATGACCCCACCGGCCACTCCTTCACCGGTCTCTCAGCCTCAGCCGGTCTTCGACTCTCCTAAGAAG
GTCATTCAGCCGCCTCCGGTTCAGCCTCCGCCTCACCAGTTCGATAAGTCTGTTTCTGTTGCTGCTGTGCCTAATGGGAATGCATCCGTCTCTGGATTCTTTAGAAATGC
AGTCACTAAAGTGCAAAATGCACATTCAAGCTTGGATGACCATTTGGCACGCTGGTTCGGGTTAAATCAATCTAAATACCAGTGGGCACTAGATGATTACTACGAGAGCA
AGGGAATGGTATGCGTCTAG
Protein sequenceShow/hide protein sequence
MPINSESTPPPLIGKIGPYTVFMTPPATPSPVSQPQPVFDSPKKVIQPPPVQPPPHQFDKSVSVAAVPNGNASVSGFFRNAVTKVQNAHSSLDDHLARWFGLNQSKYQWA
LDDYYESKGMVCV