CuGenDBv2

Gene ID	Lsi06G011990
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Transmembrane protein
Genome location	chr06:22371930..22376247
RNA-Seq Expression	Lsi06G011990
Synteny	Lsi06G011990
Gene Ontology terms	GO:0036503 - ERAD pathway (biological process) GO:0005783 - endoplasmic reticulum (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

TYK28583.1 uncharacterized protein E5676_scaffold629G002330 [Cucumis melo var. makuwa]

1.6e-152

94.75

Show/hide

Query:  MAEGPEAIPSSSQSSSALKWQNDNLEQTQVPKISSFPTFPNGNVQMIPIMYPALVPGSAASENQNRGAGIYAVPSFPSMGGSIIGMTTNNLIPLTYSIPT
        MAEGPE+IPSSSQSSSALKWQ+DNLEQTQVPKISSFPTFPNGNVQMIPIMYPALVPGSA+SENQNRGAGIYAVPSFPSMGG IIGMTTNNLIPLTYSIPT
Subjt:  MAEGPEAIPSSSQSSSALKWQNDNLEQTQVPKISSFPTFPNGNVQMIPIMYPALVPGSAASENQNRGAGIYAVPSFPSMGGSIIGMTTNNLIPLTYSIPT

Query:  RSDTSNRTSPEGGAAVEENGRVEGQQQQQQQQPAPQRQVVVRRFQIAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLS
        RSDTSNRTSPEGG+AVEENGRVEGQQQ QQQQPAPQRQVVVRRFQIAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLS
Subjt:  RSDTSNRTSPEGGAAVEENGRVEGQQQQQQQQPAPQRQVVVRRFQIAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLS

Query:  QGMQRAAAPPHPPRPGVRAENAPVAPPAARPEAQNAAFAEGQPGVEVENQPANEGNRAVENENVAE--PGAGNGGLNWWGVVKEIQMIVFGFITSLLPGF
        QGMQRAAAPPHPPRPGVRAENAP+APPAAR E QNAAFAEGQPG EVENQPANE NR  ENENVAE   GAGNGGLNWWGVVKEIQMIVFGFITSLLPGF
Subjt:  QGMQRAAAPPHPPRPGVRAENAPVAPPAARPEAQNAAFAEGQPGVEVENQPANEGNRAVENENVAE--PGAGNGGLNWWGVVKEIQMIVFGFITSLLPGF

Query:  HNHMD
        HNHMD
Subjt:  HNHMD

XP_004146332.1 uncharacterized protein LOC101222970 isoform X1 [Cucumis sativus]

2.6e-150

93.44

Show/hide

Query:  MAEGPEAIPSSSQSSSALKWQNDNLEQTQVPKISSFPTFPNGNVQMIPIMYPALVPGSAASENQNRGAGIYAVPSFPSMGGSIIGMTTNNLIPLTYSIPT
        MAEGPE+IPSSSQSSSALKWQ+DNLEQ+QVPK+ SFPTFPNGNVQMIPIMYPALVPGSA+SENQNRGAGIYAVPSFPSMGG IIGMTTNNLIPLTYSIPT
Subjt:  MAEGPEAIPSSSQSSSALKWQNDNLEQTQVPKISSFPTFPNGNVQMIPIMYPALVPGSAASENQNRGAGIYAVPSFPSMGGSIIGMTTNNLIPLTYSIPT

Query:  RSDTSNRTSPEGGAAVEENGRVEGQQQQQQQQPAPQRQVVVRRFQIAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLS
        RSDTSNRTSPEGG+AVEENGRVEGQQQ QQQQP PQRQVVVRRFQIAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLS
Subjt:  RSDTSNRTSPEGGAAVEENGRVEGQQQQQQQQPAPQRQVVVRRFQIAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLS

Query:  QGMQRAAAPPHPPRPGVRAENAPVAPPAARPEAQNAAFAEGQPGVEVENQPANEGNRAVENENVAE--PGAGNGGLNWWGVVKEIQMIVFGFITSLLPGF
        QGMQRAAAPPHPPRPGVRA+NA VAPPAAR E QNAAFAEGQPG EVENQP NE NR VENENVAE  PGAGNGGLNWWGVVKEIQMIVFGFITSLLPGF
Subjt:  QGMQRAAAPPHPPRPGVRAENAPVAPPAARPEAQNAAFAEGQPGVEVENQPANEGNRAVENENVAE--PGAGNGGLNWWGVVKEIQMIVFGFITSLLPGF

Query:  HNHMD
        HNHMD
Subjt:  HNHMD

XP_008453568.1 PREDICTED: uncharacterized protein LOC103494241 isoform X1 [Cucumis melo]

2.3e-151

94.43

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Query:  MAEGPEAIPSSSQSSSALKWQNDNLEQTQVPKISSFPTFPNGNVQMIPIMYPALVPGSAASENQNRGAGIYAVPSFPSMGGSIIGMTTNNLIPLTYSIPT
        MAEGPE+IPSSSQSSSALKWQ+DNLEQTQVPKISSFPTFPNGNVQMIPIMYPALVPGSA+SENQNRGAGIYAVPSFPSMGG IIGMTTNNLIPLTYSIPT
Subjt:  MAEGPEAIPSSSQSSSALKWQNDNLEQTQVPKISSFPTFPNGNVQMIPIMYPALVPGSAASENQNRGAGIYAVPSFPSMGGSIIGMTTNNLIPLTYSIPT

Query:  RSDTSNRTSPEGGAAVEENGRVEGQQQQQQQQPAPQRQVVVRRFQIAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLS
        RSDTSNRTSPEGG+AVEENGRVEGQQQ QQQQ APQRQVVVRRFQIAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLS
Subjt:  RSDTSNRTSPEGGAAVEENGRVEGQQQQQQQQPAPQRQVVVRRFQIAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLS

Query:  QGMQRAAAPPHPPRPGVRAENAPVAPPAARPEAQNAAFAEGQPGVEVENQPANEGNRAVENENVAE--PGAGNGGLNWWGVVKEIQMIVFGFITSLLPGF
        QGMQRAAAPPHPPRPGVRAENAP+APPAAR E QNAAFAEGQPG EVENQPANE NR  ENENVAE   GAGNGGLNWWGVVKEIQMIVFGFITSLLPGF
Subjt:  QGMQRAAAPPHPPRPGVRAENAPVAPPAARPEAQNAAFAEGQPGVEVENQPANEGNRAVENENVAE--PGAGNGGLNWWGVVKEIQMIVFGFITSLLPGF

Query:  HNHMD
        HNHMD
Subjt:  HNHMD

XP_008453569.1 PREDICTED: uncharacterized protein LOC103494241 isoform X2 [Cucumis melo]

2.2e-149

94.1

Show/hide

Query:  MAEGPEAIPSSSQSSSALKWQNDNLEQTQVPKISSFPTFPNGNVQMIPIMYPALVPGSAASENQNRGAGIYAVPSFPSMGGSIIGMTTNNLIPLTYSIPT
        MAEGPE+IPSSSQSSSALKWQ+DNLEQTQVPKISSFPTFPNGNVQMIPIMYPALVPGSA+SENQNRGAGIYAVPSFPSMGG IIGMTTNNLIPLTYSIPT
Subjt:  MAEGPEAIPSSSQSSSALKWQNDNLEQTQVPKISSFPTFPNGNVQMIPIMYPALVPGSAASENQNRGAGIYAVPSFPSMGGSIIGMTTNNLIPLTYSIPT

Query:  RSDTSNRTSPEGGAAVEENGRVEGQQQQQQQQPAPQRQVVVRRFQIAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLS
         SDTSNRTSPEGG+AVEENGRVEGQQQ QQQQ APQRQVVVRRFQIAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLS
Subjt:  RSDTSNRTSPEGGAAVEENGRVEGQQQQQQQQPAPQRQVVVRRFQIAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLS

Query:  QGMQRAAAPPHPPRPGVRAENAPVAPPAARPEAQNAAFAEGQPGVEVENQPANEGNRAVENENVAE--PGAGNGGLNWWGVVKEIQMIVFGFITSLLPGF
        QGMQRAAAPPHPPRPGVRAENAP+APPAAR E QNAAFAEGQPG EVENQPANE NR  ENENVAE   GAGNGGLNWWGVVKEIQMIVFGFITSLLPGF
Subjt:  QGMQRAAAPPHPPRPGVRAENAPVAPPAARPEAQNAAFAEGQPGVEVENQPANEGNRAVENENVAE--PGAGNGGLNWWGVVKEIQMIVFGFITSLLPGF

Query:  HNHMD
        HNHMD
Subjt:  HNHMD

XP_038880730.1 uncharacterized protein LOC120072333 isoform X1 [Benincasa hispida]

2.7e-155

96.04

Show/hide

Query:  MAEGPEAIPSSSQSSSALKWQNDNLEQTQVPKISSFPTFPNGNVQMIPIMYPALVPGSAASENQNRGAGIYAVPSFPSMGGSIIGMTTNNLIPLTYSIPT
        MAEGPEAIPSSSQSSS+LKWQ+DNLEQTQVPK+SSFPTFPNGNVQMIPIMYPAL PGSAA ENQNRGAGIYAVPSFPSMGG IIGMTTNNLIPLTYSIPT
Subjt:  MAEGPEAIPSSSQSSSALKWQNDNLEQTQVPKISSFPTFPNGNVQMIPIMYPALVPGSAASENQNRGAGIYAVPSFPSMGGSIIGMTTNNLIPLTYSIPT

Query:  RSDTSNRTSPEGGAAVEENGRVEGQQQQQQQQPAPQRQVVVRRFQIAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLS
        RSDTSNRT+PEGG  VEENGRVEGQQQQQQQQPAPQRQVVVRRFQIAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLS
Subjt:  RSDTSNRTSPEGGAAVEENGRVEGQQQQQQQQPAPQRQVVVRRFQIAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLS

Query:  QGMQRAAAPPHPPRPGVRAENAPVAPPAARPEAQNAAFAEGQPGVEVENQPANEGNRAVENENVAEPGAGNGGLNWWGVVKEIQMIVFGFITSLLPGFHN
        QGMQRAAAPPHPPRPGVRAENAPVAPP AR EAQNAAFAEGQPG EVENQPANEGNRAVENENVAEPGAGNGGLNWWGVVKEIQMIVFGFITSLLPGFHN
Subjt:  QGMQRAAAPPHPPRPGVRAENAPVAPPAARPEAQNAAFAEGQPGVEVENQPANEGNRAVENENVAEPGAGNGGLNWWGVVKEIQMIVFGFITSLLPGFHN

Query:  HMD
        HMD
Subjt:  HMD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LU80 Uncharacterized protein

1.2e-150

93.44

Show/hide

Query:  MAEGPEAIPSSSQSSSALKWQNDNLEQTQVPKISSFPTFPNGNVQMIPIMYPALVPGSAASENQNRGAGIYAVPSFPSMGGSIIGMTTNNLIPLTYSIPT
        MAEGPE+IPSSSQSSSALKWQ+DNLEQ+QVPK+ SFPTFPNGNVQMIPIMYPALVPGSA+SENQNRGAGIYAVPSFPSMGG IIGMTTNNLIPLTYSIPT
Subjt:  MAEGPEAIPSSSQSSSALKWQNDNLEQTQVPKISSFPTFPNGNVQMIPIMYPALVPGSAASENQNRGAGIYAVPSFPSMGGSIIGMTTNNLIPLTYSIPT

Query:  RSDTSNRTSPEGGAAVEENGRVEGQQQQQQQQPAPQRQVVVRRFQIAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLS
        RSDTSNRTSPEGG+AVEENGRVEGQQQ QQQQP PQRQVVVRRFQIAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLS
Subjt:  RSDTSNRTSPEGGAAVEENGRVEGQQQQQQQQPAPQRQVVVRRFQIAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLS

Query:  QGMQRAAAPPHPPRPGVRAENAPVAPPAARPEAQNAAFAEGQPGVEVENQPANEGNRAVENENVAE--PGAGNGGLNWWGVVKEIQMIVFGFITSLLPGF
        QGMQRAAAPPHPPRPGVRA+NA VAPPAAR E QNAAFAEGQPG EVENQP NE NR VENENVAE  PGAGNGGLNWWGVVKEIQMIVFGFITSLLPGF
Subjt:  QGMQRAAAPPHPPRPGVRAENAPVAPPAARPEAQNAAFAEGQPGVEVENQPANEGNRAVENENVAE--PGAGNGGLNWWGVVKEIQMIVFGFITSLLPGF

Query:  HNHMD
        HNHMD
Subjt:  HNHMD

A0A1S3BW01 uncharacterized protein LOC103494241 isoform X1

1.1e-151

94.43

Show/hide

Query:  MAEGPEAIPSSSQSSSALKWQNDNLEQTQVPKISSFPTFPNGNVQMIPIMYPALVPGSAASENQNRGAGIYAVPSFPSMGGSIIGMTTNNLIPLTYSIPT
        MAEGPE+IPSSSQSSSALKWQ+DNLEQTQVPKISSFPTFPNGNVQMIPIMYPALVPGSA+SENQNRGAGIYAVPSFPSMGG IIGMTTNNLIPLTYSIPT
Subjt:  MAEGPEAIPSSSQSSSALKWQNDNLEQTQVPKISSFPTFPNGNVQMIPIMYPALVPGSAASENQNRGAGIYAVPSFPSMGGSIIGMTTNNLIPLTYSIPT

Query:  RSDTSNRTSPEGGAAVEENGRVEGQQQQQQQQPAPQRQVVVRRFQIAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLS
        RSDTSNRTSPEGG+AVEENGRVEGQQQ QQQQ APQRQVVVRRFQIAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLS
Subjt:  RSDTSNRTSPEGGAAVEENGRVEGQQQQQQQQPAPQRQVVVRRFQIAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLS

Query:  QGMQRAAAPPHPPRPGVRAENAPVAPPAARPEAQNAAFAEGQPGVEVENQPANEGNRAVENENVAE--PGAGNGGLNWWGVVKEIQMIVFGFITSLLPGF
        QGMQRAAAPPHPPRPGVRAENAP+APPAAR E QNAAFAEGQPG EVENQPANE NR  ENENVAE   GAGNGGLNWWGVVKEIQMIVFGFITSLLPGF
Subjt:  QGMQRAAAPPHPPRPGVRAENAPVAPPAARPEAQNAAFAEGQPGVEVENQPANEGNRAVENENVAE--PGAGNGGLNWWGVVKEIQMIVFGFITSLLPGF

Query:  HNHMD
        HNHMD
Subjt:  HNHMD

A0A1S3BWN3 uncharacterized protein LOC103494241 isoform X2

1.1e-149

94.1

Show/hide

Query:  MAEGPEAIPSSSQSSSALKWQNDNLEQTQVPKISSFPTFPNGNVQMIPIMYPALVPGSAASENQNRGAGIYAVPSFPSMGGSIIGMTTNNLIPLTYSIPT
        MAEGPE+IPSSSQSSSALKWQ+DNLEQTQVPKISSFPTFPNGNVQMIPIMYPALVPGSA+SENQNRGAGIYAVPSFPSMGG IIGMTTNNLIPLTYSIPT
Subjt:  MAEGPEAIPSSSQSSSALKWQNDNLEQTQVPKISSFPTFPNGNVQMIPIMYPALVPGSAASENQNRGAGIYAVPSFPSMGGSIIGMTTNNLIPLTYSIPT

Query:  RSDTSNRTSPEGGAAVEENGRVEGQQQQQQQQPAPQRQVVVRRFQIAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLS
         SDTSNRTSPEGG+AVEENGRVEGQQQ QQQQ APQRQVVVRRFQIAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLS
Subjt:  RSDTSNRTSPEGGAAVEENGRVEGQQQQQQQQPAPQRQVVVRRFQIAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLS

Query:  QGMQRAAAPPHPPRPGVRAENAPVAPPAARPEAQNAAFAEGQPGVEVENQPANEGNRAVENENVAE--PGAGNGGLNWWGVVKEIQMIVFGFITSLLPGF
        QGMQRAAAPPHPPRPGVRAENAP+APPAAR E QNAAFAEGQPG EVENQPANE NR  ENENVAE   GAGNGGLNWWGVVKEIQMIVFGFITSLLPGF
Subjt:  QGMQRAAAPPHPPRPGVRAENAPVAPPAARPEAQNAAFAEGQPGVEVENQPANEGNRAVENENVAE--PGAGNGGLNWWGVVKEIQMIVFGFITSLLPGF

Query:  HNHMD
        HNHMD
Subjt:  HNHMD

A0A5A7UX77 Uncharacterized protein

1.1e-151

94.43

Show/hide

Query:  MAEGPEAIPSSSQSSSALKWQNDNLEQTQVPKISSFPTFPNGNVQMIPIMYPALVPGSAASENQNRGAGIYAVPSFPSMGGSIIGMTTNNLIPLTYSIPT
        MAEGPE+IPSSSQSSSALKWQ+DNLEQTQVPKISSFPTFPNGNVQMIPIMYPALVPGSA+SENQNRGAGIYAVPSFPSMGG IIGMTTNNLIPLTYSIPT
Subjt:  MAEGPEAIPSSSQSSSALKWQNDNLEQTQVPKISSFPTFPNGNVQMIPIMYPALVPGSAASENQNRGAGIYAVPSFPSMGGSIIGMTTNNLIPLTYSIPT

Query:  RSDTSNRTSPEGGAAVEENGRVEGQQQQQQQQPAPQRQVVVRRFQIAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLS
        RSDTSNRTSPEGG+AVEENGRVEGQQQ QQQQ APQRQVVVRRFQIAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLS
Subjt:  RSDTSNRTSPEGGAAVEENGRVEGQQQQQQQQPAPQRQVVVRRFQIAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLS

Query:  QGMQRAAAPPHPPRPGVRAENAPVAPPAARPEAQNAAFAEGQPGVEVENQPANEGNRAVENENVAE--PGAGNGGLNWWGVVKEIQMIVFGFITSLLPGF
        QGMQRAAAPPHPPRPGVRAENAP+APPAAR E QNAAFAEGQPG EVENQPANE NR  ENENVAE   GAGNGGLNWWGVVKEIQMIVFGFITSLLPGF
Subjt:  QGMQRAAAPPHPPRPGVRAENAPVAPPAARPEAQNAAFAEGQPGVEVENQPANEGNRAVENENVAE--PGAGNGGLNWWGVVKEIQMIVFGFITSLLPGF

Query:  HNHMD
        HNHMD
Subjt:  HNHMD

A0A5D3DXX7 Uncharacterized protein

7.8e-153

94.75

Show/hide

Query:  MAEGPEAIPSSSQSSSALKWQNDNLEQTQVPKISSFPTFPNGNVQMIPIMYPALVPGSAASENQNRGAGIYAVPSFPSMGGSIIGMTTNNLIPLTYSIPT
        MAEGPE+IPSSSQSSSALKWQ+DNLEQTQVPKISSFPTFPNGNVQMIPIMYPALVPGSA+SENQNRGAGIYAVPSFPSMGG IIGMTTNNLIPLTYSIPT
Subjt:  MAEGPEAIPSSSQSSSALKWQNDNLEQTQVPKISSFPTFPNGNVQMIPIMYPALVPGSAASENQNRGAGIYAVPSFPSMGGSIIGMTTNNLIPLTYSIPT

Query:  RSDTSNRTSPEGGAAVEENGRVEGQQQQQQQQPAPQRQVVVRRFQIAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLS
        RSDTSNRTSPEGG+AVEENGRVEGQQQ QQQQPAPQRQVVVRRFQIAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLS
Subjt:  RSDTSNRTSPEGGAAVEENGRVEGQQQQQQQQPAPQRQVVVRRFQIAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLS

Query:  QGMQRAAAPPHPPRPGVRAENAPVAPPAARPEAQNAAFAEGQPGVEVENQPANEGNRAVENENVAE--PGAGNGGLNWWGVVKEIQMIVFGFITSLLPGF
        QGMQRAAAPPHPPRPGVRAENAP+APPAAR E QNAAFAEGQPG EVENQPANE NR  ENENVAE   GAGNGGLNWWGVVKEIQMIVFGFITSLLPGF
Subjt:  QGMQRAAAPPHPPRPGVRAENAPVAPPAARPEAQNAAFAEGQPGVEVENQPANEGNRAVENENVAE--PGAGNGGLNWWGVVKEIQMIVFGFITSLLPGF

Query:  HNHMD
        HNHMD
Subjt:  HNHMD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G29960.1 unknown protein

6.5e-67

53.75

Show/hide

Query:  MAEGPEAIPSS--SQSSSALKWQNDNLEQTQVPKISSFPTFPNGNVQMIPIMYPALVPGS---AASENQNRGAGIYAVPSFPSMGGSIIGMTTNNLIPLT
        M E PE + SS   Q S   K ++  ++       S F  +PNG+  M P+ YP LVPGS      E  NRGAGIYAVP     GG + G+ +N LIPLT
Subjt:  MAEGPEAIPSS--SQSSSALKWQNDNLEQTQVPKISSFPTFPNGNVQMIPIMYPALVPGS---AASENQNRGAGIYAVPSFPSMGGSIIGMTTNNLIPLT

Query:  YSIPTRSDTSNRTSPEGGAAVEENGRVEGQQQQQQQQPAPQRQVVVRRFQIAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPL
        Y++PT       T P   A      + +  Q QQQQ PA QR VV RRFQIA Q+DL LILKLAAVIFL +QDGSRQRL VLVI A+++YLYQTGAL P 
Subjt:  YSIPTRSDTSNRTSPEGGAAVEENGRVEGQQQQQQQQPAPQRQVVVRRFQIAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPL

Query:  IRWLSQGMQRAAAPP-HPPRPGVRAENAPVAPPAARPEAQNAAFAEGQPGVEVENQPANEGNRAVENENVAE-PGAGNGGLNWWGVVKEIQMIVFGFITS
        +RWLSQGM RAA PP  P RP VRA+N P    AA P  +NA        +E E   A+ GNRA  N N  E   AGN G  WWG+VKEIQMIVFGFITS
Subjt:  IRWLSQGMQRAAAPP-HPPRPGVRAENAPVAPPAARPEAQNAAFAEGQPGVEVENQPANEGNRAVENENVAE-PGAGNGGLNWWGVVKEIQMIVFGFITS

Query:  LLPGFHN
        LLPGFHN
Subjt:  LLPGFHN

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGGAAGGACCAGAAGCGATCCCTTCAAGCTCTCAATCCTCTTCTGCTTTGAAATGGCAGAACGACAATCTTGAACAGACCCAGGTTCCTAAAATTTCTAGTTTCCC
AACTTTTCCAAATGGTAATGTGCAAATGATTCCAATCATGTATCCTGCACTTGTTCCTGGATCAGCTGCTTCGGAAAATCAAAATCGTGGAGCTGGTATTTATGCGGTTC
CTTCTTTTCCATCAATGGGGGGGTCCATTATTGGAATGACGACTAACAATCTTATTCCTCTGACTTACAGCATACCCACCAGATCTGATACCAGTAATAGAACAAGTCCT
GAGGGTGGCGCAGCCGTTGAAGAGAATGGGCGAGTAGAAGGACAACAACAGCAACAGCAGCAGCAACCAGCACCCCAAAGACAAGTTGTTGTCAGAAGATTTCAAATTGC
AATACAGATTGATTTGTTGCTCATACTGAAGCTCGCTGCTGTTATTTTTCTTGTTCATCAAGATGGTTCAAGACAAAGGCTTATTGTTCTGGTGATTTGTGCTTCACTAG
TCTATCTATATCAAACTGGAGCACTAACACCACTGATACGATGGCTTTCACAAGGCATGCAAAGGGCAGCTGCACCTCCCCATCCACCGAGACCAGGAGTTAGGGCAGAG
AATGCTCCGGTAGCTCCTCCAGCTGCAAGGCCAGAAGCTCAGAACGCTGCTTTTGCAGAGGGACAACCGGGGGTGGAGGTCGAGAACCAACCTGCGAATGAAGGTAACCG
AGCTGTTGAAAATGAGAATGTGGCAGAGCCTGGTGCTGGAAATGGTGGTCTCAACTGGTGGGGAGTGGTGAAGGAAATCCAGATGATAGTCTTTGGCTTTATTACTTCCC
TGCTCCCAGGCTTCCATAACCACATGGACTAG

mRNA sequence

Show/hide mRNA sequence

GAATGTCGCACAATAAAGCAATTTGCCTATTCTCCCTCCGTTAGTTTCTTCCGAAGGCATTCGATTGTCAATTCAATTGAGAGTTTAATAATTTTTGTTAGTTGAATGGA
AAAGAGAGTGTGCTAATTGCTAAACAAAAGTATTTTGAATTTGATTTGATTTACTTCCAATGGCGGAAGGACCAGAAGCGATCCCTTCAAGCTCTCAATCCTCTTCTGCT
TTGAAATGGCAGAACGACAATCTTGAACAGACCCAGGTTCCTAAAATTTCTAGTTTCCCAACTTTTCCAAATGGTAATGTGCAAATGATTCCAATCATGTATCCTGCACT
TGTTCCTGGATCAGCTGCTTCGGAAAATCAAAATCGTGGAGCTGGTATTTATGCGGTTCCTTCTTTTCCATCAATGGGGGGGTCCATTATTGGAATGACGACTAACAATC
TTATTCCTCTGACTTACAGCATACCCACCAGATCTGATACCAGTAATAGAACAAGTCCTGAGGGTGGCGCAGCCGTTGAAGAGAATGGGCGAGTAGAAGGACAACAACAG
CAACAGCAGCAGCAACCAGCACCCCAAAGACAAGTTGTTGTCAGAAGATTTCAAATTGCAATACAGATTGATTTGTTGCTCATACTGAAGCTCGCTGCTGTTATTTTTCT
TGTTCATCAAGATGGTTCAAGACAAAGGCTTATTGTTCTGGTGATTTGTGCTTCACTAGTCTATCTATATCAAACTGGAGCACTAACACCACTGATACGATGGCTTTCAC
AAGGCATGCAAAGGGCAGCTGCACCTCCCCATCCACCGAGACCAGGAGTTAGGGCAGAGAATGCTCCGGTAGCTCCTCCAGCTGCAAGGCCAGAAGCTCAGAACGCTGCT
TTTGCAGAGGGACAACCGGGGGTGGAGGTCGAGAACCAACCTGCGAATGAAGGTAACCGAGCTGTTGAAAATGAGAATGTGGCAGAGCCTGGTGCTGGAAATGGTGGTCT
CAACTGGTGGGGAGTGGTGAAGGAAATCCAGATGATAGTCTTTGGCTTTATTACTTCCCTGCTCCCAGGCTTCCATAACCACATGGACTAGAACATTACTGAAAGCTCAT
GAAGCAATCTGAAGCTGGAAACAATTTTTCTTTTTCTTTTTCTTTTTCTTTTCCTTTGAACAAACAACTTAAAAAGTTATGAAGTATGTTGGACAAATCTGTCTATATAG
ACTGAAACAACGAAATTTAGCAAGTGAATTATGGGTTTAGCTTCATGTTAAAAGGACTTTGTTGTCTTTCTCTTTCCCTCATTCCTAGGAGGTTTCTTTGTAAATGAATG
CCCCCCTTTAAAGTATAACACTTTCTTTGTATTTTAAACATCTTAGAATTTGAGTTTTGATTTGTGCTTTTCCATTGGAGAAGATGTTGAGAAAGAAGCTGAATTACTCC
AAATAGGAGCCTGTTACCAATCGAGAGAAAATATCCATATTGATGATTCATATTTGGCTTAACATTGGGCTTTTCATTTACGCCTCAACTTTATAGAAAA

Protein sequence

Show/hide protein sequence

MAEGPEAIPSSSQSSSALKWQNDNLEQTQVPKISSFPTFPNGNVQMIPIMYPALVPGSAASENQNRGAGIYAVPSFPSMGGSIIGMTTNNLIPLTYSIPTRSDTSNRTSP
EGGAAVEENGRVEGQQQQQQQQPAPQRQVVVRRFQIAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICASLVYLYQTGALTPLIRWLSQGMQRAAAPPHPPRPGVRAE
NAPVAPPAARPEAQNAAFAEGQPGVEVENQPANEGNRAVENENVAEPGAGNGGLNWWGVVKEIQMIVFGFITSLLPGFHNHMD

Lsi06G011990 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome