; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi06G012000 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G012000
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr06:22379742..22382914
RNA-Seq ExpressionLsi06G012000
SyntenyLsi06G012000
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058224.1 uncharacterized protein E6C27_scaffold274G005480 [Cucumis melo var. makuwa]1.0e-9385.65Show/hide
Query:  MARILSLSQSFISSKLQSAPLKLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR
        MAR+ SLSQSFISSK Q     LS+LIPSSF LGHRNRSTRSGKVKFIEIDLESSSFGADSE+LAIRKLDDFVQ+IIVERSTPDWLPFVPGSSFWVPPRR
Subjt:  MARILSLSQSFISSKLQSAPLKLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR

Query:  TKPRRVVDLFDKLVEPITKEDSPSLANARGWPCLDFFAKESISGATRLAPVDTELETSNEVELEIEVKTPTSSLDGCWRFEKPNRVENDGDERPERNGML
         KPRRVVDLFDKLVEPI KEDSPSLANARGWPCLDFFAKESISG TRLAPVDTELETSN  ELEI+V+TPT +LDGC RFE+PN VE+DGDER ERN +L
Subjt:  TKPRRVVDLFDKLVEPITKEDSPSLANARGWPCLDFFAKESISGATRLAPVDTELETSNEVELEIEVKTPTSSLDGCWRFEKPNRVENDGDERPERNGML

Query:  YRWFQFDCC
        YR FQF CC
Subjt:  YRWFQFDCC

KAG6587735.1 hypothetical protein SDJN03_16300, partial [Cucurbita argyrosperma subsp. sororia]1.5e-8494.22Show/hide
Query:  MARILSLSQSFISSKLQSAPLKLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR
        MARILSLSQSFIS+KLQSAPLKLSLLIPSSF LGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR
Subjt:  MARILSLSQSFISSKLQSAPLKLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR

Query:  TKPRRVVDLFDKLVEPITKEDSPSLANARGWPCLDFFAKESISGATRLAPVDTELETSNEVELEIEVKTPTSS
         KPR+VVDLFDKLVEP+TKE+SPSLANARGWPCLDFFAKESISGATRL PVD+ELETSNE+ELEIEVKTPTS+
Subjt:  TKPRRVVDLFDKLVEPITKEDSPSLANARGWPCLDFFAKESISGATRLAPVDTELETSNEVELEIEVKTPTSS

XP_022932487.1 uncharacterized protein LOC111438888 isoform X1 [Cucurbita moschata]7.4e-8493.64Show/hide
Query:  MARILSLSQSFISSKLQSAPLKLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR
        MARILSLSQSFIS+KLQSAP KLSLLIPSSF LGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR
Subjt:  MARILSLSQSFISSKLQSAPLKLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR

Query:  TKPRRVVDLFDKLVEPITKEDSPSLANARGWPCLDFFAKESISGATRLAPVDTELETSNEVELEIEVKTPTSS
         KPR+VVDLFDKLVEP+TKE+SPSLANARGWPCLDFFAKESISGATRL PVD+ELETSNE+ELEIEVKTPTS+
Subjt:  TKPRRVVDLFDKLVEPITKEDSPSLANARGWPCLDFFAKESISGATRLAPVDTELETSNEVELEIEVKTPTSS

XP_022974211.1 uncharacterized protein LOC111472830 isoform X1 [Cucurbita maxima]3.3e-8494.22Show/hide
Query:  MARILSLSQSFISSKLQSAPLKLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR
        MARILSLSQSFIS+KLQSAPLKLSLLIPSSF LGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR
Subjt:  MARILSLSQSFISSKLQSAPLKLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR

Query:  TKPRRVVDLFDKLVEPITKEDSPSLANARGWPCLDFFAKESISGATRLAPVDTELETSNEVELEIEVKTPTSS
         KPR+VVDLFDKLVEP+TKE+SPSLANARGWPCLDFFAKESISGATRL PVD ELETSNE+ELEIEVKTPTS+
Subjt:  TKPRRVVDLFDKLVEPITKEDSPSLANARGWPCLDFFAKESISGATRLAPVDTELETSNEVELEIEVKTPTSS

XP_038880607.1 uncharacterized protein LOC120072253 [Benincasa hispida]4.4e-8495.38Show/hide
Query:  MARILSLSQSFISSKLQSAPLKLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR
        MARILSLSQSFISSK QSAPLKLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSF ADSEVLAIRKLDDFVQ+IIVERSTP+WLPFVPGSSFWVPPRR
Subjt:  MARILSLSQSFISSKLQSAPLKLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR

Query:  TKPRRVVDLFDKLVEPITKEDSPSLANARGWPCLDFFAKESISGATRLAPVDTELETSNEVELEIEVKTPTSS
         KPRRVVDLFDKLVEPI KEDSPSLANARGWPCLDFFAKES SGATRLAPVDTELETSNEVELEIEVKTPTS+
Subjt:  TKPRRVVDLFDKLVEPITKEDSPSLANARGWPCLDFFAKESISGATRLAPVDTELETSNEVELEIEVKTPTSS

TrEMBL top hitse value%identityAlignment
A0A5D3DYD5 Uncharacterized protein5.0e-9485.65Show/hide
Query:  MARILSLSQSFISSKLQSAPLKLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR
        MAR+ SLSQSFISSK Q     LS+LIPSSF LGHRNRSTRSGKVKFIEIDLESSSFGADSE+LAIRKLDDFVQ+IIVERSTPDWLPFVPGSSFWVPPRR
Subjt:  MARILSLSQSFISSKLQSAPLKLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR

Query:  TKPRRVVDLFDKLVEPITKEDSPSLANARGWPCLDFFAKESISGATRLAPVDTELETSNEVELEIEVKTPTSSLDGCWRFEKPNRVENDGDERPERNGML
         KPRRVVDLFDKLVEPI KEDSPSLANARGWPCLDFFAKESISG TRLAPVDTELETSN  ELEI+V+TPT +LDGC RFE+PN VE+DGDER ERN +L
Subjt:  TKPRRVVDLFDKLVEPITKEDSPSLANARGWPCLDFFAKESISGATRLAPVDTELETSNEVELEIEVKTPTSSLDGCWRFEKPNRVENDGDERPERNGML

Query:  YRWFQFDCC
        YR FQF CC
Subjt:  YRWFQFDCC

A0A6J1C135 uncharacterized protein LOC1110073001.6e-7986.71Show/hide
Query:  MARILSLSQSFISSKLQSAPLKLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR
        MARIL+LSQS + SK QS+P +LSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFG DS++LAIRKLDDFVQKIIVERSTPDW+PFVPGSSFWVPPRR
Subjt:  MARILSLSQSFISSKLQSAPLKLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR

Query:  TKPRRVVDLFDKLVEPITKEDSPSLANARGWPCLDFFAKESISGATRLAPVDTELETSNEVELEIEVKTPTSS
         KPR+VVDLFDKLVEP+TKE+SPSLANARGWPCL+FFAKESISG+TRLAPVDTELET+NEVELEI+VK P S+
Subjt:  TKPRRVVDLFDKLVEPITKEDSPSLANARGWPCLDFFAKESISGATRLAPVDTELETSNEVELEIEVKTPTSS

A0A6J1E5F5 uncharacterized protein LOC1114301027.8e-7989.47Show/hide
Query:  MARILSLSQSFISSKLQSAPLKLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR
        MARILS SQSFISSK+QSAPLKL LLIPSSF LGHRNRSTRSGK KFIEIDLESSSFGADSEVLAIRKLDDFV++IIVERSTPDW+PFVPGSSFWVPPRR
Subjt:  MARILSLSQSFISSKLQSAPLKLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR

Query:  TKPRRVVDLFDKLVEPITKEDSPSLANARGWPCLDFFAKESISGATRLAPVDTELETSNEVELEIEVKTPT
        TKPR+VVDLFDKLVEP++KE SPSLAN+RGWPCLDFFAK SISGATRLAPVDTE + SNEVELEIEVKT T
Subjt:  TKPRRVVDLFDKLVEPITKEDSPSLANARGWPCLDFFAKESISGATRLAPVDTELETSNEVELEIEVKTPT

A0A6J1EWU2 uncharacterized protein LOC111438888 isoform X13.6e-8493.64Show/hide
Query:  MARILSLSQSFISSKLQSAPLKLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR
        MARILSLSQSFIS+KLQSAP KLSLLIPSSF LGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR
Subjt:  MARILSLSQSFISSKLQSAPLKLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR

Query:  TKPRRVVDLFDKLVEPITKEDSPSLANARGWPCLDFFAKESISGATRLAPVDTELETSNEVELEIEVKTPTSS
         KPR+VVDLFDKLVEP+TKE+SPSLANARGWPCLDFFAKESISGATRL PVD+ELETSNE+ELEIEVKTPTS+
Subjt:  TKPRRVVDLFDKLVEPITKEDSPSLANARGWPCLDFFAKESISGATRLAPVDTELETSNEVELEIEVKTPTSS

A0A6J1IDD9 uncharacterized protein LOC111472830 isoform X11.6e-8494.22Show/hide
Query:  MARILSLSQSFISSKLQSAPLKLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR
        MARILSLSQSFIS+KLQSAPLKLSLLIPSSF LGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR
Subjt:  MARILSLSQSFISSKLQSAPLKLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRR

Query:  TKPRRVVDLFDKLVEPITKEDSPSLANARGWPCLDFFAKESISGATRLAPVDTELETSNEVELEIEVKTPTSS
         KPR+VVDLFDKLVEP+TKE+SPSLANARGWPCLDFFAKESISGATRL PVD ELETSNE+ELEIEVKTPTS+
Subjt:  TKPRRVVDLFDKLVEPITKEDSPSLANARGWPCLDFFAKESISGATRLAPVDTELETSNEVELEIEVKTPTSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G16840.2 unknown protein2.6e-1839.58Show/hide
Query:  MARILSLSQSFISSKLQSAPLKLSLLIPSSFALGHRNRST-RSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPP-
        MAR  S S S    +  +A    S L+PSS  +  R++S+ R G +   EID  ++S      +  I+KL+D V +I V R+ PDWLPFVPG+S+WVPP 
Subjt:  MARILSLSQSFISSKLQSAPLKLSLLIPSSFALGHRNRST-RSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPP-

Query:  -RRTKPRRVVDLFDKLVEPITKEDSPSLANARGWPCLDFFAKES
           ++   +  L  KL  P+T E+S S  ++ GWP  D+F K S
Subjt:  -RRTKPRRVVDLFDKLVEPITKEDSPSLANARGWPCLDFFAKES

AT1G16840.3 unknown protein4.4e-1836.09Show/hide
Query:  MARILSLSQSFISSKLQSAPLKLSLLIPSSFALGHRNRST-RSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPP-
        MAR  S S S    +  +A    S L+PSS  +  R++S+ R G +   EID  ++S      +  I+KL+D V +I V R+ PDWLPFVPG+S+WVPP 
Subjt:  MARILSLSQSFISSKLQSAPLKLSLLIPSSFALGHRNRST-RSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPP-

Query:  -RRTKPRRVVDLFDKLVEPITKEDSPSLANARGWPCLDFFAKESISGATRLAPVDTELETSNEVELEIE
           ++   +  L  KL  P+T E+S S  ++ GWP  D+F K       +   ++T+ ET++  E   E
Subjt:  -RRTKPRRVVDLFDKLVEPITKEDSPSLANARGWPCLDFFAKESISGATRLAPVDTELETSNEVELEIE

AT1G16840.4 unknown protein4.4e-1836.09Show/hide
Query:  MARILSLSQSFISSKLQSAPLKLSLLIPSSFALGHRNRST-RSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPP-
        MAR  S S S    +  +A    S L+PSS  +  R++S+ R G +   EID  ++S      +  I+KL+D V +I V R+ PDWLPFVPG+S+WVPP 
Subjt:  MARILSLSQSFISSKLQSAPLKLSLLIPSSFALGHRNRST-RSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPP-

Query:  -RRTKPRRVVDLFDKLVEPITKEDSPSLANARGWPCLDFFAKESISGATRLAPVDTELETSNEVELEIE
           ++   +  L  KL  P+T E+S S  ++ GWP  D+F K       +   ++T+ ET++  E   E
Subjt:  -RRTKPRRVVDLFDKLVEPITKEDSPSLANARGWPCLDFFAKESISGATRLAPVDTELETSNEVELEIE

AT1G78890.1 unknown protein7.8e-2339.18Show/hide
Query:  MARILSLSQSFISSKLQSAPLKLSLLIPSSFALGHR----NRSTRSGKVKFI-EIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFW
        MAR LS S S    +  +A    SLL+PSS  +  R    NR + S  +  I EID+ +           + KL+D V +I+V RS PDWLPFVPG+SFW
Subjt:  MARILSLSQSFISSKLQSAPLKLSLLIPSSFALGHR----NRSTRSGKVKFI-EIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFW

Query:  VPPRRTKPRRVVDLFDKLVEPITKEDSPSLANARGWPCLDFFAKESISGATRLAPVDTELETSNEVELEIE
        VPP R++   +  L +KL  PI+ E+S S+++ RGWPC D+F K       +   V+TE+ ++     E E
Subjt:  VPPRRTKPRRVVDLFDKLVEPITKEDSPSLANARGWPCLDFFAKESISGATRLAPVDTELETSNEVELEIE

AT2G19180.1 unknown protein2.7e-2340.16Show/hide
Query:  IEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRRTKPRRVVDLFDKLVEPITKEDSPSLANARGWPCLDFFAKESISGATR
        IE++++S +   ++E   ++KL++FV++IIV  STPDWLPF PGSSFWVPP +    ++ +L DK+  P+T+E+S SL++  GWPC  FF          
Subjt:  IEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRRTKPRRVVDLFDKLVEPITKEDSPSLANARGWPCLDFFAKESISGATR

Query:  LAPVDTELETSNEVELEIEVKTPTSSL
        + P D    T  E E  +E+K P + +
Subjt:  LAPVDTELETSNEVELEIEVKTPTSSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCGAATTCTATCTCTTTCCCAATCTTTCATCTCCTCCAAGTTGCAATCTGCGCCATTGAAATTATCGCTGTTGATTCCATCTTCCTTTGCCCTCGGTCATCGGAA
CCGATCTACACGTTCCGGTAAGGTCAAATTCATCGAAATTGACCTCGAATCGTCCTCTTTCGGGGCTGATTCAGAGGTTCTTGCTATTAGGAAGCTCGACGACTTTGTAC
AGAAGATTATCGTTGAGCGATCGACTCCTGATTGGCTTCCGTTTGTTCCTGGTTCGTCATTTTGGGTTCCTCCACGCCGTACCAAACCACGCAGGGTGGTCGACCTATTC
GATAAATTGGTTGAACCGATCACCAAAGAGGATTCCCCTTCCCTTGCTAATGCCCGTGGTTGGCCCTGCTTAGATTTTTTCGCCAAAGAGTCCATCTCTGGAGCAACTCG
GTTGGCTCCGGTAGATACTGAGTTGGAAACTTCAAATGAGGTGGAGTTGGAGATTGAGGTGAAGACACCAACAAGTTCGTTAGATGGTTGTTGGAGATTCGAGAAACCGA
ATAGAGTGGAAAATGATGGTGACGAGAGGCCGGAGAGAAATGGGATGCTCTACAGATGGTTCCAGTTTGACTGCTGTGTGCTTGAAGATCAATCTAAGTTCGTAGTTGCA
ATATTTTCTAGACTGGTTGGAACTTTTGTGCTATTGGCATACTGGTTTTATGTGTTGCTAGAACCTTGA
mRNA sequenceShow/hide mRNA sequence
TACTCATCGTCGAATCTAAGTTCGTTCCCACACCCATAGCTAAAGGATAAAGAGAGAACTCTTCGATTCATAGCGTTCAAATTTCCTTCCTCTGGTGTTCTTCGCATGGC
CCGAATTCTATCTCTTTCCCAATCTTTCATCTCCTCCAAGTTGCAATCTGCGCCATTGAAATTATCGCTGTTGATTCCATCTTCCTTTGCCCTCGGTCATCGGAACCGAT
CTACACGTTCCGGTAAGGTCAAATTCATCGAAATTGACCTCGAATCGTCCTCTTTCGGGGCTGATTCAGAGGTTCTTGCTATTAGGAAGCTCGACGACTTTGTACAGAAG
ATTATCGTTGAGCGATCGACTCCTGATTGGCTTCCGTTTGTTCCTGGTTCGTCATTTTGGGTTCCTCCACGCCGTACCAAACCACGCAGGGTGGTCGACCTATTCGATAA
ATTGGTTGAACCGATCACCAAAGAGGATTCCCCTTCCCTTGCTAATGCCCGTGGTTGGCCCTGCTTAGATTTTTTCGCCAAAGAGTCCATCTCTGGAGCAACTCGGTTGG
CTCCGGTAGATACTGAGTTGGAAACTTCAAATGAGGTGGAGTTGGAGATTGAGGTGAAGACACCAACAAGTTCGTTAGATGGTTGTTGGAGATTCGAGAAACCGAATAGA
GTGGAAAATGATGGTGACGAGAGGCCGGAGAGAAATGGGATGCTCTACAGATGGTTCCAGTTTGACTGCTGTGTGCTTGAAGATCAATCTAAGTTCGTAGTTGCAATATT
TTCTAGACTGGTTGGAACTTTTGTGCTATTGGCATACTGGTTTTATGTGTTGCTAGAACCTTGA
Protein sequenceShow/hide protein sequence
MARILSLSQSFISSKLQSAPLKLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGADSEVLAIRKLDDFVQKIIVERSTPDWLPFVPGSSFWVPPRRTKPRRVVDLF
DKLVEPITKEDSPSLANARGWPCLDFFAKESISGATRLAPVDTELETSNEVELEIEVKTPTSSLDGCWRFEKPNRVENDGDERPERNGMLYRWFQFDCCVLEDQSKFVVA
IFSRLVGTFVLLAYWFYVLLEP