CuGenDBv2

Gene ID	Lsi06G012140
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	60S ribosomal protein L7
Genome location	chr06:22525731..22527040
RNA-Seq Expression	Lsi06G012140
Synteny	Lsi06G012140
Gene Ontology terms	GO:0000463 - maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process) GO:0022625 - cytosolic large ribosomal subunit (cellular component) GO:0003723 - RNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR035808 - Ribosomal protein L7, eukaryotic/archaeal IPR036919 - Ribosomal protein L30, ferredoxin-like fold domain superfamily IPR039699 - Ribosomal protein L7/L30

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0049249.1 60S ribosomal protein L7-4-like [Cucumis melo var. makuwa]

5.6e-70

97.78

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Query:  LFEIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKL
        L +IFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICAEDLIHEI+TVGPHFKEANNFLWPFKL
Subjt:  LFEIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKL

Query:  KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN
        KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN
Subjt:  KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN

KAG6589682.1 60S ribosomal protein L7-4, partial [Cucurbita argyrosperma subsp. sororia]

9.6e-70

97.78

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Query:  LFEIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKL
        L +IFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIIC EDLIHEILTVGPHFKEANNFLWPFKL
Subjt:  LFEIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKL

Query:  KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN
        KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN
Subjt:  KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN

XP_022921914.1 60S ribosomal protein L7-2 [Cucurbita moschata]

9.6e-70

97.78

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Query:  LFEIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKL
        L +IFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIIC EDLIHEILTVGPHFKEANNFLWPFKL
Subjt:  LFEIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKL

Query:  KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN
        KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN
Subjt:  KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN

XP_023516710.1 60S ribosomal protein L7-2 [Cucurbita pepo subsp. pepo]

9.6e-70

97.78

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Query:  LFEIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKL
        L +IFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIIC EDLIHEILTVGPHFKEANNFLWPFKL
Subjt:  LFEIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKL

Query:  KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN
        KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN
Subjt:  KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN

XP_038880671.1 60S ribosomal protein L7-2 [Benincasa hispida]

5.6e-70

97.78

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Query:  LFEIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKL
        L +IFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICAEDLIHEI+TVGPHFKEANNFLWPFKL
Subjt:  LFEIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKL

Query:  KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN
        KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN
Subjt:  KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN

TrEMBL top hits

e value

%identity

Alignment

A0A1S3AWN7 60S ribosomal protein L7-4-like

1.4e-69

97.04

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Query:  LFEIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKL
        L +IFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRG GKLNKRRTALTDNSIIEQALGKFGIICAEDLIHEI+TVGPHFKEANNFLWPFKL
Subjt:  LFEIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKL

Query:  KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN
        KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN
Subjt:  KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN

A0A5A7U6V9 60S ribosomal protein L7-4-like

2.7e-70

97.78

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Query:  LFEIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKL
        L +IFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICAEDLIHEI+TVGPHFKEANNFLWPFKL
Subjt:  LFEIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKL

Query:  KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN
        KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN
Subjt:  KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN

A0A6J1E1W3 60S ribosomal protein L7-2

4.7e-70

97.78

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Query:  LFEIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKL
        L +IFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIIC EDLIHEILTVGPHFKEANNFLWPFKL
Subjt:  LFEIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKL

Query:  KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN
        KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN
Subjt:  KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN

A0A6J1ETP4 60S ribosomal protein L7-2-like

6.1e-70

97.78

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Query:  LFEIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKL
        L +IFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRT LTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKL
Subjt:  LFEIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKL

Query:  KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN
        KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN
Subjt:  KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN

A0A6J1JDW2 60S ribosomal protein L7-2

4.7e-70

97.78

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Query:  LFEIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKL
        L +IFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIIC EDLIHEILTVGPHFKEANNFLWPFKL
Subjt:  LFEIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKL

Query:  KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN
        KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN
Subjt:  KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN

SwissProt top hits

e value

%identity

Alignment

P05426 60S ribosomal protein L7

4.1e-55

73.33

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Query:  LFEIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKL
        L +IFNG F+K+NKA++NML  VEPY+ +GYPNLKSV ELIYKRG+GK+NK+R ALTDNS++ ++LGKFGIIC EDLIHEI TVG  FKEANNFLWPFKL
Subjt:  LFEIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKL

Query:  KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN
         +P GG+KKK  H+VEGGDAGNRE+ IN LIRRMN
Subjt:  KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN

P14148 60S ribosomal protein L7

2.4e-55

74.07

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Query:  LFEIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKL
        L +IFNG F+K+NKA++NML  VEPY+ +GYPNLKSV ELIYKRG+GK+NK+R ALTDNS+I ++LGKFGIIC EDLIHEI TVG  FKEANNFLWPFKL
Subjt:  LFEIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKL

Query:  KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN
         +P GG+KKK  H+VEGGDAGNRE+ IN LIRRMN
Subjt:  KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN

P60039 60S ribosomal protein L7-3

1.4e-66

88.15

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Query:  LFEIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKL
        L +IFNGVFLKVNKAT+NML RVEPYVTYGYPNLKSVKELIYKRG+GKLN +R ALTDNSI++QALGK GIIC EDLIHEI+TVGPHFKEANNFLWPF+L
Subjt:  LFEIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKL

Query:  KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN
        KAPLGGLKKKRNHYVEGGDAGNREN+INEL+RRMN
Subjt:  KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN

P60040 60S ribosomal protein L7-2

6.1e-67

89.63

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Query:  LFEIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKL
        L +IFNGVFLKVNKAT+NML RVEPYVTYG+PNLKSVKELIYKRG+GKLN +R ALTDNSI+EQALGK GIIC EDLIHEILTVGPHFKEANNFLWPF+L
Subjt:  LFEIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKL

Query:  KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN
        KAPLGGLKKKRNHYVEGGDAGNREN+INELIRRMN
Subjt:  KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN

Q9LHP1 60S ribosomal protein L7-4

4.6e-67

88.15

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Query:  LFEIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKL
        L +IFNGVFLKVNKAT+NML RVEPYVTYGYPNLKSVKELIYKRGFGKLN +RTALTDNSI++Q LGK GIIC EDLIHEI+TVGPHFKEANNFLWPF+L
Subjt:  LFEIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKL

Query:  KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN
        KAPLGG+KKKRNHYVEGGDAGNREN+INEL+RRMN
Subjt:  KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN

Arabidopsis top hits

e value

%identity

Alignment

AT2G01250.1 Ribosomal protein L30/L7 family protein

4.3e-68

89.63

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Query:  LFEIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKL
        L +IFNGVFLKVNKAT+NML RVEPYVTYG+PNLKSVKELIYKRG+GKLN +R ALTDNSI+EQALGK GIIC EDLIHEILTVGPHFKEANNFLWPF+L
Subjt:  LFEIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKL

Query:  KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN
        KAPLGGLKKKRNHYVEGGDAGNREN+INELIRRMN
Subjt:  KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN

AT2G44120.1 Ribosomal protein L30/L7 family protein

9.6e-68

88.15

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Query:  LFEIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKL
        L +IFNGVFLKVNKAT+NML RVEPYVTYGYPNLKSVKELIYKRG+GKLN +R ALTDNSI++QALGK GIIC EDLIHEI+TVGPHFKEANNFLWPF+L
Subjt:  LFEIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKL

Query:  KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN
        KAPLGGLKKKRNHYVEGGDAGNREN+INEL+RRMN
Subjt:  KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN

AT3G13580.1 Ribosomal protein L30/L7 family protein

3.3e-68

88.15

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Query:  LFEIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKL
        L +IFNGVFLKVNKAT+NML RVEPYVTYGYPNLKSVKELIYKRGFGKLN +RTALTDNSI++Q LGK GIIC EDLIHEI+TVGPHFKEANNFLWPF+L
Subjt:  LFEIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKL

Query:  KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN
        KAPLGG+KKKRNHYVEGGDAGNREN+INEL+RRMN
Subjt:  KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN

AT3G13580.2 Ribosomal protein L30/L7 family protein

3.3e-68

88.15

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Query:  LFEIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKL
        L +IFNGVFLKVNKAT+NML RVEPYVTYGYPNLKSVKELIYKRGFGKLN +RTALTDNSI++Q LGK GIIC EDLIHEI+TVGPHFKEANNFLWPF+L
Subjt:  LFEIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKL

Query:  KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN
        KAPLGG+KKKRNHYVEGGDAGNREN+INEL+RRMN
Subjt:  KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN

AT3G13580.3 Ribosomal protein L30/L7 family protein

3.3e-68

88.15

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Query:  LFEIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKL
        L +IFNGVFLKVNKAT+NML RVEPYVTYGYPNLKSVKELIYKRGFGKLN +RTALTDNSI++Q LGK GIIC EDLIHEI+TVGPHFKEANNFLWPF+L
Subjt:  LFEIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKL

Query:  KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN
        KAPLGG+KKKRNHYVEGGDAGNREN+INEL+RRMN
Subjt:  KAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN

Sequences

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CDS sequence

Show/hide CDS sequence

mRNA sequence

Show/hide mRNA sequence

ATGTTAGTGAGTCTAGCCTTGGTTCTGGCCACTTTCCCTGACAGTGGTCTTGGGATGTATTTGAGTTGGCAAATGATAGGGTTCTCCCCAATTTTTGTAATGTCATACCT
CTTCGAAATTTTCAATGGTGTCTTTTTGAAAGTTAACAAGGCAACATTGAATATGTTGCACAGAGTGGAGCCTTATGTTACATATGGCTATCCTAACTTGAAGAGTGTTA
AAGAACTCATTTATAAGAGAGGCTTTGGAAAACTCAACAAGCGAAGAACTGCTTTGACTGATAACTCCATCATCGAGCAGGCTCTTGGGAAGTTTGGAATTATTTGTGCC
GAAGATCTCATCCATGAGATTTTGACAGTGGGACCCCATTTTAAGGAGGCAAACAATTTCCTCTGGCCCTTCAAGCTGAAAGCTCCTCTGGGTGGATTGAAGAAGAAAAG
AAATCACTATGTCGAAGGAGGCGATGCTGGAAACCGCGAAAACTACATCAATGAGCTAATCAGAAGGATGAATTAAGATACTTTTTGTGGGTTGTTTATTTGAAGTGTTT
TGCTTGGCGCTGGAAAATTTCTGCTAATAGGTTTGTCATTTGAAGTATCGTTTTTGGAATCAGAATGTTTTGCTATTTTCATCATTAGTGTACTTCTATCCTCGGAATTT
TTATCTTTGAGAATGCTTTAATTTTTGCTTATATTAATTAGAGAATGTTCTAAAATTTTGATGTTAAATGTCATGACTTTCATGTTCTTGATTGGCCTTTTC

Protein sequence

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MLVSLALVLATFPDSGLGMYLSWQMIGFSPIFVMSYLFEIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTALTDNSIIEQALGKFGIICA
EDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN

Lsi06G012140 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome