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Lsi06G012150 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G012150
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description60S ribosomal protein L7-2-like
Genome locationchr06:22527058..22527889
RNA-Seq ExpressionLsi06G012150
SyntenyLsi06G012150
Gene Ontology termsGO:0000463 - maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR012988 - Ribosomal protein L30, N-terminal
IPR016082 - Ribosomal protein L30, ferredoxin-like fold domain
IPR036919 - Ribosomal protein L30, ferredoxin-like fold domain superfamily
IPR039699 - Ribosomal protein L7/L30


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049249.1 60S ribosomal protein L7-4-like [Cucumis melo var. makuwa]2.5e-5093.04Show/hide
Query:  MSGEGVKGGPVVPESVLKKRKRNEEWALAEKQGLEAAKKKNAENRKLIYNRAKLYAEKYDEQQKDLIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAID
        MSG+GVKGGPVVPESVLKKRKRN+EWALAEKQGLEAAKKKNAENRKLIYNRAKLYA++YDEQQK+LI+LKREAKLKGGFYVDPEAKLLFIIRIRGINAID
Subjt:  MSGEGVKGGPVVPESVLKKRKRNEEWALAEKQGLEAAKKKNAENRKLIYNRAKLYAEKYDEQQKDLIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAID

Query:  PKTKKILQLLRLRQV
        PKT+KILQLLRLRQ+
Subjt:  PKTKKILQLLRLRQV

KAG6587726.1 60S ribosomal protein L7-4, partial [Cucurbita argyrosperma subsp. sororia]7.2e-5091.38Show/hide
Query:  DMSGEGVKGGPVVPESVLKKRKRNEEWALAEKQGLEAAKKKNAENRKLIYNRAKLYAEKYDEQQKDLIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAI
        +MS EGVKGGPVVPESVLKKRKRNEEWALAEK+GLEAAKKKNAENRKLI+NRAKLYA++YDEQQK+L+RLKREA+LKGGFYVDPEAKLLFIIRIRGINAI
Subjt:  DMSGEGVKGGPVVPESVLKKRKRNEEWALAEKQGLEAAKKKNAENRKLIYNRAKLYAEKYDEQQKDLIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAI

Query:  DPKTKKILQLLRLRQV
        DPKTKKILQLLRLRQ+
Subjt:  DPKTKKILQLLRLRQV

KAG7021690.1 60S ribosomal protein L7-4, partial [Cucurbita argyrosperma subsp. argyrosperma]9.4e-5092.17Show/hide
Query:  MSGEGVKGGPVVPESVLKKRKRNEEWALAEKQGLEAAKKKNAENRKLIYNRAKLYAEKYDEQQKDLIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAID
        MS EGVKGGPVVPESVLKKRKRNEEWALAEK+GLEAAKKKNAENRKLI+NRAKLYA++YDEQQK+L+RLKREA+LKGGFYVDPEAKLLFIIRIRGINAID
Subjt:  MSGEGVKGGPVVPESVLKKRKRNEEWALAEKQGLEAAKKKNAENRKLIYNRAKLYAEKYDEQQKDLIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAID

Query:  PKTKKILQLLRLRQV
        PKTKKILQLLRLRQ+
Subjt:  PKTKKILQLLRLRQV

XP_008438517.1 PREDICTED: 60S ribosomal protein L7-4-like [Cucumis melo]2.5e-5093.04Show/hide
Query:  MSGEGVKGGPVVPESVLKKRKRNEEWALAEKQGLEAAKKKNAENRKLIYNRAKLYAEKYDEQQKDLIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAID
        MSG+GVKGGPVVPESVLKKRKRN+EWALAEKQGLEAAKKKNAENRKLIYNRAKLYA++YDEQQK+LI+LKREAKLKGGFYVDPEAKLLFIIRIRGINAID
Subjt:  MSGEGVKGGPVVPESVLKKRKRNEEWALAEKQGLEAAKKKNAENRKLIYNRAKLYAEKYDEQQKDLIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAID

Query:  PKTKKILQLLRLRQV
        PKT+KILQLLRLRQ+
Subjt:  PKTKKILQLLRLRQV

XP_038880671.1 60S ribosomal protein L7-2 [Benincasa hispida]7.7e-5296.52Show/hide
Query:  MSGEGVKGGPVVPESVLKKRKRNEEWALAEKQGLEAAKKKNAENRKLIYNRAKLYAEKYDEQQKDLIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAID
        MSGEGVKGGPVVPESVLKKRKRNEEWALAEKQGLEAAKKKNAENRKLIYNRAKLYA++YDEQQK+LIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAID
Subjt:  MSGEGVKGGPVVPESVLKKRKRNEEWALAEKQGLEAAKKKNAENRKLIYNRAKLYAEKYDEQQKDLIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAID

Query:  PKTKKILQLLRLRQV
        PKTKKILQLLRLRQ+
Subjt:  PKTKKILQLLRLRQV

TrEMBL top hitse value%identityAlignment
A0A1S3AWN7 60S ribosomal protein L7-4-like1.2e-5093.04Show/hide
Query:  MSGEGVKGGPVVPESVLKKRKRNEEWALAEKQGLEAAKKKNAENRKLIYNRAKLYAEKYDEQQKDLIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAID
        MSG+GVKGGPVVPESVLKKRKRN+EWALAEKQGLEAAKKKNAENRKLIYNRAKLYA++YDEQQK+LI+LKREAKLKGGFYVDPEAKLLFIIRIRGINAID
Subjt:  MSGEGVKGGPVVPESVLKKRKRNEEWALAEKQGLEAAKKKNAENRKLIYNRAKLYAEKYDEQQKDLIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAID

Query:  PKTKKILQLLRLRQV
        PKT+KILQLLRLRQ+
Subjt:  PKTKKILQLLRLRQV

A0A5A7U6V9 60S ribosomal protein L7-4-like1.2e-5093.04Show/hide
Query:  MSGEGVKGGPVVPESVLKKRKRNEEWALAEKQGLEAAKKKNAENRKLIYNRAKLYAEKYDEQQKDLIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAID
        MSG+GVKGGPVVPESVLKKRKRN+EWALAEKQGLEAAKKKNAENRKLIYNRAKLYA++YDEQQK+LI+LKREAKLKGGFYVDPEAKLLFIIRIRGINAID
Subjt:  MSGEGVKGGPVVPESVLKKRKRNEEWALAEKQGLEAAKKKNAENRKLIYNRAKLYAEKYDEQQKDLIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAID

Query:  PKTKKILQLLRLRQV
        PKT+KILQLLRLRQ+
Subjt:  PKTKKILQLLRLRQV

A0A6J1C1C8 60S ribosomal protein L7-21.7e-4991.3Show/hide
Query:  MSGEGVKGGPVVPESVLKKRKRNEEWALAEKQGLEAAKKKNAENRKLIYNRAKLYAEKYDEQQKDLIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAID
        MSGEGVKGGPVVPESVLKKRKRNEEWALAEK+ LEA+KKK+AENRKLIYNRAKLYA++YDEQQK+LIRLKREAKLKGGFYVDPEAKLLFI+RIRGINAID
Subjt:  MSGEGVKGGPVVPESVLKKRKRNEEWALAEKQGLEAAKKKNAENRKLIYNRAKLYAEKYDEQQKDLIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAID

Query:  PKTKKILQLLRLRQV
        PKT+KILQLLRLRQ+
Subjt:  PKTKKILQLLRLRQV

A0A6J1ETP4 60S ribosomal protein L7-2-like4.5e-5092.17Show/hide
Query:  MSGEGVKGGPVVPESVLKKRKRNEEWALAEKQGLEAAKKKNAENRKLIYNRAKLYAEKYDEQQKDLIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAID
        MS EGVKGGPVVPESVLKKRKRNEEWALAEK+GLEAAKKKNAENRKLI+NRAKLYA++YDEQQK+L+RLKREA+LKGGFYVDPEAKLLFIIRIRGINAID
Subjt:  MSGEGVKGGPVVPESVLKKRKRNEEWALAEKQGLEAAKKKNAENRKLIYNRAKLYAEKYDEQQKDLIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAID

Query:  PKTKKILQLLRLRQV
        PKTKKILQLLRLRQ+
Subjt:  PKTKKILQLLRLRQV

A0A6J1IG46 60S ribosomal protein L7-4-like1.3e-4991.3Show/hide
Query:  MSGEGVKGGPVVPESVLKKRKRNEEWALAEKQGLEAAKKKNAENRKLIYNRAKLYAEKYDEQQKDLIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAID
        MS EGVKGGPVVPESVLKKRKRNEEWALAEK+GLEAAKKKN ENRKLI+NRAKLYA++YDEQQK+L+RLKREA+LKGGFYVDPEAKLLFIIRIRGINAID
Subjt:  MSGEGVKGGPVVPESVLKKRKRNEEWALAEKQGLEAAKKKNAENRKLIYNRAKLYAEKYDEQQKDLIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAID

Query:  PKTKKILQLLRLRQV
        PKTKKILQLLRLRQ+
Subjt:  PKTKKILQLLRLRQV

SwissProt top hitse value%identityAlignment
P60039 60S ribosomal protein L7-39.5e-3779.05Show/hide
Query:  VVPESVLKKRKRNEEWALAEKQGLEAAKKKNAENRKLIYNRAKLYAEKYDEQQKDLIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLL
        VVPESVLKK KR EEWALA+K    AAKKK+ E RKLI+ RA+ YA++Y E+  +LIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLL
Subjt:  VVPESVLKKRKRNEEWALAEKQGLEAAKKKNAENRKLIYNRAKLYAEKYDEQQKDLIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLL

Query:  RLRQV
        RLRQ+
Subjt:  RLRQV

P60040 60S ribosomal protein L7-28.3e-4180Show/hide
Query:  VKGGPVVPESVLKKRKRNEEWALAEKQGLEAAKKKNAENRKLIYNRAKLYAEKYDEQQKDLIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKK
        V+   VVPESVLKKRKR EEWAL +KQ +EAAKKKNAENRKLI+ RA+ Y+++Y E++K+LI LKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKK
Subjt:  VKGGPVVPESVLKKRKRNEEWALAEKQGLEAAKKKNAENRKLIYNRAKLYAEKYDEQQKDLIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKK

Query:  ILQLLRLRQV
        ILQLLRLRQ+
Subjt:  ILQLLRLRQV

Q6C603 60S ribosomal protein L78.1e-2046.85Show/hide
Query:  KGGPVVPESVLKKRKRNEEWALAEKQGLEAAKKKNAENRKLIYNRAKLYAEKYDEQQKDLIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKI
        K   +VPE++LKKRK  ++   A++      K  NAE  K+I++RA+ Y ++Y E +++ IRL+REAKL G FYV  E KL+F+IRI+GI+ + PK +K+
Subjt:  KGGPVVPESVLKKRKRNEEWALAEKQGLEAAKKKNAENRKLIYNRAKLYAEKYDEQQKDLIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKI

Query:  LQLLRLRQVTH
        LQLLRL Q+ +
Subjt:  LQLLRLRQVTH

Q7SBD5 60S ribosomal protein L73.1e-1949.11Show/hide
Query:  KGGPVVPESVLKKRKRNEEWALAEKQG-LEAAKKKNAENRKLIYNRAKLYAEKYDEQQKDLIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKK
        K   +VPE++LKKRK ++E A AE+Q  +E  K  N E R +I+ RA+ Y ++Y + +++ IRL+R AK  G F++  EAKL+F+IRI+GIN I PK +K
Subjt:  KGGPVVPESVLKKRKRNEEWALAEKQG-LEAAKKKNAENRKLIYNRAKLYAEKYDEQQKDLIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKK

Query:  ILQLLRLRQVTH
        ILQLLRL Q+ +
Subjt:  ILQLLRLRQVTH

Q9LHP1 60S ribosomal protein L7-41.7e-4183.81Show/hide
Query:  VVPESVLKKRKRNEEWALAEKQGLEAAKKKNAENRKLIYNRAKLYAEKYDEQQKDLIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLL
        VVPESVLKKRKR EEWALA+KQ LEAAKK+NAE RKLI+NRAK Y+++Y E++++LI+LKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLL
Subjt:  VVPESVLKKRKRNEEWALAEKQGLEAAKKKNAENRKLIYNRAKLYAEKYDEQQKDLIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLL

Query:  RLRQV
        RLRQ+
Subjt:  RLRQV

Arabidopsis top hitse value%identityAlignment
AT2G01250.1 Ribosomal protein L30/L7 family protein5.9e-4280Show/hide
Query:  VKGGPVVPESVLKKRKRNEEWALAEKQGLEAAKKKNAENRKLIYNRAKLYAEKYDEQQKDLIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKK
        V+   VVPESVLKKRKR EEWAL +KQ +EAAKKKNAENRKLI+ RA+ Y+++Y E++K+LI LKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKK
Subjt:  VKGGPVVPESVLKKRKRNEEWALAEKQGLEAAKKKNAENRKLIYNRAKLYAEKYDEQQKDLIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKK

Query:  ILQLLRLRQV
        ILQLLRLRQ+
Subjt:  ILQLLRLRQV

AT2G01250.2 Ribosomal protein L30/L7 family protein5.9e-4280Show/hide
Query:  VKGGPVVPESVLKKRKRNEEWALAEKQGLEAAKKKNAENRKLIYNRAKLYAEKYDEQQKDLIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKK
        V+   VVPESVLKKRKR EEWAL +KQ +EAAKKKNAENRKLI+ RA+ Y+++Y E++K+LI LKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKK
Subjt:  VKGGPVVPESVLKKRKRNEEWALAEKQGLEAAKKKNAENRKLIYNRAKLYAEKYDEQQKDLIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKK

Query:  ILQLLRLRQV
        ILQLLRLRQ+
Subjt:  ILQLLRLRQV

AT3G13580.1 Ribosomal protein L30/L7 family protein1.2e-4283.81Show/hide
Query:  VVPESVLKKRKRNEEWALAEKQGLEAAKKKNAENRKLIYNRAKLYAEKYDEQQKDLIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLL
        VVPESVLKKRKR EEWALA+KQ LEAAKK+NAE RKLI+NRAK Y+++Y E++++LI+LKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLL
Subjt:  VVPESVLKKRKRNEEWALAEKQGLEAAKKKNAENRKLIYNRAKLYAEKYDEQQKDLIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLL

Query:  RLRQV
        RLRQ+
Subjt:  RLRQV

AT3G13580.2 Ribosomal protein L30/L7 family protein1.2e-4283.81Show/hide
Query:  VVPESVLKKRKRNEEWALAEKQGLEAAKKKNAENRKLIYNRAKLYAEKYDEQQKDLIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLL
        VVPESVLKKRKR EEWALA+KQ LEAAKK+NAE RKLI+NRAK Y+++Y E++++LI+LKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLL
Subjt:  VVPESVLKKRKRNEEWALAEKQGLEAAKKKNAENRKLIYNRAKLYAEKYDEQQKDLIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLL

Query:  RLRQV
        RLRQ+
Subjt:  RLRQV

AT3G13580.3 Ribosomal protein L30/L7 family protein1.2e-4283.81Show/hide
Query:  VVPESVLKKRKRNEEWALAEKQGLEAAKKKNAENRKLIYNRAKLYAEKYDEQQKDLIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLL
        VVPESVLKKRKR EEWALA+KQ LEAAKK+NAE RKLI+NRAK Y+++Y E++++LI+LKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLL
Subjt:  VVPESVLKKRKRNEEWALAEKQGLEAAKKKNAENRKLIYNRAKLYAEKYDEQQKDLIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLL

Query:  RLRQV
        RLRQ+
Subjt:  RLRQV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGACATGAGTGGGGAAGGAGTCAAGGGAGGCCCGGTGGTTCCGGAGTCCGTGTTGAAGAAGCGGAAGAGAAACGAAGAATGGGCCTTGGCTGAGAAACAAGGTCT
AGAGGCTGCGAAGAAGAAGAATGCTGAGAACAGAAAACTGATCTATAACAGGGCTAAACTCTATGCCGAAAAGTACGATGAACAGCAAAAGGATCTGATTCGCTTGAAGC
GCGAGGCTAAACTCAAGGGTGGATTTTATGTCGACCCTGAAGCCAAACTTCTGTTCATTATCAGGATCCGAGGTATCAATGCTATTGACCCAAAGACCAAGAAGATTCTG
CAGCTTCTGCGTTTGAGACAGGTAACACATTACTCCATCGATTTCATCTCGCAGACAATGAATTTATACAATTGTTTCAATTTAATCTCACCAAAGATGAATATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGACATGAGTGGGGAAGGAGTCAAGGGAGGCCCGGTGGTTCCGGAGTCCGTGTTGAAGAAGCGGAAGAGAAACGAAGAATGGGCCTTGGCTGAGAAACAAGGTCT
AGAGGCTGCGAAGAAGAAGAATGCTGAGAACAGAAAACTGATCTATAACAGGGCTAAACTCTATGCCGAAAAGTACGATGAACAGCAAAAGGATCTGATTCGCTTGAAGC
GCGAGGCTAAACTCAAGGGTGGATTTTATGTCGACCCTGAAGCCAAACTTCTGTTCATTATCAGGATCCGAGGTATCAATGCTATTGACCCAAAGACCAAGAAGATTCTG
CAGCTTCTGCGTTTGAGACAGGTAACACATTACTCCATCGATTTCATCTCGCAGACAATGAATTTATACAATTGTTTCAATTTAATCTCACCAAAGATGAATATTTAA
Protein sequenceShow/hide protein sequence
MEDMSGEGVKGGPVVPESVLKKRKRNEEWALAEKQGLEAAKKKNAENRKLIYNRAKLYAEKYDEQQKDLIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKIL
QLLRLRQVTHYSIDFISQTMNLYNCFNLISPKMNI