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Lsi06G012190 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G012190
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCyclin-dependent protein kinase inhibitor SMR6-like protein
Genome locationchr06:22567565..22567891
RNA-Seq ExpressionLsi06G012190
SyntenyLsi06G012190
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAV59718.1 hypothetical protein CFOL_v3_03249 [Cephalotus follicularis]2.4e-1045.05Show/hide
Query:  MGMEIFEEFQQLTP--------LSSLQFI--LPKEKTQQEQEQEQEQEECLTPTAAAARLKPTTVCPPAPKKPRPPRRKLNFQPPSFFEAPQDLNSLYFQ
        MG+E+ EEF+ +T         L+S  ++  +   K  QE      +EEC TP +A + L    VCPPAP K RPP+RKL   P  FFE P DL SL+F 
Subjt:  MGMEIFEEFQQLTP--------LSSLQFI--LPKEKTQQEQEQEQEQEECLTPTAAAARLKPTTVCPPAPKKPRPPRRKLNFQPPSFFEAPQDLNSLYFQ

Query:  LHIPSKKIKPI
        L+ PSKKI+PI
Subjt:  LHIPSKKIKPI

KAE8056731.1 hypothetical protein FH972_013476 [Carpinus fangiana]3.5e-0943.4Show/hide
Query:  MGMEIFEEFQQLTPLSSLQFILPKEKTQQEQEQEQEQE------ECLTPTAAAARLKPTTVCPPAPKKPRPPRRKLNFQPPSFFEAPQDLNSLYF-QLHI
        MG+EI EEF+ +TP+ ++          +  E E+ +E      EC TP ++   LK   VCPPAPKKPRP RRKL+  P   F+ P DL S+ F  L  
Subjt:  MGMEIFEEFQQLTPLSSLQFILPKEKTQQEQEQEQEQE------ECLTPTAAAARLKPTTVCPPAPKKPRPPRRKLNFQPPSFFEAPQDLNSLYF-QLHI

Query:  PSKKIK
        PSKKI+
Subjt:  PSKKIK

KAG6587720.1 hypothetical protein SDJN03_16285, partial [Cucurbita argyrosperma subsp. sororia]7.5e-2869.81Show/hide
Query:  MGMEIFEEFQQLTPL---SSLQFILPKEKTQQEQEQEQEQEECLTPTAAAARLKPTTVCPPAPKKPRPPRRKLNFQPPSFFEAPQDLNSLYFQLHIPSKK
        MGME+ +EF+ LTPL    SLQ  +PKE+      QEQ+ EEC TPTAA +RLKPT  CPPAPKKPRPPRRKLNFQPPSFF+APQDL S+YF+L  PSKK
Subjt:  MGMEIFEEFQQLTPL---SSLQFILPKEKTQQEQEQEQEQEECLTPTAAAARLKPTTVCPPAPKKPRPPRRKLNFQPPSFFEAPQDLNSLYFQLHIPSKK

Query:  IKPIST
        IKPIST
Subjt:  IKPIST

KAG6589677.1 hypothetical protein SDJN03_15100, partial [Cucurbita argyrosperma subsp. sororia]9.5e-3173.79Show/hide
Query:  MGMEIFEEFQQLTPLSSLQFILPKEKTQQEQEQEQEQEECLTPTAAAARLKPTTVCPPAPKKPRPPRRKLNFQPPSFFEAPQDLNSLYFQLHIPSKKIKP
        MGME+ EEF+ LTPL SL   LPKEK  Q     QEQE+C TPTAAA RLKPT VCPPAPKKPRPPRRKLNF PP FFEAPQDL+S+Y +L IPSKKIKP
Subjt:  MGMEIFEEFQQLTPLSSLQFILPKEKTQQEQEQEQEQEECLTPTAAAARLKPTTVCPPAPKKPRPPRRKLNFQPPSFFEAPQDLNSLYFQLHIPSKKIKP

Query:  IST
        I+T
Subjt:  IST

KGN65496.1 hypothetical protein Csa_019987 [Cucumis sativus]1.5e-3681.19Show/hide
Query:  MGMEIFEEFQQLTPLSSLQFILPKEKTQQEQEQEQEQEECLTPTAAAARLKPTTVCPPAPKKPRPPRRKLNFQPPSFFEAPQDLNSLYFQLHIPSKKIKP
        MGMEI +EF  LTPLSSLQFI+PK KT+Q+Q+++QE EECLTPTAAAARLKP  +CPPAPKKPRPPRRKLNF PP FFEAPQDLNS+YFQ HIPSKKIKP
Subjt:  MGMEIFEEFQQLTPLSSLQFILPKEKTQQEQEQEQEQEECLTPTAAAARLKPTTVCPPAPKKPRPPRRKLNFQPPSFFEAPQDLNSLYFQLHIPSKKIKP

Query:  I
        I
Subjt:  I

TrEMBL top hitse value%identityAlignment
A0A059CL15 Uncharacterized protein1.6e-0741.82Show/hide
Query:  MGMEIFEEFQQLTPL--------SSLQFILPKEKTQQEQEQEQEQEECLTPTAAAARLKPTT--VCPPAPKKPRPPRRKLNFQPP-SFFEAPQDLNSLYF
        MGM + EEF+  TP+        S L  + P E+ Q     + E +EC TP +    +   T   CPPAPKKPRPPRRK +  PP  FF+ P DL S++ 
Subjt:  MGMEIFEEFQQLTPL--------SSLQFILPKEKTQQEQEQEQEQEECLTPTAAAARLKPTT--VCPPAPKKPRPPRRKLNFQPP-SFFEAPQDLNSLYF

Query:  QLHIPSKKIK
         +  PSKKI+
Subjt:  QLHIPSKKIK

A0A0A0M005 Uncharacterized protein7.3e-3781.19Show/hide
Query:  MGMEIFEEFQQLTPLSSLQFILPKEKTQQEQEQEQEQEECLTPTAAAARLKPTTVCPPAPKKPRPPRRKLNFQPPSFFEAPQDLNSLYFQLHIPSKKIKP
        MGMEI +EF  LTPLSSLQFI+PK KT+Q+Q+++QE EECLTPTAAAARLKP  +CPPAPKKPRPPRRKLNF PP FFEAPQDLNS+YFQ HIPSKKIKP
Subjt:  MGMEIFEEFQQLTPLSSLQFILPKEKTQQEQEQEQEQEECLTPTAAAARLKPTTVCPPAPKKPRPPRRKLNFQPPSFFEAPQDLNSLYFQLHIPSKKIKP

Query:  I
        I
Subjt:  I

A0A151SX09 Uncharacterized protein3.5e-0742.27Show/hide
Query:  MGMEIFEEFQQLTPL-------SSLQFILPKEKTQQEQEQEQEQEECLTPTAAAARLKPTTVCPPAPKKPRPPRRKLNFQPPS--FFEAPQDLNSLY
        MG+EI EEF+ +TP+        +L+  L   K    ++ E E EEC TPT+ +  L+   VCPP PKKPR  R++  FQPPS  F   P DL S++
Subjt:  MGMEIFEEFQQLTPL-------SSLQFILPKEKTQQEQEQEQEQEECLTPTAAAARLKPTTVCPPAPKKPRPPRRKLNFQPPS--FFEAPQDLNSLY

A0A1Q3AVG9 Uncharacterized protein1.2e-1045.05Show/hide
Query:  MGMEIFEEFQQLTP--------LSSLQFI--LPKEKTQQEQEQEQEQEECLTPTAAAARLKPTTVCPPAPKKPRPPRRKLNFQPPSFFEAPQDLNSLYFQ
        MG+E+ EEF+ +T         L+S  ++  +   K  QE      +EEC TP +A + L    VCPPAP K RPP+RKL   P  FFE P DL SL+F 
Subjt:  MGMEIFEEFQQLTP--------LSSLQFI--LPKEKTQQEQEQEQEQEECLTPTAAAARLKPTTVCPPAPKKPRPPRRKLNFQPPSFFEAPQDLNSLYFQ

Query:  LHIPSKKIKPI
        L+ PSKKI+PI
Subjt:  LHIPSKKIKPI

A0A5N6R7V3 Uncharacterized protein1.7e-0943.4Show/hide
Query:  MGMEIFEEFQQLTPLSSLQFILPKEKTQQEQEQEQEQE------ECLTPTAAAARLKPTTVCPPAPKKPRPPRRKLNFQPPSFFEAPQDLNSLYF-QLHI
        MG+EI EEF+ +TP+ ++          +  E E+ +E      EC TP ++   LK   VCPPAPKKPRP RRKL+  P   F+ P DL S+ F  L  
Subjt:  MGMEIFEEFQQLTPLSSLQFILPKEKTQQEQEQEQEQE------ECLTPTAAAARLKPTTVCPPAPKKPRPPRRKLNFQPPSFFEAPQDLNSLYF-QLHI

Query:  PSKKIK
        PSKKI+
Subjt:  PSKKIK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTATGGAAATTTTTGAGGAATTCCAACAACTTACACCATTATCCTCTCTTCAATTCATCCTTCCCAAAGAAAAAACACAACAAGAACAAGAACAAGAACAGGAGCA
AGAAGAATGTCTCACCCCCACCGCCGCCGCCGCCCGCCTGAAGCCGACCACGGTCTGTCCGCCGGCGCCCAAGAAACCTCGTCCTCCACGAAGGAAATTGAACTTTCAGC
CACCTTCTTTCTTTGAAGCTCCACAAGATCTCAATTCTCTCTATTTTCAGCTTCATATTCCTTCCAAGAAAATCAAACCCATTTCTACTTCTTCTTTCCAACATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTATGGAAATTTTTGAGGAATTCCAACAACTTACACCATTATCCTCTCTTCAATTCATCCTTCCCAAAGAAAAAACACAACAAGAACAAGAACAAGAACAGGAGCA
AGAAGAATGTCTCACCCCCACCGCCGCCGCCGCCCGCCTGAAGCCGACCACGGTCTGTCCGCCGGCGCCCAAGAAACCTCGTCCTCCACGAAGGAAATTGAACTTTCAGC
CACCTTCTTTCTTTGAAGCTCCACAAGATCTCAATTCTCTCTATTTTCAGCTTCATATTCCTTCCAAGAAAATCAAACCCATTTCTACTTCTTCTTTCCAACATTAA
Protein sequenceShow/hide protein sequence
MGMEIFEEFQQLTPLSSLQFILPKEKTQQEQEQEQEQEECLTPTAAAARLKPTTVCPPAPKKPRPPRRKLNFQPPSFFEAPQDLNSLYFQLHIPSKKIKPISTSSFQH