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Lsi06G012260 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G012260
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionGlutaredoxin family protein
Genome locationchr06:22657763..22660317
RNA-Seq ExpressionLsi06G012260
SyntenyLsi06G012260
Gene Ontology termsGO:0034599 - cellular response to oxidative stress (biological process)
GO:0098869 - cellular oxidant detoxification (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0004362 - glutathione-disulfide reductase activity (molecular function)
GO:0008794 - arsenate reductase (glutaredoxin) activity (molecular function)
GO:0097573 - glutathione oxidoreductase activity (molecular function)
InterPro domainsIPR002109 - Glutaredoxin
IPR011767 - Glutaredoxin active site
IPR011899 - Glutaredoxin, eukaryotic/virial
IPR014025 - Glutaredoxin subgroup
IPR036249 - Thioredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146345.1 glutaredoxin-C4 [Cucumis sativus]4.9e-5594.35Show/hide
Query:  MAATVVTMRMRMRMIPTVCAMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKAVFKDLHKVPHVVELDQRDDGRAIQDALSALVGRHTVPQVFIDGK
        MAATVVT  MRMRMIPTV AMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAK VFKDL+KVPHVVELDQRDDG AIQDALSALVGRHTVPQVFIDGK
Subjt:  MAATVVTMRMRMRMIPTVCAMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKAVFKDLHKVPHVVELDQRDDGRAIQDALSALVGRHTVPQVFIDGK

Query:  HIGGSDDTVEAYESGELGKLLGIK
        HIGGSDDTVEAYESGELGKLLGI+
Subjt:  HIGGSDDTVEAYESGELGKLLGIK

XP_008453541.1 PREDICTED: glutaredoxin-C4-like [Cucumis melo]2.4e-5493.55Show/hide
Query:  MAATVVTMRMRMRMIPTVCAMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKAVFKDLHKVPHVVELDQRDDGRAIQDALSALVGRHTVPQVFIDGK
        MAATVVT  MRMRMIPTV AMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKAVFKDL+KVPHVVELDQRDDG AIQDALSALVGRH+VPQVFIDGK
Subjt:  MAATVVTMRMRMRMIPTVCAMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKAVFKDLHKVPHVVELDQRDDGRAIQDALSALVGRHTVPQVFIDGK

Query:  HIGGSDDTVEAYESGELGKLLGIK
        HIGGSDDTVEAYESGEL KLLGI+
Subjt:  HIGGSDDTVEAYESGELGKLLGIK

XP_022135442.1 glutaredoxin-C4 [Momordica charantia]4.3e-4374.81Show/hide
Query:  MAATVVTMRMRMRMIPTVCAM-------ASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKAVFKDLHKVPHVVELDQRDDGRAIQDALSALVGRHTVP
        MAATV   +M       +CAM       ASSSPESLFVKKTIASHQ VIFSKSYCPYC  AKAVF++L KVPHVVELD+RDDGR IQDA+  LVGRHTVP
Subjt:  MAATVVTMRMRMRMIPTVCAM-------ASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKAVFKDLHKVPHVVELDQRDDGRAIQDALSALVGRHTVP

Query:  QVFIDGKHIGGSDDTVEAYESGELGKLLGIK
        QVFIDGKHIGGSDDTV AYESG+L KLLGIK
Subjt:  QVFIDGKHIGGSDDTVEAYESGELGKLLGIK

XP_022921333.1 glutaredoxin-C4-like [Cucurbita moschata]6.8e-4986.29Show/hide
Query:  MAATVVTMRMRMRMIPTVCAMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKAVFKDLHKVPHVVELDQRDDGRAIQDALSALVGRHTVPQVFIDGK
        MAAT+      M     V AMASSSPESLFVKKTIASHQ+VIFSKSYCPYCETAKAVFKDL+KVPHVVELDQRDDG AIQDALSALVGR TVPQVFIDGK
Subjt:  MAATVVTMRMRMRMIPTVCAMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKAVFKDLHKVPHVVELDQRDDGRAIQDALSALVGRHTVPQVFIDGK

Query:  HIGGSDDTVEAYESGELGKLLGIK
        HIGGSDDTVEAYESGELGKLLGIK
Subjt:  HIGGSDDTVEAYESGELGKLLGIK

XP_038880247.1 glutaredoxin-C4-like [Benincasa hispida]8.0e-5086.29Show/hide
Query:  MAATVVTMRMRMRMIPTVCAMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKAVFKDLHKVPHVVELDQRDDGRAIQDALSALVGRHTVPQVFIDGK
        MAATVVT  ++MRMIPTV AMASSSPES FVKKTIASHQTVIFSKSYC YCE AKAVFKDLHKVP+VVELDQRDDG AIQDALSA VGRHTVPQV IDGK
Subjt:  MAATVVTMRMRMRMIPTVCAMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKAVFKDLHKVPHVVELDQRDDGRAIQDALSALVGRHTVPQVFIDGK

Query:  HIGGSDDTVEAYESGELGKLLGIK
        +I GSDD++EAY+SGELGKLLGIK
Subjt:  HIGGSDDTVEAYESGELGKLLGIK

TrEMBL top hitse value%identityAlignment
A0A0A0LUU4 Glutaredoxin domain-containing protein2.4e-5594.35Show/hide
Query:  MAATVVTMRMRMRMIPTVCAMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKAVFKDLHKVPHVVELDQRDDGRAIQDALSALVGRHTVPQVFIDGK
        MAATVVT  MRMRMIPTV AMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAK VFKDL+KVPHVVELDQRDDG AIQDALSALVGRHTVPQVFIDGK
Subjt:  MAATVVTMRMRMRMIPTVCAMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKAVFKDLHKVPHVVELDQRDDGRAIQDALSALVGRHTVPQVFIDGK

Query:  HIGGSDDTVEAYESGELGKLLGIK
        HIGGSDDTVEAYESGELGKLLGI+
Subjt:  HIGGSDDTVEAYESGELGKLLGIK

A0A1S3BVX6 glutaredoxin-C4-like1.2e-5493.55Show/hide
Query:  MAATVVTMRMRMRMIPTVCAMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKAVFKDLHKVPHVVELDQRDDGRAIQDALSALVGRHTVPQVFIDGK
        MAATVVT  MRMRMIPTV AMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKAVFKDL+KVPHVVELDQRDDG AIQDALSALVGRH+VPQVFIDGK
Subjt:  MAATVVTMRMRMRMIPTVCAMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKAVFKDLHKVPHVVELDQRDDGRAIQDALSALVGRHTVPQVFIDGK

Query:  HIGGSDDTVEAYESGELGKLLGIK
        HIGGSDDTVEAYESGEL KLLGI+
Subjt:  HIGGSDDTVEAYESGELGKLLGIK

A0A6J1C2Q1 glutaredoxin-C42.1e-4374.81Show/hide
Query:  MAATVVTMRMRMRMIPTVCAM-------ASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKAVFKDLHKVPHVVELDQRDDGRAIQDALSALVGRHTVP
        MAATV   +M       +CAM       ASSSPESLFVKKTIASHQ VIFSKSYCPYC  AKAVF++L KVPHVVELD+RDDGR IQDA+  LVGRHTVP
Subjt:  MAATVVTMRMRMRMIPTVCAM-------ASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKAVFKDLHKVPHVVELDQRDDGRAIQDALSALVGRHTVP

Query:  QVFIDGKHIGGSDDTVEAYESGELGKLLGIK
        QVFIDGKHIGGSDDTV AYESG+L KLLGIK
Subjt:  QVFIDGKHIGGSDDTVEAYESGELGKLLGIK

A0A6J1E3M7 glutaredoxin-C4-like3.3e-4986.29Show/hide
Query:  MAATVVTMRMRMRMIPTVCAMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKAVFKDLHKVPHVVELDQRDDGRAIQDALSALVGRHTVPQVFIDGK
        MAAT+      M     V AMASSSPESLFVKKTIASHQ+VIFSKSYCPYCETAKAVFKDL+KVPHVVELDQRDDG AIQDALSALVGR TVPQVFIDGK
Subjt:  MAATVVTMRMRMRMIPTVCAMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKAVFKDLHKVPHVVELDQRDDGRAIQDALSALVGRHTVPQVFIDGK

Query:  HIGGSDDTVEAYESGELGKLLGIK
        HIGGSDDTVEAYESGELGKLLGIK
Subjt:  HIGGSDDTVEAYESGELGKLLGIK

A0A6J1JJ74 glutaredoxin-C4-like3.3e-4986.29Show/hide
Query:  MAATVVTMRMRMRMIPTVCAMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKAVFKDLHKVPHVVELDQRDDGRAIQDALSALVGRHTVPQVFIDGK
        MAAT+      M     V AMASSSPESLFVKKTIASHQ+VIFSKSYCPYCETAKAVFKDL+KVPHVVELDQRDDG AIQDALSALVGR TVPQVFIDGK
Subjt:  MAATVVTMRMRMRMIPTVCAMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKAVFKDLHKVPHVVELDQRDDGRAIQDALSALVGRHTVPQVFIDGK

Query:  HIGGSDDTVEAYESGELGKLLGIK
        HIGGSDDTVEAYESGELGKLLGIK
Subjt:  HIGGSDDTVEAYESGELGKLLGIK

SwissProt top hitse value%identityAlignment
B7ZFT1 Glutaredoxin-11.2e-1946.15Show/hide
Query:  VKKTIASHQTVIFSKSYCPYCETAKAVFKDLHKVPHVVELDQRDDGRAIQDALSALVGRHTVPQVFIDGKHIGGSDDTVEAYESGELGKLL
        V+K I ++  ++FSKS+CPYC+ AKA  K+L+  P + ELD+  +GRAIQD L     ++TVP +FI G+H+GG DD + A ++G L K++
Subjt:  VKKTIASHQTVIFSKSYCPYCETAKAVFKDLHKVPHVVELDQRDDGRAIQDALSALVGRHTVPQVFIDGKHIGGSDDTVEAYESGELGKLL

Q0DAE4 Glutaredoxin-C82.2e-3467.92Show/hide
Query:  AMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKAVFKDLH--KVPHVVELDQRDDGRAIQDALSALVGRHTVPQVFIDGKHIGGSDDTVEAYESGEL
        A + ++ +S FVK T+ +H  VIFSKSYCPYC  AKAVFK+L   K P+VVELDQR+DG  IQDALS +VGR TVPQVF+ GKH+GGSDDTVEAYESG+L
Subjt:  AMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKAVFKDLH--KVPHVVELDQRDDGRAIQDALSALVGRHTVPQVFIDGKHIGGSDDTVEAYESGEL

Query:  GKLLGI
         KLL I
Subjt:  GKLLGI

Q6H628 Monothiol glutaredoxin-S61.2e-2758.25Show/hide
Query:  AMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKAVFKDLHKVPHVVELDQRDDGRAIQDALSALVGRHTVPQVFIDGKHIGGSDDTVEAYESGELGK
        A A+ SP S FV+  I S++  IFSK+YCPY   AK +F+DL + P++VELD R+DGR IQ  L  LVGRHTVPQVF++G+H+GGSDDT  A+ +G+L K
Subjt:  AMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKAVFKDLHKVPHVVELDQRDDGRAIQDALSALVGRHTVPQVFIDGKHIGGSDDTVEAYESGELGK

Query:  LLG
        LLG
Subjt:  LLG

Q8LFQ6 Glutaredoxin-C41.2e-3764.46Show/hide
Query:  VTMRMRMRMIPTVCAM---ASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKAVFKDLHKVPHVVELDQRDDGRAIQDALSALVGRHTVPQVFIDGKHI
        ++M M +  + T  +M   A+SSPE+ FVKKTI+SH+ VIFSKSYCPYC+ AK+VF++L +VP+VVELD+R+DG +IQ AL  +VGR TVPQVFI+GKH+
Subjt:  VTMRMRMRMIPTVCAM---ASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKAVFKDLHKVPHVVELDQRDDGRAIQDALSALVGRHTVPQVFIDGKHI

Query:  GGSDDTVEAYESGELGKLLGI
        GGSDDTV+AYESGEL KLLG+
Subjt:  GGSDDTVEAYESGELGKLLGI

Q9FVX1 Glutaredoxin-C31.9e-2561.7Show/hide
Query:  SLFVKKTIASHQTVIFSKSYCPYCETAKAVFKDLHKVPHVVELDQRDDGRAIQDALSALVGRHTVPQVFIDGKHIGGSDDTVEAYESGELGKLL
        S FV+  I S++ VIFSKSYCPYC  +K +F  L + P VVELDQR+DG  IQ  L   VGR TVPQVF++GKHIGGSDD   A ESG+L KLL
Subjt:  SLFVKKTIASHQTVIFSKSYCPYCETAKAVFKDLHKVPHVVELDQRDDGRAIQDALSALVGRHTVPQVFIDGKHIGGSDDTVEAYESGELGKLL

Arabidopsis top hitse value%identityAlignment
AT1G77370.1 Glutaredoxin family protein1.3e-2661.7Show/hide
Query:  SLFVKKTIASHQTVIFSKSYCPYCETAKAVFKDLHKVPHVVELDQRDDGRAIQDALSALVGRHTVPQVFIDGKHIGGSDDTVEAYESGELGKLL
        S FV+  I S++ VIFSKSYCPYC  +K +F  L + P VVELDQR+DG  IQ  L   VGR TVPQVF++GKHIGGSDD   A ESG+L KLL
Subjt:  SLFVKKTIASHQTVIFSKSYCPYCETAKAVFKDLHKVPHVVELDQRDDGRAIQDALSALVGRHTVPQVFIDGKHIGGSDDTVEAYESGELGKLL

AT2G20270.1 Thioredoxin superfamily protein2.3e-1840.87Show/hide
Query:  MRMRMIPTVCAMASSSPESL--FVKKTIASHQTVIFSKSYCPYCETAKAVFKDLHKVPHVVELDQ-RDDGRAIQDALSALVGRHTVPQVFIDGKHIGGSD
        +R   +  + + +SSS  +L   VK T+A +  V++SK++C Y    K++FK L   P VVELDQ   +G  +Q+ L  + G++TVP VFI GKHIGG  
Subjt:  MRMRMIPTVCAMASSSPESL--FVKKTIASHQTVIFSKSYCPYCETAKAVFKDLHKVPHVVELDQ-RDDGRAIQDALSALVGRHTVPQVFIDGKHIGGSD

Query:  DTVEAYESGELGKLL
        DT++ +  GEL  +L
Subjt:  DTVEAYESGELGKLL

AT4G28730.1 Glutaredoxin family protein8.6e-1843.36Show/hide
Query:  TVCAMASSSPESLF-------VKKTIASHQTVIFSKSYCPYCETAKAVFKDLHKVPHVVELDQ-RDDGRAIQDALSALVGRHTVPQVFIDGKHIGGSDDT
        T  + A+SS  S F       ++KT+  +  VI+SK++C YC   K +FK L   P VVELDQ    G  +Q  L  L G+HTVP VF+ GKHIGG  DT
Subjt:  TVCAMASSSPESLF-------VKKTIASHQTVIFSKSYCPYCETAKAVFKDLHKVPHVVELDQ-RDDGRAIQDALSALVGRHTVPQVFIDGKHIGGSDDT

Query:  VEAYESGELGKLL
        V+    G+L  +L
Subjt:  VEAYESGELGKLL

AT5G20500.1 Glutaredoxin family protein8.9e-3964.46Show/hide
Query:  VTMRMRMRMIPTVCAM---ASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKAVFKDLHKVPHVVELDQRDDGRAIQDALSALVGRHTVPQVFIDGKHI
        ++M M +  + T  +M   A+SSPE+ FVKKTI+SH+ VIFSKSYCPYC+ AK+VF++L +VP+VVELD+R+DG +IQ AL  +VGR TVPQVFI+GKH+
Subjt:  VTMRMRMRMIPTVCAM---ASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKAVFKDLHKVPHVVELDQRDDGRAIQDALSALVGRHTVPQVFIDGKHI

Query:  GGSDDTVEAYESGELGKLLGI
        GGSDDTV+AYESGEL KLLG+
Subjt:  GGSDDTVEAYESGELGKLLGI

AT5G63030.1 Thioredoxin superfamily protein1.6e-1644.44Show/hide
Query:  KKTIASHQTVIFSKSYCPYCETAKAVFKDLHKVPHVVELDQRDDGRAIQDALSALVGRHTVPQVFIDGKHIGGSDDTVEAYESGELGKLL
        K+ ++++  V+FSK+YC YC+  K +   L     V+ELD+  DG  IQ ALS   G+ TVP VFI G HIGG D  +E  + G+L  LL
Subjt:  KKTIASHQTVIFSKSYCPYCETAKAVFKDLHKVPHVVELDQRDDGRAIQDALSALVGRHTVPQVFIDGKHIGGSDDTVEAYESGELGKLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCGACGGTGGTGACGATGAGGATGAGGATGAGGATGATACCGACGGTGTGCGCCATGGCTTCATCTTCCCCAGAATCCCTCTTCGTCAAGAAAACCATCGCCTC
CCACCAGACCGTCATCTTCTCCAAGTCCTATTGCCCGTATTGCGAAACAGCAAAAGCTGTTTTCAAGGATTTGCACAAAGTTCCTCATGTTGTTGAGCTAGATCAAAGGG
ATGATGGCAGAGCCATTCAAGATGCTCTTAGTGCACTTGTTGGAAGGCACACTGTACCTCAAGTGTTCATAGATGGAAAACACATAGGTGGATCAGATGATACTGTTGAA
GCATATGAGAGTGGAGAGTTGGGTAAACTTCTGGGTATTAAGTAA
mRNA sequenceShow/hide mRNA sequence
TATTACTATAATAATTTTTAAGAACATGGTTACGAGTGACTGTATGATAATTGATACATTATTTCATACAATATTGCTATAATAATTTTTTTTTTTAAAAAAAAATCAAT
TGTTTAGCATAATTCAACAAACTTATTGAAAAAGAAAAAAAGGTCAACAGTTAAGTTGACTGAAGTCCAAATTTAATCGCCGACGGTAGCAGCCTTATCGAGTAAAGGTT
AGTTGCAGTCGAGAAAATTGTATCGTATCAATGGCAGCGACGGTGGTGACGATGAGGATGAGGATGAGGATGATACCGACGGTGTGCGCCATGGCTTCATCTTCCCCAGA
ATCCCTCTTCGTCAAGAAAACCATCGCCTCCCACCAGACCGTCATCTTCTCCAAGTCCTATTGCCCGTATTGCGAAACAGCAAAAGCTGTTTTCAAGGATTTGCACAAAG
TTCCTCATGTTGTTGAGCTAGATCAAAGGGATGATGGCAGAGCCATTCAAGATGCTCTTAGTGCACTTGTTGGAAGGCACACTGTACCTCAAGTGTTCATAGATGGAAAA
CACATAGGTGGATCAGATGATACTGTTGAAGCATATGAGAGTGGAGAGTTGGGTAAACTTCTGGGTATTAAGTAATAGAACAAAGTCGATCTCTGAAATCATACCTTCAA
TTGTAAGCAGATATCTTTGCACATACAGAGTGTATTTTGCTTGAATCAACTGCTTATTAATTGTATTCCTTAATGTGAAGGATAAATTGATGACTGTTAAACACTACAAC
ATACTATTTTGTCTTGAAAATAGTTCTACCAAAAAAATTATTCAATGTGAATTCGAAAATCTACATGTTCCT
Protein sequenceShow/hide protein sequence
MAATVVTMRMRMRMIPTVCAMASSSPESLFVKKTIASHQTVIFSKSYCPYCETAKAVFKDLHKVPHVVELDQRDDGRAIQDALSALVGRHTVPQVFIDGKHIGGSDDTVE
AYESGELGKLLGIK