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Lsi06G012280 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G012280
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr06:22665066..22666932
RNA-Seq ExpressionLsi06G012280
SyntenyLsi06G012280
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589671.1 hypothetical protein SDJN03_15094, partial [Cucurbita argyrosperma subsp. sororia]3.2e-3475Show/hide
Query:  MRSSHFLFFCLLFTVFYLLSVDRFHSPPQLFAFKGTPARKYLGTSFSNPKSEYQRVKVHEDEFNSLSAKDISSNTPEYEASIHSSSELVYHTDYHGVTTH
        M SSHFLFF LLF +FYLLSV R  SPP      G PARKYLG+SFSNP+SE+ +VKVHEDEFN  SAKDISSN PEYEASI    ELVYH DYHGVTTH
Subjt:  MRSSHFLFFCLLFTVFYLLSVDRFHSPPQLFAFKGTPARKYLGTSFSNPKSEYQRVKVHEDEFNSLSAKDISSNTPEYEASIHSSSELVYHTDYHGVTTH

Query:  PNPTPKHP
        PNPTPKHP
Subjt:  PNPTPKHP

KGN65505.1 hypothetical protein Csa_019778 [Cucumis sativus]4.6e-3372.22Show/hide
Query:  MRSSHFLFFCLLFTVFYLLSVDRFHSPPQLFAFKGTPARKYLGTSFSNPKSEYQRVKVHEDEFNSLSAKDISSNTPEYEASIHSSSELVYHTDYHGVTTH
        MRSSHF+FFCLLFT FYL S+D  HSPP LF  +G  ARKYLGTSFS+        +VHEDEFN  S KD SSNTPEYEASI+S  ELVYH DYHGVTTH
Subjt:  MRSSHFLFFCLLFTVFYLLSVDRFHSPPQLFAFKGTPARKYLGTSFSNPKSEYQRVKVHEDEFNSLSAKDISSNTPEYEASIHSSSELVYHTDYHGVTTH

Query:  PNPTPKHP
        PNPTPKHP
Subjt:  PNPTPKHP

XP_022921360.1 uncharacterized protein LOC111429652 [Cucurbita moschata]9.2e-3474.07Show/hide
Query:  MRSSHFLFFCLLFTVFYLLSVDRFHSPPQLFAFKGTPARKYLGTSFSNPKSEYQRVKVHEDEFNSLSAKDISSNTPEYEASIHSSSELVYHTDYHGVTTH
        M SSHFLFF LLF +FYLLSV R  SPP      G PARKYLG+SFSNP+SE+ +V+VHEDEFN  SAKDISSN PEYEASI    ELVYH DYHGVTTH
Subjt:  MRSSHFLFFCLLFTVFYLLSVDRFHSPPQLFAFKGTPARKYLGTSFSNPKSEYQRVKVHEDEFNSLSAKDISSNTPEYEASIHSSSELVYHTDYHGVTTH

Query:  PNPTPKHP
        PNPTPKHP
Subjt:  PNPTPKHP

XP_022987350.1 uncharacterized protein LOC111484929 [Cucurbita maxima]2.3e-3272.22Show/hide
Query:  MRSSHFLFFCLLFTVFYLLSVDRFHSPPQLFAFKGTPARKYLGTSFSNPKSEYQRVKVHEDEFNSLSAKDISSNTPEYEASIHSSSELVYHTDYHGVTTH
        M SSHFLFF LLF +FYLLSV R  SPP      G PARKYLG+ FSNP+SE+ +V+VHEDE N  SAKDISSN PEYEASI    ELVYH DYHGVTTH
Subjt:  MRSSHFLFFCLLFTVFYLLSVDRFHSPPQLFAFKGTPARKYLGTSFSNPKSEYQRVKVHEDEFNSLSAKDISSNTPEYEASIHSSSELVYHTDYHGVTTH

Query:  PNPTPKHP
        PNPTPKHP
Subjt:  PNPTPKHP

XP_023515382.1 uncharacterized protein LOC111779554 [Cucurbita pepo subsp. pepo]7.0e-3473.15Show/hide
Query:  MRSSHFLFFCLLFTVFYLLSVDRFHSPPQLFAFKGTPARKYLGTSFSNPKSEYQRVKVHEDEFNSLSAKDISSNTPEYEASIHSSSELVYHTDYHGVTTH
        M SSHFLFF LLF +FYLLSV R  SPP    + G PARKYLG+SFSNP+SE+ +V+VH+DEFN  SAKDISSN PEYEASI    ELVYH DYHGVTTH
Subjt:  MRSSHFLFFCLLFTVFYLLSVDRFHSPPQLFAFKGTPARKYLGTSFSNPKSEYQRVKVHEDEFNSLSAKDISSNTPEYEASIHSSSELVYHTDYHGVTTH

Query:  PNPTPKHP
        PNPTPKHP
Subjt:  PNPTPKHP

TrEMBL top hitse value%identityAlignment
A0A0A0LUD6 Uncharacterized protein2.2e-3372.22Show/hide
Query:  MRSSHFLFFCLLFTVFYLLSVDRFHSPPQLFAFKGTPARKYLGTSFSNPKSEYQRVKVHEDEFNSLSAKDISSNTPEYEASIHSSSELVYHTDYHGVTTH
        MRSSHF+FFCLLFT FYL S+D  HSPP LF  +G  ARKYLGTSFS+        +VHEDEFN  S KD SSNTPEYEASI+S  ELVYH DYHGVTTH
Subjt:  MRSSHFLFFCLLFTVFYLLSVDRFHSPPQLFAFKGTPARKYLGTSFSNPKSEYQRVKVHEDEFNSLSAKDISSNTPEYEASIHSSSELVYHTDYHGVTTH

Query:  PNPTPKHP
        PNPTPKHP
Subjt:  PNPTPKHP

A0A438CZ59 Uncharacterized protein9.0e-1141.44Show/hide
Query:  MRSSHFLFFCLLFTVFYLLSVDRFHSPPQLFAFKGTPARKY---LGTSFSNPKSEYQRVKVHEDEFNSLSAKDISSNTPEYEASIHSSSELVYHTDYHGV
        M+SS  L  CLL T FYLL      +     +    P R++   L  SFSN K+EYQ ++  +DE    + ++  S   E+ +S  +  E+VYH DYHGV
Subjt:  MRSSHFLFFCLLFTVFYLLSVDRFHSPPQLFAFKGTPARKY---LGTSFSNPKSEYQRVKVHEDEFNSLSAKDISSNTPEYEASIHSSSELVYHTDYHGV

Query:  TTHPNPTPKHP
         THP PTPKHP
Subjt:  TTHPNPTPKHP

A0A5D3DYI5 Uncharacterized protein1.4e-2774.16Show/hide
Query:  VDRFHSPPQLFAFKGTPARKYLGTSFSN-PKSEYQRVKVHEDEFNSLSAKDISSNTPEYEASIHSSSELVYHTDYHGVTTHPNPTPKHP
        +D  HSPP+LF  +G PARKYLGTSFSN PKSEY   +VHEDEFN  S KD+SSNTPE+EASI+S  EL+YH DYHGVTTHPNPTPKHP
Subjt:  VDRFHSPPQLFAFKGTPARKYLGTSFSN-PKSEYQRVKVHEDEFNSLSAKDISSNTPEYEASIHSSSELVYHTDYHGVTTHPNPTPKHP

A0A6J1E5F1 uncharacterized protein LOC1114296524.4e-3474.07Show/hide
Query:  MRSSHFLFFCLLFTVFYLLSVDRFHSPPQLFAFKGTPARKYLGTSFSNPKSEYQRVKVHEDEFNSLSAKDISSNTPEYEASIHSSSELVYHTDYHGVTTH
        M SSHFLFF LLF +FYLLSV R  SPP      G PARKYLG+SFSNP+SE+ +V+VHEDEFN  SAKDISSN PEYEASI    ELVYH DYHGVTTH
Subjt:  MRSSHFLFFCLLFTVFYLLSVDRFHSPPQLFAFKGTPARKYLGTSFSNPKSEYQRVKVHEDEFNSLSAKDISSNTPEYEASIHSSSELVYHTDYHGVTTH

Query:  PNPTPKHP
        PNPTPKHP
Subjt:  PNPTPKHP

A0A6J1JGL7 uncharacterized protein LOC1114849291.1e-3272.22Show/hide
Query:  MRSSHFLFFCLLFTVFYLLSVDRFHSPPQLFAFKGTPARKYLGTSFSNPKSEYQRVKVHEDEFNSLSAKDISSNTPEYEASIHSSSELVYHTDYHGVTTH
        M SSHFLFF LLF +FYLLSV R  SPP      G PARKYLG+ FSNP+SE+ +V+VHEDE N  SAKDISSN PEYEASI    ELVYH DYHGVTTH
Subjt:  MRSSHFLFFCLLFTVFYLLSVDRFHSPPQLFAFKGTPARKYLGTSFSNPKSEYQRVKVHEDEFNSLSAKDISSNTPEYEASIHSSSELVYHTDYHGVTTH

Query:  PNPTPKHP
        PNPTPKHP
Subjt:  PNPTPKHP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGATCCTCACATTTTCTTTTCTTTTGCCTTCTCTTTACTGTCTTCTACCTTCTTTCAGTGGATCGTTTCCATTCTCCACCTCAACTTTTCGCCTTCAAAGGAACACC
TGCAAGAAAGTACCTTGGTACATCATTTTCCAATCCCAAATCTGAATACCAGAGAGTCAAGGTTCATGAAGATGAGTTCAATAGCCTGTCTGCAAAAGATATTTCATCCA
ACACGCCTGAATATGAAGCAAGTATCCACAGTTCGAGTGAACTTGTATACCACACCGACTATCATGGAGTGACAACGCATCCAAACCCAACGCCTAAACATCCATAG
mRNA sequenceShow/hide mRNA sequence
CTGCCATGGACCAATAATTGATTTTCCCTCTCTCTCTCTCTCTCTAACTCCCCAAAGGAGTATGCATAAAAAGCTTCCTCTATATAATGCTGCAAACCTATCTCTTTCCA
TCCCAAGATAACCTGATCTTTATTTGAGCAGATAAAGTCAGGAAATGAGATCCTCACATTTTCTTTTCTTTTGCCTTCTCTTTACTGTCTTCTACCTTCTTTCAGTGGAT
CGTTTCCATTCTCCACCTCAACTTTTCGCCTTCAAAGGAACACCTGCAAGAAAGTACCTTGGTACATCATTTTCCAATCCCAAATCTGAATACCAGAGAGTCAAGGTTCA
TGAAGATGAGTTCAATAGCCTGTCTGCAAAAGATATTTCATCCAACACGCCTGAATATGAAGCAAGTATCCACAGTTCGAGTGAACTTGTATACCACACCGACTATCATG
GAGTGACAACGCATCCAAACCCAACGCCTAAACATCCATAGCCATAGGCAACATATCAACTTTTAAGATGAAATGAACTATTCGTACATGTACTGCACTTCAAATACTCT
CATTTGTTTCACAATCTATCAAATGCTCTTTTTTTATCATGCTATACAATTATATACAAGGTGCATCCTTGCCCCGAAATCAGCACCCAGTAGTAATAGGCTCCTTAGCC
TCTTAAATTTTCATATACCAGAGAACCACCATTGCAGATAAGTCAGACTTAGGCGCTTACTTGAGCTTGCAACTTGCCAAAATATACGTGGTGAACCTGAATTCCTTGAA
ATAGGAAGTGTGGTTGGGAAAGAACCAGACACATTAATCAATCATAATTCAATGCAAAGAAATCATTCCTGTCGTATATTGACTTCTGACCTTTCTAAACCTCTCGAGCA
ACTTTTTGTAGCACTCCACAGTATTCTCAAATCGAACTTCACTACAAAATCTGGATTTTACCTCCACAAATGTAGTTTCTACCTTTTCTCGATTATTAACACAAGTAGAT
AACAGATCTCTGATACCAATTGAAGGCATGGTCCATTTATTTTCTTTGACACTTACTTCATCTACGTTGAGAAGTCTGAGCCATCTCATCCGATGAAAGGGGTCTTCGTC
TTTCTCAACTGAAATTTTTATAGCAGCAAGCACTTCCAAGAATTTTGACTCTCTACTGATTTTATCTATCAATCTACTGAAAGTAGTCCTCTGGTTCAGGTCAAGCCTAT
TATTGGTGTCTGAGGGCAAAAAACTTGCTGCTACCAAGCAAGCCCTTCGAAAGTTATGATCAGAGACACTAATTAACCAAATTGCAAACTGCAACAGTTCTACCGACAAA
GTTCCAAACAAAGTATCATATTGCTTCGGGTTATGATTCCAATTCCAACAATAGACAGCAGTATGAACAAATCCTTCCCACCTGAGGTAGGACAAAAGGGTCAGAACAGA
GTAAATAAAAGATAAATTTAGACTAGTCAATTTACTCCAATCCTTGGGGATTTTAAGTTTCAAGAAACTTTATTTAAGTTACAGAATAGAGACTTCAAACAATTCACTAA
ATATAGAGAGCTGAGAGATTTCGATGTTCATTGAAGTGGTGGTCTACAAGACAACAGTCATCTTATTCTGTACGTGATTTGAAAAAAATCATTCTACCAACCCAAGCCAG
CTACAATTTCAGAAAAATGTCATAGAACCAATAAAAGTTTTGGCATAAAACCGTG
Protein sequenceShow/hide protein sequence
MRSSHFLFFCLLFTVFYLLSVDRFHSPPQLFAFKGTPARKYLGTSFSNPKSEYQRVKVHEDEFNSLSAKDISSNTPEYEASIHSSSELVYHTDYHGVTTHPNPTPKHP