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Lsi06G012300 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G012300
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionClavata3/ESR (CLE) gene family member
Genome locationchr06:22699409..22699708
RNA-Seq ExpressionLsi06G012300
SyntenyLsi06G012300
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058189.1 Clavata3/ESR (CLE) protein [Cucumis melo var. makuwa]4.9e-3476.42Show/hide
Query:  MGLAKSSILVLWLSILVVCVSSVAGARKTLFLAHGGIRDNKNNLTT--ALKTINRCKYLKN----IHCCECFFLSSKKMMMI--NNNVTNFEEKRVVPTG
        MGL+KSSILV WLS+LVVCV+SVAGARK LFL H G+RDNKN+LTT     TINRCKY KN    +HCCECFFLSSKKMMM+  NNN TNFE+KRVVPTG
Subjt:  MGLAKSSILVLWLSILVVCVSSVAGARKTLFLAHGGIRDNKNNLTT--ALKTINRCKYLKN----IHCCECFFLSSKKMMMI--NNNVTNFEEKRVVPTG

Query:  PNPLHN
        PNPLHN
Subjt:  PNPLHN

KAG6587715.1 hypothetical protein SDJN03_16280, partial [Cucurbita argyrosperma subsp. sororia]5.3e-2063.64Show/hide
Query:  MGLAKSSILVLWLSILVVCVSSVAGARKTLFLAHGGIRDNKNNLTTALKTINRCKYLKNIHCCECFFLSSKKMMMINNNVTNFEEKRVVPTGPNPLHNK
        M LA+SSILVL LS+  VC+ SV GARK LFLA    RDN N+LT A+++  RCK  K ++CCECFF SS+K  MINN  ++ EEKRVVPTGPNPLHNK
Subjt:  MGLAKSSILVLWLSILVVCVSSVAGARKTLFLAHGGIRDNKNNLTTALKTINRCKYLKNIHCCECFFLSSKKMMMINNNVTNFEEKRVVPTGPNPLHNK

KGN65507.1 hypothetical protein Csa_019832 [Cucumis sativus]1.2e-3579.25Show/hide
Query:  MGLAKSSILVLWLSILVVCVSSVAGARKTLFLAHGGIRDNKNNLTTAL--KTINRCKYLKN-----IHCCECFFLSSKKMMMI-NNNVTNFEEKRVVPTG
        MGL+KSSIL+ WLS+LVVCV+SVAGARKTLFL H G+RDNKN+LTT L   TINRCKY KN     +HCCECFFLSSKKMMMI NNN TNFEEKRVVPTG
Subjt:  MGLAKSSILVLWLSILVVCVSSVAGARKTLFLAHGGIRDNKNNLTTAL--KTINRCKYLKN-----IHCCECFFLSSKKMMMI-NNNVTNFEEKRVVPTG

Query:  PNPLHN
        PNPLHN
Subjt:  PNPLHN

XP_023003872.1 putative receptor-like protein kinase At4g00960 [Cucurbita maxima]1.1e-0954.76Show/hide
Query:  KSSILVLWLSILVVCVSSVAGARKTLFLAHGGIRDNKNNLTTALKTINRCKYLKNIHCCECFFLSSKKMMMINNNVTNFEEKRV
        +SSILVL LS+  VC+ SV GARK LFLA    RDN N+LT A++   RCK  K ++CC CFF SS+K   INN  ++ EEKR+
Subjt:  KSSILVLWLSILVVCVSSVAGARKTLFLAHGGIRDNKNNLTTALKTINRCKYLKNIHCCECFFLSSKKMMMINNNVTNFEEKRV

TrEMBL top hitse value%identityAlignment
A0A0A0LXI1 Uncharacterized protein5.7e-3679.25Show/hide
Query:  MGLAKSSILVLWLSILVVCVSSVAGARKTLFLAHGGIRDNKNNLTTAL--KTINRCKYLKN-----IHCCECFFLSSKKMMMI-NNNVTNFEEKRVVPTG
        MGL+KSSIL+ WLS+LVVCV+SVAGARKTLFL H G+RDNKN+LTT L   TINRCKY KN     +HCCECFFLSSKKMMMI NNN TNFEEKRVVPTG
Subjt:  MGLAKSSILVLWLSILVVCVSSVAGARKTLFLAHGGIRDNKNNLTTAL--KTINRCKYLKN-----IHCCECFFLSSKKMMMI-NNNVTNFEEKRVVPTG

Query:  PNPLHN
        PNPLHN
Subjt:  PNPLHN

A0A5A7UXE2 Clavata3/ESR (CLE) gene family member2.4e-3476.42Show/hide
Query:  MGLAKSSILVLWLSILVVCVSSVAGARKTLFLAHGGIRDNKNNLTT--ALKTINRCKYLKN----IHCCECFFLSSKKMMMI--NNNVTNFEEKRVVPTG
        MGL+KSSILV WLS+LVVCV+SVAGARK LFL H G+RDNKN+LTT     TINRCKY KN    +HCCECFFLSSKKMMM+  NNN TNFE+KRVVPTG
Subjt:  MGLAKSSILVLWLSILVVCVSSVAGARKTLFLAHGGIRDNKNNLTT--ALKTINRCKYLKN----IHCCECFFLSSKKMMMI--NNNVTNFEEKRVVPTG

Query:  PNPLHN
        PNPLHN
Subjt:  PNPLHN

A0A6J1KNU3 putative receptor-like protein kinase At4g009605.4e-1054.76Show/hide
Query:  KSSILVLWLSILVVCVSSVAGARKTLFLAHGGIRDNKNNLTTALKTINRCKYLKNIHCCECFFLSSKKMMMINNNVTNFEEKRV
        +SSILVL LS+  VC+ SV GARK LFLA    RDN N+LT A++   RCK  K ++CC CFF SS+K   INN  ++ EEKR+
Subjt:  KSSILVLWLSILVVCVSSVAGARKTLFLAHGGIRDNKNNLTTALKTINRCKYLKNIHCCECFFLSSKKMMMINNNVTNFEEKRV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACTAGCTAAGTCTAGCATTTTGGTACTTTGGCTTTCGATTTTAGTCGTTTGCGTTAGCTCCGTTGCGGGAGCTCGGAAGACGTTGTTTTTGGCTCATGGTGGTAT
CAGAGACAACAAAAACAACTTGACGACTGCACTGAAGACAATCAACAGATGCAAGTACTTGAAGAACATCCATTGTTGTGAGTGCTTCTTCTTGAGCTCTAAGAAGATGA
TGATGATCAATAATAATGTCACCAATTTTGAAGAGAAAAGGGTTGTTCCTACTGGCCCTAACCCACTTCACAATAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGACTAGCTAAGTCTAGCATTTTGGTACTTTGGCTTTCGATTTTAGTCGTTTGCGTTAGCTCCGTTGCGGGAGCTCGGAAGACGTTGTTTTTGGCTCATGGTGGTAT
CAGAGACAACAAAAACAACTTGACGACTGCACTGAAGACAATCAACAGATGCAAGTACTTGAAGAACATCCATTGTTGTGAGTGCTTCTTCTTGAGCTCTAAGAAGATGA
TGATGATCAATAATAATGTCACCAATTTTGAAGAGAAAAGGGTTGTTCCTACTGGCCCTAACCCACTTCACAATAAGTAG
Protein sequenceShow/hide protein sequence
MGLAKSSILVLWLSILVVCVSSVAGARKTLFLAHGGIRDNKNNLTTALKTINRCKYLKNIHCCECFFLSSKKMMMINNNVTNFEEKRVVPTGPNPLHNK