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Lsi06G012440 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G012440
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPre T-cell antigen receptor alpha
Genome locationchr06:22979495..22981724
RNA-Seq ExpressionLsi06G012440
SyntenyLsi06G012440
Gene Ontology termsGO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4262008.1 unnamed protein product [Prunus armeniaca]4.9e-2384.13Show/hide
Query:  MGGGMEANKNRFIEDWGSARENLEHNFRWTRRNFAIVGLFGIAIPLLVYKGIVREFVISFLSI
        MGGGMEANKN+FIE+WGSARENLEHNFRWTRRNFA+VG+FGIAIP+LVYKGIVR+F I+FL +
Subjt:  MGGGMEANKNRFIEDWGSARENLEHNFRWTRRNFAIVGLFGIAIPLLVYKGIVREFVISFLSI

KAA0058164.1 Pre T-cell antigen receptor alpha [Cucumis melo var. makuwa]1.3e-2385.07Show/hide
Query:  MGGGMEANKNRFIEDWGSARENLEHNFRWTRRNFAIVGLFGIAIPLLVYKGIVREFVISFLSIFFFL
        MGGGM A+KN+FIEDW +ARENLE+NFRWTRRN AIVG+FGIA+P LVYKGIVREFVISFLSIFFFL
Subjt:  MGGGMEANKNRFIEDWGSARENLEHNFRWTRRNFAIVGLFGIAIPLLVYKGIVREFVISFLSIFFFL

KAG7023344.1 hypothetical protein SDJN02_14369, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-2489.23Show/hide
Query:  MGGGMEANKNRFIEDWGSARENLEHNFRWTRRNFAIVGLFGIAIPLLVYKGIVREFVISFLSIFF
        MGGGMEA+KN+FIEDW SARENLEHNFRWTRRNFA+VGLFGIA+PLLVYKGIVREFVISFLS  F
Subjt:  MGGGMEANKNRFIEDWGSARENLEHNFRWTRRNFAIVGLFGIAIPLLVYKGIVREFVISFLSIFF

KZM96549.1 hypothetical protein DCAR_019791 [Daucus carota subsp. sativus]8.4e-2385.94Show/hide
Query:  MGGGMEANKNRFIEDWGSARENLEHNFRWTRRNFAIVGLFGIAIPLLVYKGIVREFVISFLSIF
        MGGGMEANKNR+IE+WGSARENLEHNFRWTRRNFA+VG+FGIAIP+LVYKGIV+EFVIS L  F
Subjt:  MGGGMEANKNRFIEDWGSARENLEHNFRWTRRNFAIVGLFGIAIPLLVYKGIVREFVISFLSIF

XP_018808459.1 uncharacterized protein LOC108981675 [Juglans regia]1.1e-2292.86Show/hide
Query:  MGGGMEANKNRFIEDWGSARENLEHNFRWTRRNFAIVGLFGIAIPLLVYKGIVREF
        MGGGMEANKNRFIEDWGSARENLEHNFRWTRRNFA+VGLFG+A+P+LVYKGIVREF
Subjt:  MGGGMEANKNRFIEDWGSARENLEHNFRWTRRNFAIVGLFGIAIPLLVYKGIVREF

TrEMBL top hitse value%identityAlignment
A0A164ZX19 Uncharacterized protein4.1e-2385.94Show/hide
Query:  MGGGMEANKNRFIEDWGSARENLEHNFRWTRRNFAIVGLFGIAIPLLVYKGIVREFVISFLSIF
        MGGGMEANKNR+IE+WGSARENLEHNFRWTRRNFA+VG+FGIAIP+LVYKGIV+EFVIS L  F
Subjt:  MGGGMEANKNRFIEDWGSARENLEHNFRWTRRNFAIVGLFGIAIPLLVYKGIVREFVISFLSIF

A0A1U8LFU4 uncharacterized protein LOC1079270185.3e-2394.64Show/hide
Query:  MGGGMEANKNRFIEDWGSARENLEHNFRWTRRNFAIVGLFGIAIPLLVYKGIVREF
        MGGGMEANKNRFIEDWGSARENLEHNFRWTRRNFA+VG+FGIAIP+LVYKGIVREF
Subjt:  MGGGMEANKNRFIEDWGSARENLEHNFRWTRRNFAIVGLFGIAIPLLVYKGIVREF

A0A5D2LQ41 Uncharacterized protein5.3e-2394.64Show/hide
Query:  MGGGMEANKNRFIEDWGSARENLEHNFRWTRRNFAIVGLFGIAIPLLVYKGIVREF
        MGGGMEANKNRFIEDWGSARENLEHNFRWTRRNFA+VG+FGIAIP+LVYKGIVREF
Subjt:  MGGGMEANKNRFIEDWGSARENLEHNFRWTRRNFAIVGLFGIAIPLLVYKGIVREF

A0A5D3DYW3 Pre T-cell antigen receptor alpha6.3e-2485.07Show/hide
Query:  MGGGMEANKNRFIEDWGSARENLEHNFRWTRRNFAIVGLFGIAIPLLVYKGIVREFVISFLSIFFFL
        MGGGM A+KN+FIEDW +ARENLE+NFRWTRRN AIVG+FGIA+P LVYKGIVREFVISFLSIFFFL
Subjt:  MGGGMEANKNRFIEDWGSARENLEHNFRWTRRNFAIVGLFGIAIPLLVYKGIVREFVISFLSIFFFL

A0A6J5TH47 Uncharacterized protein2.4e-2384.13Show/hide
Query:  MGGGMEANKNRFIEDWGSARENLEHNFRWTRRNFAIVGLFGIAIPLLVYKGIVREFVISFLSI
        MGGGMEANKN+FIE+WGSARENLEHNFRWTRRNFA+VG+FGIAIP+LVYKGIVR+F I+FL +
Subjt:  MGGGMEANKNRFIEDWGSARENLEHNFRWTRRNFAIVGLFGIAIPLLVYKGIVREFVISFLSI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G31490.1 unknown protein9.5e-2582.14Show/hide
Query:  MGGGMEANKNRFIEDWGSARENLEHNFRWTRRNFAIVGLFGIAIPLLVYKGIVREF
        MGGGME NKN+FIEDWGSARENLEHNFRWTRRNFA++G+FGIA+P++VYKGIV++F
Subjt:  MGGGMEANKNRFIEDWGSARENLEHNFRWTRRNFAIVGLFGIAIPLLVYKGIVREF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCGGAGGAATGGAAGCTAACAAGAACAGATTTATTGAGGATTGGGGTAGTGCTAGAGAAAATCTTGAGCATAACTTCCGCTGGACTCGCCGGAATTTCGCTATTGT
GGGTCTCTTCGGCATCGCCATTCCCCTCCTTGTTTACAAGGGCATCGTCAGAGAATTTGTAATTTCATTTCTCTCGATCTTTTTCTTTCTTAACATATGCAAGATGAAGA
TGCAGGCAGACCGTACCGAAAGTTTTTTTGAGCACGGCACCAGGCGCTGCAATAATTTCATGGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCGGAGGAATGGAAGCTAACAAGAACAGATTTATTGAGGATTGGGGTAGTGCTAGAGAAAATCTTGAGCATAACTTCCGCTGGACTCGCCGGAATTTCGCTATTGT
GGGTCTCTTCGGCATCGCCATTCCCCTCCTTGTTTACAAGGGCATCGTCAGAGAATTTGTAATTTCATTTCTCTCGATCTTTTTCTTTCTTAACATATGCAAGATGAAGA
TGCAGGCAGACCGTACCGAAAGTTTTTTTGAGCACGGCACCAGGCGCTGCAATAATTTCATGGAGTAATAAAACCTTTCTTATCTATGTGAACATCCCAATTTGGATTCA
GGAACAATATTGCATCTTTCTTTGAAGTTGTAGAAGTGATGCTATGCAAGTTTACACTGTATTTTATGACATTTTGTGAATGCGGAGTATTTTCAGTCTGAAGTCCTGCC
TTTCAAATTTATCATGAATATAGACCATTTTTGTTTTTGTTTTTGTTCTTTTTCTTAGCATGGGGTGCTTGAATTATCACCAGTTGTTAAAATGGCTCAAGAATGACATA
GCTTTAATTGTGACAACTGGTTATAAACTCATACAAGATGATAGGTGGTAAATTGTTATTTATATATTGCTTGTTCAGAAAATAGGGTATATTGTTGCCTTTTCTTGTTG
AATCTAGAAACAGAGGCTATGTTTAGGAATCCATTTCTTAAGCACCAAACCGTATGATTTCCTAAATATGGCTCTTTCCCAAATAGGGTGATAAGAAACGAAAACAGGAG
AAGTTAAGGGTTGG
Protein sequenceShow/hide protein sequence
MGGGMEANKNRFIEDWGSARENLEHNFRWTRRNFAIVGLFGIAIPLLVYKGIVREFVISFLSIFFFLNICKMKMQADRTESFFEHGTRRCNNFME