; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi06G012490 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G012490
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr06:23077952..23080571
RNA-Seq ExpressionLsi06G012490
SyntenyLsi06G012490
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646115.1 hypothetical protein Csa_016498 [Cucumis sativus]6.1e-1548.12Show/hide
Query:  KRAYASLNNESSGEGDYSDTESENDAPPTKKPRNFEGKKFLTETTPNFLAI----------AAFARTTAANAHAAASIARKAASIALCTDHANAADPAAD
        ++A AS  NES  EGDYS T+S++DA PTK+P+N +GKK +TE TPNF A            + AR  A  A + AS+AR  AS ALC D ANAA  AAD
Subjt:  KRAYASLNNESSGEGDYSDTESENDAPPTKKPRNFEGKKFLTETTPNFLAI----------AAFARTTAANAHAAASIARKAASIALCTDHANAADPAAD

Query:  AADAADAAADAAAAAADVIAKFADIVDIATDRVAAN----NHNEAVNDSEALCNL-CNHP
        AADAA   AD A          AD VD AT+ +AA     +H +AV+D EA   L  NHP
Subjt:  AADAADAAADAAAAAADVIAKFADIVDIATDRVAAN----NHNEAVNDSEALCNL-CNHP

XP_031744842.1 uncharacterized protein LOC105436127 isoform X1 [Cucumis sativus]1.2e-2344.31Show/hide
Query:  MGKEKRENKRRASARLQVAGSPSVKNPEKQTTPIHLGSNEETQVSNRDVVSTTNTKDTMLGGTQVVVKRAYASLNNESSGEGDYSDTESENDAPPTKKPR
        MGKEKRENKRR SAR+QVA +P +K  EKQT  IH  SNE+                            A AS  NES  EGDYS T+S++DA PTK+P+
Subjt:  MGKEKRENKRRASARLQVAGSPSVKNPEKQTTPIHLGSNEETQVSNRDVVSTTNTKDTMLGGTQVVVKRAYASLNNESSGEGDYSDTESENDAPPTKKPR

Query:  NFEGKKFLTETTPNFLAI----------AAFARTTAANAHAAASIARKAASIALCTDHANAADPAADAAD-AADAAADAAAAAADVIAKFADIVDIATDR
        N +GKK +TE TPNF A            + AR  A  A + AS+AR  AS ALC D ANAA  AADAA   AD AADA   A + IA            
Subjt:  NFEGKKFLTETTPNFLAI----------AAFARTTAANAHAAASIARKAASIALCTDHANAADPAADAAD-AADAAADAAAAAADVIAKFADIVDIATDR

Query:  VAANNHNEAVNDSEALCNL-CNHPSGYFAALRTAVLNALTAISKATRSILVAQGA
        +AA +H +AV+D EA   L  NHP  Y+AAL TA   A  A   A  +   A G+
Subjt:  VAANNHNEAVNDSEALCNL-CNHPSGYFAALRTAVLNALTAISKATRSILVAQGA

XP_031744843.1 uncharacterized protein LOC105436127 isoform X2 [Cucumis sativus]1.8e-1447.83Show/hide
Query:  ESSGEGDYSDTESENDAPPTKKPRNFEGKKFLTETTPNFLAI----------AAFARTTAANAHAAASIARKAASIALCTDHANAADPAADAADAADAAA
        E     DYS T+S++DA PTK+P+N EGKK LTE T NF A           A+ AR  A  A   AS+AR  AS ALC D ANAA  AADAADAA   A
Subjt:  ESSGEGDYSDTESENDAPPTKKPRNFEGKKFLTETTPNFLAI----------AAFARTTAANAHAAASIARKAASIALCTDHANAADPAADAADAADAAA

Query:  DAAAAAADVIAKFADIVDIATDRVAAN----NHNEAVNDSEALCNL-CNHPSGYFAALRTAVLNALTAISKATRSILVAQGAAK
        D A          AD VD ATD +AA     +H +AV+D EA   L  NHP  Y+AAL TA+ +A  A S A RS      AAK
Subjt:  DAAAAAADVIAKFADIVDIATDRVAAN----NHNEAVNDSEALCNL-CNHPSGYFAALRTAVLNALTAISKATRSILVAQGAAK

XP_031744844.1 uncharacterized protein LOC116405174 [Cucumis sativus]1.4e-1447.83Show/hide
Query:  ESSGEGDYSDTESENDAPPTKKPRNFEGKKFLTETTPNFLAI----------AAFARTTAANAHAAASIARKAASIALCTDHANAADPAADAADAADAAA
        E     DYS T+S++DA PTK+P+N EGKK LTE T NF A           A+ AR +A  A   AS+AR  AS ALC D ANAA  AADAADAA   A
Subjt:  ESSGEGDYSDTESENDAPPTKKPRNFEGKKFLTETTPNFLAI----------AAFARTTAANAHAAASIARKAASIALCTDHANAADPAADAADAADAAA

Query:  DAAAAAADVIAKFADIVDIATDRVAAN----NHNEAVNDSEALCNL-CNHPSGYFAALRTAVLNALTAISKATRSILVAQGAAK
        D A          AD VD ATD +AA     +H +AV+D EA   L  NHP  Y+AAL TA+ +A  A S A RS      AAK
Subjt:  DAAAAAADVIAKFADIVDIATDRVAAN----NHNEAVNDSEALCNL-CNHPSGYFAALRTAVLNALTAISKATRSILVAQGAAK

XP_031745079.1 uncharacterized protein LOC105436255 [Cucumis sativus]5.5e-1648.5Show/hide
Query:  KRAYASLNNESSGEGDYSDTESENDAPPTKKPRNFEGKKFLTETTPNFLAI----------AAFARTTAANAHAAASIARKAASIALCTDHANAADPAAD
        ++A AS  NES  EGDYS T+S++DA PTK+P+N +GKK +TE TPNF A            + AR  A  A + AS+AR  AS ALC D ANAA  AAD
Subjt:  KRAYASLNNESSGEGDYSDTESENDAPPTKKPRNFEGKKFLTETTPNFLAI----------AAFARTTAANAHAAASIARKAASIALCTDHANAADPAAD

Query:  AADAADAAADAAAAAADVIAKFADIVDIATDRVAAN----NHNEAVNDSEALCNL-CNHPSGYFAAL
        AADAA   AD A          AD VD AT+ +AA     +H +AV+D EA   L  NHP  Y+AAL
Subjt:  AADAADAAADAAAAAADVIAKFADIVDIATDRVAAN----NHNEAVNDSEALCNL-CNHPSGYFAAL

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAAGAAAAGAGGGAGAATAAAAGAAGAGCAAGTGCAAGGTTGCAAGTAGCAGGGTCCCCCTCGGTAAAGAATCCTGAGAAACAGACAACGCCCATCCATTTGGG
AAGCAATGAGGAGACACAAGTCTCAAATAGAGACGTAGTGAGCACAACAAACACCAAGGATACCATGCTTGGGGGAACACAAGTGGTTGTAAAGAGGGCATATGCAAGTT
TGAACAATGAAAGTTCCGGTGAGGGGGACTATTCTGACACGGAGTCTGAAAATGATGCACCTCCAACAAAGAAACCAAGGAATTTTGAGGGGAAAAAGTTTCTCACGGAA
ACTACTCCCAACTTTCTTGCCATTGCTGCCTTCGCCCGCACCACTGCCGCCAATGCACATGCTGCTGCTTCCATTGCTCGTAAGGCTGCTTCTATTGCCCTCTGCACTGA
CCACGCCAATGCTGCTGATCCTGCTGCTGATGCTGCTGATGCTGCTGACGCTGCTGCTGACGCTGCTGCTGCTGCTGCTGATGTCATTGCAAAATTTGCTGACATTGTCG
ATATTGCAACTGATCGCGTTGCCGCTAATAATCACAATGAAGCTGTCAATGATTCTGAAGCTCTCTGCAATTTATGTAACCACCCCTCTGGCTATTTCGCTGCTCTCCGT
ACCGCTGTTTTGAATGCCCTTACTGCCATTTCAAAAGCCACAAGATCTATACTAGTTGCCCAGGGGGCCGCAAAGGTCTGCTCATTCTCCAGCTATCATTGCCAGCATCA
ATGCCAAAAAAAGCCATAG
mRNA sequenceShow/hide mRNA sequence
TTTCTCTCCGACATCTTCAACTTCGGTTGGCTCCTCTTCCCTCACCATTGCAGCATCTCCAATTTCGCGATGGGAAAAGAAAAGAGGGAGAATAAAAGAAGAGCAAGTGC
AAGGTTGCAAGTAGCAGGGTCCCCCTCGGTAAAGAATCCTGAGAAACAGACAACGCCCATCCATTTGGGAAGCAATGAGGAGACACAAGTCTCAAATAGAGACGTAGTGA
GCACAACAAACACCAAGGATACCATGCTTGGGGGAACACAAGTGGTTGTAAAGAGGGCATATGCAAGTTTGAACAATGAAAGTTCCGGTGAGGGGGACTATTCTGACACG
GAGTCTGAAAATGATGCACCTCCAACAAAGAAACCAAGGAATTTTGAGGGGAAAAAGTTTCTCACGGAAACTACTCCCAACTTTCTTGCCATTGCTGCCTTCGCCCGCAC
CACTGCCGCCAATGCACATGCTGCTGCTTCCATTGCTCGTAAGGCTGCTTCTATTGCCCTCTGCACTGACCACGCCAATGCTGCTGATCCTGCTGCTGATGCTGCTGATG
CTGCTGACGCTGCTGCTGACGCTGCTGCTGCTGCTGCTGATGTCATTGCAAAATTTGCTGACATTGTCGATATTGCAACTGATCGCGTTGCCGCTAATAATCACAATGAA
GCTGTCAATGATTCTGAAGCTCTCTGCAATTTATGTAACCACCCCTCTGGCTATTTCGCTGCTCTCCGTACCGCTGTTTTGAATGCCCTTACTGCCATTTCAAAAGCCAC
AAGATCTATACTAGTTGCCCAGGGGGCCGCAAAGGTCTGCTCATTCTCCAGCTATCATTGCCAGCATCAATGCCAAAAAAAGCCATAG
Protein sequenceShow/hide protein sequence
MGKEKRENKRRASARLQVAGSPSVKNPEKQTTPIHLGSNEETQVSNRDVVSTTNTKDTMLGGTQVVVKRAYASLNNESSGEGDYSDTESENDAPPTKKPRNFEGKKFLTE
TTPNFLAIAAFARTTAANAHAAASIARKAASIALCTDHANAADPAADAADAADAAADAAAAAADVIAKFADIVDIATDRVAANNHNEAVNDSEALCNLCNHPSGYFAALR
TAVLNALTAISKATRSILVAQGAAKVCSFSSYHCQHQCQKKP