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Lsi06G012670 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G012670
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPollen preferential protein
Genome locationchr06:23248468..23248923
RNA-Seq ExpressionLsi06G012670
SyntenyLsi06G012670
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058153.1 hypothetical protein E6C27_scaffold274G004700 [Cucumis melo var. makuwa]7.2e-6180.82Show/hide
Query:  MARKVLLRSPAMRHRSPLKDEKIDAPREKRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQRKAASMDFT
        M RKVLLRS A+RHRS L+D KIDAP+E+RQFAEVAGGSAAECTA+CCCCPWTVLNI+IF++YRMPAGLCRKA+N+RKRHR+MK+KYLIQQRKA +MDFT
Subjt:  MARKVLLRSPAMRHRSPLKDEKIDAPREKRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQRKAASMDFT

Query:  DGSVGPATESFEAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSS
        DGSVGP  +SF  H+ TNDVAD EDLKKLEEEMWGRF+QTGFWR+S
Subjt:  DGSVGPATESFEAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSS

KGN63891.1 hypothetical protein Csa_014343 [Cucumis sativus]1.0e-6280.79Show/hide
Query:  MARKVLLRSPAMRHRSPLKDEKIDAPREKRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQRKAASMDFT
        M RKVLLRS A+RHRSPL+D KIDAPRE+RQFAEVAGGSAAECTA+CCCCPWTVLNI+IFA+YRMPAGLCRKA+N+RKRHR+MK+KYLIQQRKAAS DFT
Subjt:  MARKVLLRSPAMRHRSPLKDEKIDAPREKRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQRKAASMDFT

Query:  DGSVGPATESFEAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSSSQRHE
        DGSVGP  + +  H+  NDVA  EDLKKLE+EMWGRF+QTGFWRSSSQRH+
Subjt:  DGSVGPATESFEAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSSSQRHE

TYK28512.1 hypothetical protein E5676_scaffold629G001510 [Cucumis melo var. makuwa]5.5e-6181.51Show/hide
Query:  MARKVLLRSPAMRHRSPLKDEKIDAPREKRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQRKAASMDFT
        M RKVLLRS A+RHRS L+D KIDAP+E+RQFAEVAGGSAAECTA+CCCCPWTVLNI IFA+YRMPAGLCRKA+N+RKRHR+MK+KYLIQQRKA +MDFT
Subjt:  MARKVLLRSPAMRHRSPLKDEKIDAPREKRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQRKAASMDFT

Query:  DGSVGPATESFEAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSS
        DGSVGP  +SF  H+ TNDVAD EDLKKLEEEMWGRF+QTGFWR+S
Subjt:  DGSVGPATESFEAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSS

XP_022933995.1 uncharacterized protein LOC111441234 [Cucurbita moschata]5.4e-5676.32Show/hide
Query:  MARKVLLRSPAM-RHRSPLKDEKIDAPREKRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQRKAASMDF
        MARKVLLRS A+ R  S  K EK DA R+KRQFAE+AGGSAA+CT ICCCCPWTV+N+VIFAVYRMP GLCRKAMN+RKRHR++K+K LIQQRKAAS +F
Subjt:  MARKVLLRSPAM-RHRSPLKDEKIDAPREKRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQRKAASMDF

Query:  TDGSVGPATESFEAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSSSQRHE
         D SV PA ESFEA K  ND A  ED+ KLEEEMWGRFNQTGFWRSSSQRHE
Subjt:  TDGSVGPATESFEAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSSSQRHE

XP_038879203.1 uncharacterized protein LOC120071168 [Benincasa hispida]1.1e-6688.82Show/hide
Query:  MARKVLLRSPAMRHRSPLKDEKIDAPREKRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQRKAASMDFT
        M RKVLLRSPAMRH S   DEKIDAP+E+RQFAEVAGGSAAECTAICCCCPWTV+NIVIFAVYRMPAGLCRKAMN+RKRHRKMKKK LIQQRKA SMDFT
Subjt:  MARKVLLRSPAMRHRSPLKDEKIDAPREKRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQRKAASMDFT

Query:  DGSVG-PATESFEAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSSSQRHE
        DGSVG P  ES EAHK  NDVADVEDLKKLEEEMWGRFNQTGFWRSSSQRHE
Subjt:  DGSVG-PATESFEAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSSSQRHE

TrEMBL top hitse value%identityAlignment
A0A0A0LV48 Uncharacterized protein4.9e-6380.79Show/hide
Query:  MARKVLLRSPAMRHRSPLKDEKIDAPREKRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQRKAASMDFT
        M RKVLLRS A+RHRSPL+D KIDAPRE+RQFAEVAGGSAAECTA+CCCCPWTVLNI+IFA+YRMPAGLCRKA+N+RKRHR+MK+KYLIQQRKAAS DFT
Subjt:  MARKVLLRSPAMRHRSPLKDEKIDAPREKRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQRKAASMDFT

Query:  DGSVGPATESFEAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSSSQRHE
        DGSVGP  + +  H+  NDVA  EDLKKLE+EMWGRF+QTGFWRSSSQRH+
Subjt:  DGSVGPATESFEAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSSSQRHE

A0A5A7UQK6 Uncharacterized protein3.5e-6180.82Show/hide
Query:  MARKVLLRSPAMRHRSPLKDEKIDAPREKRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQRKAASMDFT
        M RKVLLRS A+RHRS L+D KIDAP+E+RQFAEVAGGSAAECTA+CCCCPWTVLNI+IF++YRMPAGLCRKA+N+RKRHR+MK+KYLIQQRKA +MDFT
Subjt:  MARKVLLRSPAMRHRSPLKDEKIDAPREKRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQRKAASMDFT

Query:  DGSVGPATESFEAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSS
        DGSVGP  +SF  H+ TNDVAD EDLKKLEEEMWGRF+QTGFWR+S
Subjt:  DGSVGPATESFEAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSS

A0A5D3DY75 Uncharacterized protein2.7e-6181.51Show/hide
Query:  MARKVLLRSPAMRHRSPLKDEKIDAPREKRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQRKAASMDFT
        M RKVLLRS A+RHRS L+D KIDAP+E+RQFAEVAGGSAAECTA+CCCCPWTVLNI IFA+YRMPAGLCRKA+N+RKRHR+MK+KYLIQQRKA +MDFT
Subjt:  MARKVLLRSPAMRHRSPLKDEKIDAPREKRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQRKAASMDFT

Query:  DGSVGPATESFEAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSS
        DGSVGP  +SF  H+ TNDVAD EDLKKLEEEMWGRF+QTGFWR+S
Subjt:  DGSVGPATESFEAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSS

A0A6J1BZB0 uncharacterized protein LOC1110069721.1e-4668.39Show/hide
Query:  MARKVLLRSPAMRH-RSPLKDEKIDAPREKRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQRKAASMDF
        M  KVLLRSPA+ H +S LKDEK+DAPRE+RQFAEVAGGSAAECTAICCCCP TV+NIVIFA+Y+MPAGLCRKA+  RKRH KMKKK LIQQR+ AS +F
Subjt:  MARKVLLRSPAMRH-RSPLKDEKIDAPREKRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQRKAASMDF

Query:  TDGSVGP-ATESFEAHKTTNDVAD-----VEDLKKLEEEMWGRFNQTGFWRSSSQ
        TDGS GP     F+        A+      +DL  LEEEMWG+F+QTGFWRSSSQ
Subjt:  TDGSVGP-ATESFEAHKTTNDVAD-----VEDLKKLEEEMWGRFNQTGFWRSSSQ

A0A6J1F6E1 uncharacterized protein LOC1114412342.6e-5676.32Show/hide
Query:  MARKVLLRSPAM-RHRSPLKDEKIDAPREKRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQRKAASMDF
        MARKVLLRS A+ R  S  K EK DA R+KRQFAE+AGGSAA+CT ICCCCPWTV+N+VIFAVYRMP GLCRKAMN+RKRHR++K+K LIQQRKAAS +F
Subjt:  MARKVLLRSPAM-RHRSPLKDEKIDAPREKRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQRKAASMDF

Query:  TDGSVGPATESFEAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSSSQRHE
         D SV PA ESFEA K  ND A  ED+ KLEEEMWGRFNQTGFWRSSSQRHE
Subjt:  TDGSVGPATESFEAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSSSQRHE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G27180.1 unknown protein2.8e-1834.34Show/hide
Query:  MARKVLLRSP--------AMRHRSPLKDEKIDAPREKRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQR
        M R V+L+SP         MR+  P         +E+R+  EVAGG+AAEC A+ CCCP  V+N+++ AVY++PA +C+KA  + KR R  +K++ +   
Subjt:  MARKVLLRSP--------AMRHRSPLKDEKIDAPREKRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQR

Query:  KAASMDFTDGSVGPATESFEAHKTTNDV---------ADVEDLKKLEEEMWGRFNQTGFWRSSSQR
          A     +GS             T ++          ++ D+ +LE EM  RF   GFWRS SQ+
Subjt:  KAASMDFTDGSVGPATESFEAHKTTNDV---------ADVEDLKKLEEEMWGRFNQTGFWRSSSQR

AT3G11690.1 unknown protein7.1e-1429.59Show/hide
Query:  RSPLKDEKIDAPREKRQF-----AEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAMNKRKR-----------------HRKMKKKYLIQQR
        R PL    + +P  +        AE  GG+ A C A+ CCCP  ++N+++ A+Y++P G+CR+A+  R+R                 + +M++ +   + 
Subjt:  RSPLKDEKIDAPREKRQF-----AEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAMNKRKR-----------------HRKMKKKYLIQQR

Query:  KAASMDFTDGSVGPATESFEAHK----------TTNDVADVED--LKKLEEEMWGRFNQTGFWRSSSQR
            +D  D S     ++F   K          TT +  D +D  +  LE+EMW RF   GFWRS SQR
Subjt:  KAASMDFTDGSVGPATESFEAHK----------TTNDVADVED--LKKLEEEMWGRFNQTGFWRSSSQR

AT5G06380.1 unknown protein3.4e-1638.79Show/hide
Query:  AEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQRKAASMDFTDGSVGPATESFEAHKTTNDVADVEDLKKLEEE
        AE  GG+ A C A+C C P +V+N+V+ AVY++P GLCR+A+ + +R R  KK+++   R+      +  +V P     E  +   +  + E +  LE+E
Subjt:  AEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQRKAASMDFTDGSVGPATESFEAHKTTNDVADVEDLKKLEEE

Query:  MWGRFNQTGFWRSSSQ
        MW RF   GFWRS SQ
Subjt:  MWGRFNQTGFWRSSSQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCGGAAGGTCCTCCTCCGATCTCCGGCTATGCGTCATAGATCGCCGCTGAAAGACGAGAAAATCGATGCGCCACGAGAGAAACGGCAGTTCGCGGAGGTAGCTGG
TGGTTCAGCGGCAGAATGTACGGCGATTTGCTGCTGTTGTCCATGGACGGTGTTGAATATCGTGATCTTTGCCGTCTACCGGATGCCGGCGGGGCTCTGCCGGAAAGCGA
TGAACAAAAGAAAACGACACCGTAAAATGAAGAAAAAATATCTCATTCAGCAACGAAAGGCCGCCTCTATGGATTTCACAGATGGATCGGTGGGGCCCGCAACGGAGAGT
TTTGAGGCCCACAAAACGACGAATGACGTGGCAGATGTCGAAGATTTGAAGAAGTTAGAAGAGGAAATGTGGGGCCGGTTCAACCAGACCGGGTTTTGGAGAAGTTCTTC
TCAAAGACATGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCGGAAGGTCCTCCTCCGATCTCCGGCTATGCGTCATAGATCGCCGCTGAAAGACGAGAAAATCGATGCGCCACGAGAGAAACGGCAGTTCGCGGAGGTAGCTGG
TGGTTCAGCGGCAGAATGTACGGCGATTTGCTGCTGTTGTCCATGGACGGTGTTGAATATCGTGATCTTTGCCGTCTACCGGATGCCGGCGGGGCTCTGCCGGAAAGCGA
TGAACAAAAGAAAACGACACCGTAAAATGAAGAAAAAATATCTCATTCAGCAACGAAAGGCCGCCTCTATGGATTTCACAGATGGATCGGTGGGGCCCGCAACGGAGAGT
TTTGAGGCCCACAAAACGACGAATGACGTGGCAGATGTCGAAGATTTGAAGAAGTTAGAAGAGGAAATGTGGGGCCGGTTCAACCAGACCGGGTTTTGGAGAAGTTCTTC
TCAAAGACATGAGTAA
Protein sequenceShow/hide protein sequence
MARKVLLRSPAMRHRSPLKDEKIDAPREKRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQRKAASMDFTDGSVGPATES
FEAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSSSQRHE