CuGenDBv2

Gene ID	Lsi06G012700
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Methyltransferase-related protein
Genome location	chr06:23284425..23285197
RNA-Seq Expression	Lsi06G012700
Synteny	Lsi06G012700
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0016740 - transferase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7019097.1 hypothetical protein SDJN02_18055, partial [Cucurbita argyrosperma subsp. argyrosperma]

8.3e-25

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Query:  MCPLRFILIFLSATLAGFFLLRNLKS-PQDFEAGDNSDDNSKDLDSN---SSSFSKVLVCLAMKSGFWMAVDMASGRYLWRHLVPSSKKASD
        MCPLRFILIFLSATLAGFF+LRNLKS PQDFEA DNS+ +S D+ +N   SSSFSK  V  AM+SGFW  VDMASGRYLWRHL+PSSKK S+
Subjt:  MCPLRFILIFLSATLAGFFLLRNLKS-PQDFEAGDNSDDNSKDLDSN---SSSFSKVLVCLAMKSGFWMAVDMASGRYLWRHLVPSSKKASD

XP_008453499.1 PREDICTED: uncharacterized protein LOC103494193 [Cucumis melo]

1.7e-25

75.28

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Query:  MCPLRFILIFLSATLAGFFLLRNLKS-PQDFEAGDNSDDNSKDLDSNSSSFSKVLVCLAMKSGFWMAVDMASGRYLWRHLVPSSKKASD
        MCPLRFILIFLSATLAGFF+LRNLKS PQDF AGDNSDD+SK+LDS+ S+      C  + SGFW  VDMASGRYLWRHL PSSKK SD
Subjt:  MCPLRFILIFLSATLAGFFLLRNLKS-PQDFEAGDNSDDNSKDLDSNSSSFSKVLVCLAMKSGFWMAVDMASGRYLWRHLVPSSKKASD

XP_023525661.1 uncharacterized protein LOC111789199 [Cucurbita pepo subsp. pepo]

4.9e-25

78.65

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Query:  MCPLRFILIFLSATLAGFFLLRNLKS-PQDFEAGDNSDDNSKDLDSNSSSFSKVLVCLAMKSGFWMAVDMASGRYLWRHLVPSSKKASD
        MCPLRFILIFLSATLAGFF+LRNLKS PQDFEA DNSD +S DL SNS+S SK  V  AM+SGFW  VDMASGRYLWRHL PSS+K SD
Subjt:  MCPLRFILIFLSATLAGFFLLRNLKS-PQDFEAGDNSDDNSKDLDSNSSSFSKVLVCLAMKSGFWMAVDMASGRYLWRHLVPSSKKASD

XP_038879201.1 uncharacterized protein LOC120071167 [Benincasa hispida]

7.5e-26

65.18

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Query:  MCPLRFILIFLSATLAGFFLLRNLKS-PQDFEAGDNSDDNSKDLDSNSSSFSKVLVCL-----------------------AMKSGFWMAVDMASGRYLW
        MCPLRFILIFLSATLAGFFLLRNLKS PQDF AGDNSDDNSK+L+S+SSS S+VLV +                        + SGFW  VDMASGRYLW
Subjt:  MCPLRFILIFLSATLAGFFLLRNLKS-PQDFEAGDNSDDNSKDLDSNSSSFSKVLVCL-----------------------AMKSGFWMAVDMASGRYLW

Query:  RHLVPSSKKASD
        RHL PSSKK SD
Subjt:  RHLVPSSKKASD

XP_038895770.1 uncharacterized protein LOC120083933 [Benincasa hispida]

8.3e-25

76.4

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Query:  MCPLRFILIFLSATLAGFFLLRNLKSP-QDFEAGDNSDDNSKDLDSNSSSFSKVLVCLAMKSGFWMAVDMASGRYLWRHLVPSSKKASD
        MCPLRFILIFLSATLAGFFLLRNLKSP QDF+A DNSD +SKDLDSNSSS S       + SGFW  VDMASGRYLWRHL  SS+K SD
Subjt:  MCPLRFILIFLSATLAGFFLLRNLKSP-QDFEAGDNSDDNSKDLDSNSSSFSKVLVCLAMKSGFWMAVDMASGRYLWRHLVPSSKKASD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LV42 Uncharacterized protein

1.4e-25

75.28

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Query:  MCPLRFILIFLSATLAGFFLLRNLKS-PQDFEAGDNSDDNSKDLDSNSSSFSKVLVCLAMKSGFWMAVDMASGRYLWRHLVPSSKKASD
        MCPLRFILIFLSATLAGFF+LRNLKS PQDF AGDNSDDNS + DS+ SS      C  + SGFW  VDMASGRYLWRHL PSSKK SD
Subjt:  MCPLRFILIFLSATLAGFFLLRNLKS-PQDFEAGDNSDDNSKDLDSNSSSFSKVLVCLAMKSGFWMAVDMASGRYLWRHLVPSSKKASD

A0A1S3BWD8 uncharacterized protein LOC103494193

8.1e-26

75.28

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Query:  MCPLRFILIFLSATLAGFFLLRNLKS-PQDFEAGDNSDDNSKDLDSNSSSFSKVLVCLAMKSGFWMAVDMASGRYLWRHLVPSSKKASD
        MCPLRFILIFLSATLAGFF+LRNLKS PQDF AGDNSDD+SK+LDS+ S+      C  + SGFW  VDMASGRYLWRHL PSSKK SD
Subjt:  MCPLRFILIFLSATLAGFFLLRNLKS-PQDFEAGDNSDDNSKDLDSNSSSFSKVLVCLAMKSGFWMAVDMASGRYLWRHLVPSSKKASD

A0A6J1DPZ0 uncharacterized protein LOC111022014

3.3e-19

69.15

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Query:  MCPLRFILIFLSATLAGFFLLRNLKS-PQDFEAG-DNSDDNSKDLDS--NSSSFSKVLVCLAMKSGFWMAVDMASGRYLWRHLVPSSK--KASD
        MCPLRFILIFLSATLAGFF+LRNLKS PQDFEA  DNSD +S D  +  +S+S SKV       SGFW  VDMASGRYLWRHL PSS   K SD
Subjt:  MCPLRFILIFLSATLAGFFLLRNLKS-PQDFEAG-DNSDDNSKDLDS--NSSSFSKVLVCLAMKSGFWMAVDMASGRYLWRHLVPSSK--KASD

A0A6J1GAZ0 uncharacterized protein LOC111452533

3.4e-24

76.4

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Query:  MCPLRFILIFLSATLAGFFLLRNLKS-PQDFEAGDNSDDNSKDLDSNSSSFSKVLVCLAMKSGFWMAVDMASGRYLWRHLVPSSKKASD
        MCPLRFILIFLSATLAGFF+LRN+KS PQDFEA DNSD +S DL SNS+S SK  V  AM+SGFW  VDMASGRYLWR+L PSS+K SD
Subjt:  MCPLRFILIFLSATLAGFFLLRNLKS-PQDFEAGDNSDDNSKDLDSNSSSFSKVLVCLAMKSGFWMAVDMASGRYLWRHLVPSSKKASD

A0A6J1KER9 uncharacterized protein LOC111492605

6.8e-25

77.53

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Query:  MCPLRFILIFLSATLAGFFLLRNLKS-PQDFEAGDNSDDNSKDLDSNSSSFSKVLVCLAMKSGFWMAVDMASGRYLWRHLVPSSKKASD
        MCPLRFILIFLSATLAGFF+LRNLKS PQDFEA +NSD +S DL SNS+S SK  V  AM+SGFW  VDMASGRYLWRHL PSS+K SD
Subjt:  MCPLRFILIFLSATLAGFFLLRNLKS-PQDFEAGDNSDDNSKDLDSNSSSFSKVLVCLAMKSGFWMAVDMASGRYLWRHLVPSSKKASD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G14602.1 FUNCTIONS IN: molecular_function unknown

3.4e-08

40.51

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Query:  MCPLRFILIFLSATLAGFFLLRNLKSPQDFEAGDNSDDNSKDLDSNSSSFSKVLVCLAMKSGFWMAVDMASGRYLWRHL
        MCPLRF+L+F SA LAG+   R + S  +  + +     +K  +     F +      M +G W  VDMASGRYLWR+L
Subjt:  MCPLRFILIFLSATLAGFFLLRNLKSPQDFEAGDNSDDNSKDLDSNSSSFSKVLVCLAMKSGFWMAVDMASGRYLWRHL

AT5G18150.1 Methyltransferase-related protein

3.3e-11

39.53

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Query:  MCPLRFILIFLSATLAGFFLLRNLKSPQDFEAGDNSDDNSKDLDSNSSSFSKVLVCLAMKSGFWMAVDMASGRYLWRHLVPSSKKA
        MCP+RF+L+F SA LAG+F  + + S  +F++ D  ++  ++L+              M++GFW+ VDMASGRYLWR+L    +K+
Subjt:  MCPLRFILIFLSATLAGFFLLRNLKSPQDFEAGDNSDDNSKDLDSNSSSFSKVLVCLAMKSGFWMAVDMASGRYLWRHLVPSSKKA

AT5G58375.1 Methyltransferase-related protein

2.1e-18

57.47

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Query:  MCPLRFILIFLSATLAGFFLLRNLKSPQDFEAGDNSDDNSKDLDSNSSSFSKVLVCLAMKSGFWMAVDMASGRYLWRHLVPSSKKAS
        MCPLR ILIFLSATLAGFF+L+ L S  D    D+  D     D + S FSK  V +AMKSGFW  VDMASGRYLW +L  ++K++S
Subjt:  MCPLRFILIFLSATLAGFFLLRNLKSPQDFEAGDNSDDNSKDLDSNSSSFSKVLVCLAMKSGFWMAVDMASGRYLWRHLVPSSKKAS

Sequences

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CDS sequence

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mRNA sequence

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ATGTGTCCGCTGAGATTTATTCTCATATTTCTCTCAGCGACTCTTGCCGGCTTCTTCCTTCTCCGCAACCTCAAATCGCCTCAAGATTTCGAGGCCGGCGATAATTCCGA
CGATAACTCCAAGGATTTGGATTCCAATTCGTCGTCGTTCTCTAAGGTTCTTGTGTGTTTGGCTATGAAATCGGGGTTCTGGATGGCGGTCGACATGGCCAGCGGCCGCT
ACTTGTGGAGGCATTTGGTTCCGTCATCGAAGAAGGCTTCCGATTAATGACACTGCGAGTGTTTCGGGTTAGGGCTCATGTTCTTCGCTTGTATATGTGGGTGGACCGTG
GATGAATAATATCTCTTTTTCTCTTTCCCTTTCCCCTTCTCTTCGAGTAGATTTTGTAAAACTCCTCTTCTTCCTTCCGGTCGAGTGTCATCGTTAACATATCTAAGCCT
GTAACAGAAATACTAAAGTGTTCAGAAATGATTAATCGTAAATGCTTCTTATTTCAATTGGGATTTTGAGTTTTGATAATATCCTTAAACGAAAAAAAAAGAAAAAATGA
GTTTAAAAATACTCTTGAACTGTGCTATAAAAATACTCTTAAAAGTTCAAAAAATGTTCTGCACTCTATTTGTCATTGTAAAAAGAATTAGTACTCTTTAACTTCCACAT
ATATATATATATATATATATATATAT

Protein sequence

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MCPLRFILIFLSATLAGFFLLRNLKSPQDFEAGDNSDDNSKDLDSNSSSFSKVLVCLAMKSGFWMAVDMASGRYLWRHLVPSSKKASD

Lsi06G012700 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome