; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi06G012830 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G012830
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAuxin efflux carrier component
Genome locationchr06:23380457..23380765
RNA-Seq ExpressionLsi06G012830
SyntenyLsi06G012830
Gene Ontology termsGO:0009926 - auxin polar transport (biological process)
GO:0010252 - auxin homeostasis (biological process)
GO:0010315 - auxin efflux (biological process)
GO:0055085 - transmembrane transport (biological process)
GO:0005783 - endoplasmic reticulum (cellular component)
GO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0010329 - auxin efflux transmembrane transporter activity (molecular function)
InterPro domainsIPR004776 - Membrane transport protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_016901362.1 PREDICTED: probable auxin efflux carrier component 1c [Cucumis melo]8.6e-4296.74Show/hide
Query:  MISLSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTMNFRFIAADTLQKIIVLVVLGIWTKV
        MI+LSDFYHVMTAVVPLYVAMILAYGSVKWW IFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTM+FRFIAADTLQKIIVLVVLGIWTKV
Subjt:  MISLSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTMNFRFIAADTLQKIIVLVVLGIWTKV

XP_038878571.1 probable auxin efflux carrier component 1c isoform X1 [Benincasa hispida]6.0e-4398.91Show/hide
Query:  MISLSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTMNFRFIAADTLQKIIVLVVLGIWTKV
        MI+LSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTMNFRFIAADTLQKIIVLVVLGIWTKV
Subjt:  MISLSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTMNFRFIAADTLQKIIVLVVLGIWTKV

XP_038878572.1 probable auxin efflux carrier component 1c isoform X2 [Benincasa hispida]6.0e-4398.91Show/hide
Query:  MISLSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTMNFRFIAADTLQKIIVLVVLGIWTKV
        MI+LSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTMNFRFIAADTLQKIIVLVVLGIWTKV
Subjt:  MISLSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTMNFRFIAADTLQKIIVLVVLGIWTKV

XP_038878573.1 probable auxin efflux carrier component 1c isoform X3 [Benincasa hispida]6.0e-4398.91Show/hide
Query:  MISLSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTMNFRFIAADTLQKIIVLVVLGIWTKV
        MI+LSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTMNFRFIAADTLQKIIVLVVLGIWTKV
Subjt:  MISLSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTMNFRFIAADTLQKIIVLVVLGIWTKV

XP_038878574.1 probable auxin efflux carrier component 1c isoform X4 [Benincasa hispida]6.0e-4398.91Show/hide
Query:  MISLSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTMNFRFIAADTLQKIIVLVVLGIWTKV
        MI+LSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTMNFRFIAADTLQKIIVLVVLGIWTKV
Subjt:  MISLSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTMNFRFIAADTLQKIIVLVVLGIWTKV

TrEMBL top hitse value%identityAlignment
A0A0A0LPQ3 Auxin efflux carrier component5.5e-4296.74Show/hide
Query:  MISLSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTMNFRFIAADTLQKIIVLVVLGIWTKV
        MI+L DFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTM+FRFIAADTLQKIIVLVVLGIWTKV
Subjt:  MISLSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTMNFRFIAADTLQKIIVLVVLGIWTKV

A0A1S4DZF4 Auxin efflux carrier component4.2e-4296.74Show/hide
Query:  MISLSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTMNFRFIAADTLQKIIVLVVLGIWTKV
        MI+LSDFYHVMTAVVPLYVAMILAYGSVKWW IFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTM+FRFIAADTLQKIIVLVVLGIWTKV
Subjt:  MISLSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTMNFRFIAADTLQKIIVLVVLGIWTKV

A0A5D3DY61 Auxin efflux carrier component4.2e-4296.74Show/hide
Query:  MISLSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTMNFRFIAADTLQKIIVLVVLGIWTKV
        MI+LSDFYHVMTAVVPLYVAMILAYGSVKWW IFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTM+FRFIAADTLQKIIVLVVLGIWTKV
Subjt:  MISLSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTMNFRFIAADTLQKIIVLVVLGIWTKV

A0A6J1BYW0 Auxin efflux carrier component5.5e-4295.65Show/hide
Query:  MISLSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTMNFRFIAADTLQKIIVLVVLGIWTKV
        MI+LSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTMNFRFIAADTLQKIIVL VL +WTKV
Subjt:  MISLSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTMNFRFIAADTLQKIIVLVVLGIWTKV

D7URM3 Auxin efflux carrier component5.5e-4296.74Show/hide
Query:  MISLSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTMNFRFIAADTLQKIIVLVVLGIWTKV
        MI+L DFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTM+FRFIAADTLQKIIVLVVLGIWTKV
Subjt:  MISLSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTMNFRFIAADTLQKIIVLVVLGIWTKV

SwissProt top hitse value%identityAlignment
Q5SMQ9 Auxin efflux carrier component 1a1.6e-3883.33Show/hide
Query:  MISLSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTMNFRFIAADTLQKIIVLVVLGIWT
        MI+ +DFYHVMTA+VPLYVAMILAYGSVKWW+IFTPDQCSGINRFVALFAVPLLSFHFI++NNPYTMN RFIAADTLQK++VL +L  W+
Subjt:  MISLSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTMNFRFIAADTLQKIIVLVVLGIWT

Q67UL3 Probable auxin efflux carrier component 1c7.1e-3984.44Show/hide
Query:  MISLSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTMNFRFIAADTLQKIIVLVVLGIWT
        MI+ +DFYHVMTA+VPLYVAMILAYGSVKWW+IFTPDQCSGINRFVALFAVPLLSFHFI++NNPYTMN RFIAADTLQK+IVL +L +W+
Subjt:  MISLSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTMNFRFIAADTLQKIIVLVVLGIWT

Q8RWZ6 Auxin efflux carrier component 44.3e-3677.17Show/hide
Query:  MISLSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTMNFRFIAADTLQKIIVLVVLGIWTKV
        MI+  D Y V+TAVVPLYVAMILAYGSV+WWKIF+PDQCSGINRFVA+FAVPLLSFHFI++N+PY MNFRF+AADTLQKII+LV+L +W  +
Subjt:  MISLSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTMNFRFIAADTLQKIIVLVVLGIWTKV

Q940Y5 Auxin efflux carrier component 71.6e-3579.78Show/hide
Query:  MISLSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTMNFRFIAADTLQKIIVLVVLGIW
        MI+  D Y V+TAV+PLYVAMILAYGSV+WWKIF+PDQCSGINRFVA+FAVPLLSFHFI+SNNPY MN RFIAADTLQK+I+L +L IW
Subjt:  MISLSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTMNFRFIAADTLQKIIVLVVLGIW

Q9C6B8 Auxin efflux carrier component 19.3e-3982.61Show/hide
Query:  MISLSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTMNFRFIAADTLQKIIVLVVLGIWTKV
        MI+ +DFYHVMTA+VPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIA+NNPY MN RF+AAD+LQK+IVL +L +W K+
Subjt:  MISLSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTMNFRFIAADTLQKIIVLVVLGIWTKV

Arabidopsis top hitse value%identityAlignment
AT1G23080.1 Auxin efflux carrier family protein1.2e-3679.78Show/hide
Query:  MISLSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTMNFRFIAADTLQKIIVLVVLGIW
        MI+  D Y V+TAV+PLYVAMILAYGSV+WWKIF+PDQCSGINRFVA+FAVPLLSFHFI+SNNPY MN RFIAADTLQK+I+L +L IW
Subjt:  MISLSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTMNFRFIAADTLQKIIVLVVLGIW

AT1G23080.2 Auxin efflux carrier family protein1.2e-3679.78Show/hide
Query:  MISLSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTMNFRFIAADTLQKIIVLVVLGIW
        MI+  D Y V+TAV+PLYVAMILAYGSV+WWKIF+PDQCSGINRFVA+FAVPLLSFHFI+SNNPY MN RFIAADTLQK+I+L +L IW
Subjt:  MISLSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTMNFRFIAADTLQKIIVLVVLGIW

AT1G73590.1 Auxin efflux carrier family protein6.6e-4082.61Show/hide
Query:  MISLSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTMNFRFIAADTLQKIIVLVVLGIWTKV
        MI+ +DFYHVMTA+VPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIA+NNPY MN RF+AAD+LQK+IVL +L +W K+
Subjt:  MISLSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTMNFRFIAADTLQKIIVLVVLGIWTKV

AT2G01420.1 Auxin efflux carrier family protein3.1e-3777.17Show/hide
Query:  MISLSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTMNFRFIAADTLQKIIVLVVLGIWTKV
        MI+  D Y V+TAVVPLYVAMILAYGSV+WWKIF+PDQCSGINRFVA+FAVPLLSFHFI++N+PY MNFRF+AADTLQKII+LV+L +W  +
Subjt:  MISLSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTMNFRFIAADTLQKIIVLVVLGIWTKV

AT2G01420.2 Auxin efflux carrier family protein3.1e-3777.17Show/hide
Query:  MISLSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTMNFRFIAADTLQKIIVLVVLGIWTKV
        MI+  D Y V+TAVVPLYVAMILAYGSV+WWKIF+PDQCSGINRFVA+FAVPLLSFHFI++N+PY MNFRF+AADTLQKII+LV+L +W  +
Subjt:  MISLSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTMNFRFIAADTLQKIIVLVVLGIWTKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTCATTATCAGACTTTTACCATGTCATGACAGCCGTCGTGCCGCTCTACGTTGCCATGATATTAGCTTACGGTTCTGTCAAATGGTGGAAGATTTTTACCCCCGA
TCAATGCTCCGGTATCAACCGTTTCGTTGCCCTCTTCGCCGTTCCCCTTCTCTCGTTCCACTTCATCGCCTCCAACAATCCCTACACTATGAACTTTCGGTTCATTGCCG
CTGATACCCTCCAGAAAATCATTGTCTTGGTGGTGCTCGGCATCTGGACAAAGGTAATATTAAAACTACCACTAAGCTCAAAAGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTTCATTATCAGACTTTTACCATGTCATGACAGCCGTCGTGCCGCTCTACGTTGCCATGATATTAGCTTACGGTTCTGTCAAATGGTGGAAGATTTTTACCCCCGA
TCAATGCTCCGGTATCAACCGTTTCGTTGCCCTCTTCGCCGTTCCCCTTCTCTCGTTCCACTTCATCGCCTCCAACAATCCCTACACTATGAACTTTCGGTTCATTGCCG
CTGATACCCTCCAGAAAATCATTGTCTTGGTGGTGCTCGGCATCTGGACAAAGGTAATATTAAAACTACCACTAAGCTCAAAAGTTTAA
Protein sequenceShow/hide protein sequence
MISLSDFYHVMTAVVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIASNNPYTMNFRFIAADTLQKIIVLVVLGIWTKVILKLPLSSKV