; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi06G012960 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G012960
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAT-hook motif nuclear-localized protein
Genome locationchr06:23506130..23506489
RNA-Seq ExpressionLsi06G012960
SyntenyLsi06G012960
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0010208 - pollen wall assembly (biological process)
GO:0010228 - vegetative to reproductive phase transition of meristem (biological process)
GO:0010529 - negative regulation of transposition (biological process)
GO:0035067 - negative regulation of histone acetylation (biological process)
GO:1900111 - positive regulation of histone H3-K9 dimethylation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003680 - AT DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0031490 - chromatin DNA binding (molecular function)
InterPro domainsIPR005175 - PPC domain
IPR014476 - AT-hook motif nuclear-localized protein 15-29


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652473.1 hypothetical protein Csa_013658 [Cucumis sativus]6.1e-5594.96Show/hide
Query:  MLGSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVTTAMQSQHYGQNGRSHHHLDVSDLYGMPQNLITNS
        MLGSILPPPAPSGITGLTIYL+GAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEV   MQSQHYGQNGRSHHHLDVSDLYG+PQNLITNS
Subjt:  MLGSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVTTAMQSQHYGQNGRSHHHLDVSDLYGMPQNLITNS

Query:  SLPPELYSWAAAGRTMSKT
        SLPPELYSWA AGRTMSKT
Subjt:  SLPPELYSWAAAGRTMSKT

KAG6589630.1 AT-hook motif nuclear-localized protein 16, partial [Cucurbita argyrosperma subsp. sororia]1.4e-5494.12Show/hide
Query:  MLGSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVTTAMQSQHYGQNGRSHHHLDVSDLYGMPQNLITNS
        MLGSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEV +A+QSQHYGQ+GRSHHH+DVSDLYG+PQNLITNS
Subjt:  MLGSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVTTAMQSQHYGQNGRSHHHLDVSDLYGMPQNLITNS

Query:  SLPPELYSWAAAGRTMSKT
        +LPPELYSWAAAGRTMSKT
Subjt:  SLPPELYSWAAAGRTMSKT

XP_011649113.1 AT-hook motif nuclear-localized protein 16 [Cucumis sativus]6.1e-5594.96Show/hide
Query:  MLGSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVTTAMQSQHYGQNGRSHHHLDVSDLYGMPQNLITNS
        MLGSILPPPAPSGITGLTIYL+GAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEV   MQSQHYGQNGRSHHHLDVSDLYG+PQNLITNS
Subjt:  MLGSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVTTAMQSQHYGQNGRSHHHLDVSDLYGMPQNLITNS

Query:  SLPPELYSWAAAGRTMSKT
        SLPPELYSWA AGRTMSKT
Subjt:  SLPPELYSWAAAGRTMSKT

XP_022987946.1 AT-hook motif nuclear-localized protein 16-like [Cucurbita maxima]3.6e-5594.96Show/hide
Query:  MLGSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVTTAMQSQHYGQNGRSHHHLDVSDLYGMPQNLITNS
        MLGSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEV +A+QSQHYGQNGRSHHH+DVSDLYG+PQNLITNS
Subjt:  MLGSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVTTAMQSQHYGQNGRSHHHLDVSDLYGMPQNLITNS

Query:  SLPPELYSWAAAGRTMSKT
        +LPPELYSWAAAGRTMSKT
Subjt:  SLPPELYSWAAAGRTMSKT

XP_038880552.1 AT-hook motif nuclear-localized protein 16 [Benincasa hispida]3.2e-5697.48Show/hide
Query:  MLGSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVTTAMQSQHYGQNGRSHHHLDVSDLYGMPQNLITNS
        MLGSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEV  AMQSQHYGQNGRSHHHLDVSDLYG+PQNLITNS
Subjt:  MLGSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVTTAMQSQHYGQNGRSHHHLDVSDLYGMPQNLITNS

Query:  SLPPELYSWAAAGRTMSKT
        SLPPELYSWAAAGRTMSKT
Subjt:  SLPPELYSWAAAGRTMSKT

TrEMBL top hitse value%identityAlignment
A0A0A0LS82 PPC domain-containing protein2.9e-5594.96Show/hide
Query:  MLGSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVTTAMQSQHYGQNGRSHHHLDVSDLYGMPQNLITNS
        MLGSILPPPAPSGITGLTIYL+GAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEV   MQSQHYGQNGRSHHHLDVSDLYG+PQNLITNS
Subjt:  MLGSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVTTAMQSQHYGQNGRSHHHLDVSDLYGMPQNLITNS

Query:  SLPPELYSWAAAGRTMSKT
        SLPPELYSWA AGRTMSKT
Subjt:  SLPPELYSWAAAGRTMSKT

A0A1S3BX46 AT-hook motif nuclear-localized protein 166.6e-5594.12Show/hide
Query:  MLGSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVTTAMQSQHYGQNGRSHHHLDVSDLYGMPQNLITNS
        MLGSILPPPAPSGITGLTIYL+GAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEV   MQSQHYGQNGRSHHHLDVSDLYG+PQNLITNS
Subjt:  MLGSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVTTAMQSQHYGQNGRSHHHLDVSDLYGMPQNLITNS

Query:  SLPPELYSWAAAGRTMSKT
        SLPPELY+WA AGRTMSKT
Subjt:  SLPPELYSWAAAGRTMSKT

A0A5A7USJ9 AT-hook motif nuclear-localized protein 166.6e-5594.12Show/hide
Query:  MLGSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVTTAMQSQHYGQNGRSHHHLDVSDLYGMPQNLITNS
        MLGSILPPPAPSGITGLTIYL+GAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEV   MQSQHYGQNGRSHHHLDVSDLYG+PQNLITNS
Subjt:  MLGSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVTTAMQSQHYGQNGRSHHHLDVSDLYGMPQNLITNS

Query:  SLPPELYSWAAAGRTMSKT
        SLPPELY+WA AGRTMSKT
Subjt:  SLPPELYSWAAAGRTMSKT

A0A6J1E283 AT-hook motif nuclear-localized protein 16-like6.6e-5594.12Show/hide
Query:  MLGSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVTTAMQSQHYGQNGRSHHHLDVSDLYGMPQNLITNS
        MLGSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEV +A+QSQHYGQ+GRSHHH+DVSDLYG+PQNLITNS
Subjt:  MLGSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVTTAMQSQHYGQNGRSHHHLDVSDLYGMPQNLITNS

Query:  SLPPELYSWAAAGRTMSKT
        +LPPELYSWAAAGRTMSKT
Subjt:  SLPPELYSWAAAGRTMSKT

A0A6J1JFT0 AT-hook motif nuclear-localized protein 16-like1.7e-5594.96Show/hide
Query:  MLGSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVTTAMQSQHYGQNGRSHHHLDVSDLYGMPQNLITNS
        MLGSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEV +A+QSQHYGQNGRSHHH+DVSDLYG+PQNLITNS
Subjt:  MLGSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVTTAMQSQHYGQNGRSHHHLDVSDLYGMPQNLITNS

Query:  SLPPELYSWAAAGRTMSKT
        +LPPELYSWAAAGRTMSKT
Subjt:  SLPPELYSWAAAGRTMSKT

SwissProt top hitse value%identityAlignment
O22130 AT-hook motif nuclear-localized protein 222.1e-1848Show/hide
Query:  GSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLP--SDDEEVTTA------------------MQSQHYGQNGRSHH
        GS LPPPAP   +GLTIYLAG QGQVVGG VVG L+ASGPVVIMAA+F NA ++RLP   DD+E  TA                   Q+Q   Q  +   
Subjt:  GSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLP--SDDEEVTTA------------------MQSQHYGQNGRSHH

Query:  HLDVSDLYGMPQNLITNSSLPPELY
            S + G+P NL+ +  LP E Y
Subjt:  HLDVSDLYGMPQNLITNSSLPPELY

Q8GWQ2 AT-hook motif nuclear-localized protein 201.4e-1745.45Show/hide
Query:  MLGSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVTTAMQSQHYGQNGRSHHHLDVSDL-------YGMP
        + G+ LP P+P G TGLT+YLAG QGQVVGG VVG L+A G V+++AATF NAT++RLP ++EE     +  H G +       ++ DL       Y MP
Subjt:  MLGSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVTTAMQSQHYGQNGRSHHHLDVSDL-------YGMP

Query:  QNLITNSS--LPPELYSWAAA
         +LI N +  L  E Y+W  A
Subjt:  QNLITNSS--LPPELYSWAAA

Q9LZX7 AT-hook motif nuclear-localized protein 181.2e-1848.62Show/hide
Query:  GSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVT----TAMQSQHYGQNGRSHHHLDVSDLYGMPQNLIT
        GS LPPPAP   +GL +YLAG QGQV+GG VVG L AS PVV+MAA+F NA+++RLP ++EE T        ++  G   +     D +   G P NLI 
Subjt:  GSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVT----TAMQSQHYGQNGRSHHHLDVSDLYGMPQNLIT

Query:  NSSLPPELY
        + SLP E Y
Subjt:  NSSLPPELY

Q9SJG4 AT-hook motif nuclear-localized protein 164.3e-3566.95Show/hide
Query:  MLGSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVTTAMQSQHYGQNGRSHHHLDVSDLYGMPQNLITNS
        +LGSILPPPAP GITGLTIYLAG QGQVVGG VVG LIASGPVV+MAA+FMNA FDRLP DD+E   +MQ+Q Y QNGRS     + D++G+PQNL+TN 
Subjt:  MLGSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVTTAMQSQHYGQNGRSHHHLDVSDLYGMPQNLITNS

Query:  SLPPELYSWAAAGRTMSK
        +   ++YSW  A R MSK
Subjt:  SLPPELYSWAAAGRTMSK

Q9SZ70 AT-hook motif nuclear-localized protein 262.1e-1846.02Show/hide
Query:  GSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVTTAMQSQHYG-----------QNGRSHHHLDVSDLYG
        GS LPPPAP   TGL++YLAG QGQVVGG VVG L+ SGPVV+MAA+F NA ++RLP +++E+ T +Q    G             G+      ++   G
Subjt:  GSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVTTAMQSQHYG-----------QNGRSHHHLDVSDLYG

Query:  MPQNLITNSSLPP
        +P NL+ +  LPP
Subjt:  MPQNLITNSSLPP

Arabidopsis top hitse value%identityAlignment
AT2G42940.1 Predicted AT-hook DNA-binding family protein3.0e-3666.95Show/hide
Query:  MLGSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVTTAMQSQHYGQNGRSHHHLDVSDLYGMPQNLITNS
        +LGSILPPPAP GITGLTIYLAG QGQVVGG VVG LIASGPVV+MAA+FMNA FDRLP DD+E   +MQ+Q Y QNGRS     + D++G+PQNL+TN 
Subjt:  MLGSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVTTAMQSQHYGQNGRSHHHLDVSDLYGMPQNLITNS

Query:  SLPPELYSWAAAGRTMSK
        +   ++YSW  A R MSK
Subjt:  SLPPELYSWAAAGRTMSK

AT2G45430.1 AT-hook motif nuclear-localized protein 221.5e-1948Show/hide
Query:  GSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLP--SDDEEVTTA------------------MQSQHYGQNGRSHH
        GS LPPPAP   +GLTIYLAG QGQVVGG VVG L+ASGPVVIMAA+F NA ++RLP   DD+E  TA                   Q+Q   Q  +   
Subjt:  GSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLP--SDDEEVTTA------------------MQSQHYGQNGRSHH

Query:  HLDVSDLYGMPQNLITNSSLPPELY
            S + G+P NL+ +  LP E Y
Subjt:  HLDVSDLYGMPQNLITNSSLPPELY

AT3G60870.1 AT-hook motif nuclear-localized protein 188.9e-2048.62Show/hide
Query:  GSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVT----TAMQSQHYGQNGRSHHHLDVSDLYGMPQNLIT
        GS LPPPAP   +GL +YLAG QGQV+GG VVG L AS PVV+MAA+F NA+++RLP ++EE T        ++  G   +     D +   G P NLI 
Subjt:  GSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVT----TAMQSQHYGQNGRSHHHLDVSDLYGMPQNLIT

Query:  NSSLPPELY
        + SLP E Y
Subjt:  NSSLPPELY

AT4G12050.1 Predicted AT-hook DNA-binding family protein1.5e-1946.02Show/hide
Query:  GSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVTTAMQSQHYG-----------QNGRSHHHLDVSDLYG
        GS LPPPAP   TGL++YLAG QGQVVGG VVG L+ SGPVV+MAA+F NA ++RLP +++E+ T +Q    G             G+      ++   G
Subjt:  GSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVTTAMQSQHYG-----------QNGRSHHHLDVSDLYG

Query:  MPQNLITNSSLPP
        +P NL+ +  LPP
Subjt:  MPQNLITNSSLPP

AT4G35390.1 AT-hook protein of GA feedback 19.8e-1963.16Show/hide
Query:  MLGSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEV----TTAMQSQ
        + G+ LPPPAP G  GLT+YLAG QGQVVGG V G+LIASGPVV+MAA+F NA +DRLP ++EE     TT +Q Q
Subjt:  MLGSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEV----TTAMQSQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGGGTCGATCTTGCCACCACCGGCACCATCGGGAATCACTGGCCTGACAATTTACTTAGCCGGTGCACAAGGGCAGGTGGTTGGTGGAGTCGTAGTGGGTGCGCT
CATTGCTTCTGGTCCGGTCGTGATCATGGCAGCAACGTTCATGAACGCGACGTTTGACCGCCTGCCATCGGACGACGAAGAAGTGACCACCGCCATGCAGAGTCAACATT
ACGGCCAAAATGGGCGGAGCCACCACCACCTGGATGTTTCGGATCTGTATGGAATGCCACAGAATTTGATCACCAATAGTAGTCTTCCGCCGGAATTATACTCTTGGGCG
GCGGCTGGTAGAACCATGTCAAAGACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGGGTCGATCTTGCCACCACCGGCACCATCGGGAATCACTGGCCTGACAATTTACTTAGCCGGTGCACAAGGGCAGGTGGTTGGTGGAGTCGTAGTGGGTGCGCT
CATTGCTTCTGGTCCGGTCGTGATCATGGCAGCAACGTTCATGAACGCGACGTTTGACCGCCTGCCATCGGACGACGAAGAAGTGACCACCGCCATGCAGAGTCAACATT
ACGGCCAAAATGGGCGGAGCCACCACCACCTGGATGTTTCGGATCTGTATGGAATGCCACAGAATTTGATCACCAATAGTAGTCTTCCGCCGGAATTATACTCTTGGGCG
GCGGCTGGTAGAACCATGTCAAAGACTTAA
Protein sequenceShow/hide protein sequence
MLGSILPPPAPSGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVTTAMQSQHYGQNGRSHHHLDVSDLYGMPQNLITNSSLPPELYSWA
AAGRTMSKT