CuGenDBv2

Gene ID	Lsi06G013110
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Stress up-regulated Nod 19 protein
Genome location	chr06:23676371..23681842
RNA-Seq Expression	Lsi06G013110
Synteny	Lsi06G013110
Gene Ontology terms	GO:0016020 - membrane (cellular component)
InterPro domains	IPR011692 - Stress up-regulated Nod 19

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

TYK28452.1 stress up-regulated Nod 19 protein [Cucumis melo var. makuwa]

1.8e-136

77.63

Show/hide

Query:  MNMVIKTQTFSSPSFLMTPGLVIEKYYYNINFPKSHIAIKSFEVKVVDESGNQISVSDTYLHHWSLVRYYQHKNATNPTTNTPYGLLQKPNFIISTNNNG
        MNMVIKTQTFSSPSF MTPGLVIEKY+Y+INFPKSHIAIKSF+V+VVDESGNQI +  TYLHHW+LVRYYQHKNATNPT NT Y  LQ+PNFI++ +NNG
Subjt:  MNMVIKTQTFSSPSFLMTPGLVIEKYYYNINFPKSHIAIKSFEVKVVDESGNQISVSDTYLHHWSLVRYYQHKNATNPTTNTPYGLLQKPNFIISTNNNG

Query:  VCQQATYPFYYAMGPESRTLSTFLPHPYGIEVGNLAEIPIDYEERWSLNVHAIDIRGAENKLGCIECHCHLYNITKDRFGKPLREDYKGGLKCCYDKTEC
        VC +     YYAMG ESR LSTFLPHPYGIEVGN  EIP DYEERWSLNVHAID RGAENKLGCIECHCHLYNITKDRFG+PL EDYKGGL+CCYDKT+C
Subjt:  VCQQATYPFYYAMGPESRTLSTFLPHPYGIEVGNLAEIPIDYEERWSLNVHAIDIRGAENKLGCIECHCHLYNITKDRFGKPLREDYKGGLKCCYDKTEC

Query:  RVNLSDGEDYQERNLYVKYTVKWVDWDDNFVIPVKVYFFDVTDTWKPLTDSIGPFQQHHCQVEYDV--KSCSLANKLDDGKCNDVKKSKVMFRSSSDQYL
        RVN+SDGED++ERNL+V+Y V+WVDW+D FVIPVKVY  DVTDTWKPL+DS    QQH+C +EYDV  +SCS  NK+DD KCN VKKSK+MF SS   YL
Subjt:  RVNLSDGEDYQERNLYVKYTVKWVDWDDNFVIPVKVYFFDVTDTWKPLTDSIGPFQQHHCQVEYDV--KSCSLANKLDDGKCNDVKKSKVMFRSSSDQYL

Query:  IYGV
        IYGV
Subjt:  IYGV

TYK28453.1 uncharacterized protein E5676_scaffold629G00850 [Cucumis melo var. makuwa]

4.1e-136

77.63

Show/hide

Query:  MNMVIKTQTFSSPSFLMTPGLVIEKYYYNINFPKSHIAIKSFEVKVVDESGNQISVSDTYLHHWSLVRYYQHKNATNPTTNTPYGLLQKPNFIISTNNNG
        MNMVIKTQTFSSPSF  TPGLVIEK++YNINFPKSHIAIKSF+V+VVDESGNQ+ +  TYLHHW+LVRYYQHKNATNPT NT +  LQ+PNFII+ +NNG
Subjt:  MNMVIKTQTFSSPSFLMTPGLVIEKYYYNINFPKSHIAIKSFEVKVVDESGNQISVSDTYLHHWSLVRYYQHKNATNPTTNTPYGLLQKPNFIISTNNNG

Query:  VCQQATYPFYYAMGPESRTLSTFLPHPYGIEVGNLAEIPIDYEERWSLNVHAIDIRGAENKLGCIECHCHLYNITKDRFGKPLREDYKGGLKCCYDKTEC
        VC +   P YYAMG ESR LSTFLPHPYGIEVGN  EIP DYEERWSLNVHAID RGAENKLGCIECHCHLYNITKDRFG+PL EDYKGGL+CCYDKT+C
Subjt:  VCQQATYPFYYAMGPESRTLSTFLPHPYGIEVGNLAEIPIDYEERWSLNVHAIDIRGAENKLGCIECHCHLYNITKDRFGKPLREDYKGGLKCCYDKTEC

Query:  RVNLSDGEDYQERNLYVKYTVKWVDWDDNFVIPVKVYFFDVTDTWKPLTDSIGPFQQHHCQVEYDV--KSCSLANKLDDGKCNDVKKSKVMFRSSSDQYL
        RVN+ DGE +QERNL+V+Y VKWVDW+D  VIPVKVY FDVTDTWKPL+DS    QQH+C +EYDV  +SCS  NK+DD KCN VKKSKVMF SS   YL
Subjt:  RVNLSDGEDYQERNLYVKYTVKWVDWDDNFVIPVKVYFFDVTDTWKPLTDSIGPFQQHHCQVEYDV--KSCSLANKLDDGKCNDVKKSKVMFRSSSDQYL

Query:  IYGV
        IYGV
Subjt:  IYGV

XP_008453438.1 PREDICTED: uncharacterized protein LOC103494145 [Cucumis melo]

8.3e-137

77.96

Show/hide

Query:  MNMVIKTQTFSSPSFLMTPGLVIEKYYYNINFPKSHIAIKSFEVKVVDESGNQISVSDTYLHHWSLVRYYQHKNATNPTTNTPYGLLQKPNFIISTNNNG
        MNMVIKTQTFSSPSF MTPGLVIEKY+Y+INFPKSHIAIKSF+V+VVDESGNQI +  TYLHHW+LVRYYQHKNATNPT NT Y  LQ+PNFII+ +NNG
Subjt:  MNMVIKTQTFSSPSFLMTPGLVIEKYYYNINFPKSHIAIKSFEVKVVDESGNQISVSDTYLHHWSLVRYYQHKNATNPTTNTPYGLLQKPNFIISTNNNG

Query:  VCQQATYPFYYAMGPESRTLSTFLPHPYGIEVGNLAEIPIDYEERWSLNVHAIDIRGAENKLGCIECHCHLYNITKDRFGKPLREDYKGGLKCCYDKTEC
        VC +     YYAMG ESR LSTFLPHPYGIEVGN  EIP DYEERWSLNVHAID RGAENKLGCIECHCHLYNITKDRFG+PL EDYKGGL+CCYDKT+C
Subjt:  VCQQATYPFYYAMGPESRTLSTFLPHPYGIEVGNLAEIPIDYEERWSLNVHAIDIRGAENKLGCIECHCHLYNITKDRFGKPLREDYKGGLKCCYDKTEC

Query:  RVNLSDGEDYQERNLYVKYTVKWVDWDDNFVIPVKVYFFDVTDTWKPLTDSIGPFQQHHCQVEYDV--KSCSLANKLDDGKCNDVKKSKVMFRSSSDQYL
        RVN+SDGED++ERNL+V+Y V+WVDW+D FVIPVKVY  DVTDTWKPL+DS    QQH+C +EYDV  +SCS  NK+DD KCN VKKSK+MF SS   YL
Subjt:  RVNLSDGEDYQERNLYVKYTVKWVDWDDNFVIPVKVYFFDVTDTWKPLTDSIGPFQQHHCQVEYDV--KSCSLANKLDDGKCNDVKKSKVMFRSSSDQYL

Query:  IYGV
        IYGV
Subjt:  IYGV

XP_011648993.2 uncharacterized protein LOC101210584 [Cucumis sativus]

5.4e-136

78.69

Show/hide

Query:  MNMVIKTQTFSSPSFLMTPGLVIEKYYYNINFPKSHIAIKSFEVKVVDESGNQISVSDTYLHHWSLVRYYQHKNATNPTTNTPYGLLQKPNFIISTNNNG
        MNMVIKTQTF SPSF MTPGLVIEK++YNINFPKSHIAIKSF V+VVDESGNQI +  TYLHHW LVRYYQHKNATNPT NT Y  LQ+PNFII+ +N+G
Subjt:  MNMVIKTQTFSSPSFLMTPGLVIEKYYYNINFPKSHIAIKSFEVKVVDESGNQISVSDTYLHHWSLVRYYQHKNATNPTTNTPYGLLQKPNFIISTNNNG

Query:  VCQQATYPFYYAMGPESRTLSTFLPHPYGIEVGNLAEIPIDYEERWSLNVHAIDIRGAENKLGCIECHCHLYNITKDRFGKPLREDYKGGLKCCYDKTEC
        VC++   P YYAMG ESR LSTFLPHPYGIEVGN  EIP DYEERWSLNVHAID RGAENKLGCIECHCHLYNITKDR G+PL EDYKGGL+CCYDKT+C
Subjt:  VCQQATYPFYYAMGPESRTLSTFLPHPYGIEVGNLAEIPIDYEERWSLNVHAIDIRGAENKLGCIECHCHLYNITKDRFGKPLREDYKGGLKCCYDKTEC

Query:  RVN-LSDGEDYQERNLYVKYTVKWVDWDDNFVIPVKVYFFDVTDTWKPLTDSIGPFQQHHCQVEYDVKS--CSLANKLDDGKCNDVKKSKVMFRSSSDQY
        RVN LSDGED+QERNL+V+Y VKWVDW+D FVIPVK+Y FDVTDT KPL+DS    QQHHC +EYDV++  CSL NKLDD KCN VKKSKVMF SS   Y
Subjt:  RVN-LSDGEDYQERNLYVKYTVKWVDWDDNFVIPVKVYFFDVTDTWKPLTDSIGPFQQHHCQVEYDVKS--CSLANKLDDGKCNDVKKSKVMFRSSSDQY

Query:  LIYGV
        LIYGV
Subjt:  LIYGV

XP_038883327.1 uncharacterized protein LOC120074311 [Benincasa hispida]

9.5e-141

79.61

Show/hide

Query:  MNMVIKTQTFSSPSFLMTPGLVIEKYYYNINFPKSHIAIKSFEVKVVDESGNQISVSDTYLHHWSLVRYYQHKNATNPTTNTPYGLLQKPNFIISTNNNG
        MNM+IKTQTFSSPSF MTPGLVIEK+YYNI FPKSHIAIKSFEV+VVDESGNQI + +TYLHHW+LVRYYQHKNATNPT NT Y  LQ+PNFII+ +NNG
Subjt:  MNMVIKTQTFSSPSFLMTPGLVIEKYYYNINFPKSHIAIKSFEVKVVDESGNQISVSDTYLHHWSLVRYYQHKNATNPTTNTPYGLLQKPNFIISTNNNG

Query:  VCQQATYPFYYAMGPESRTLSTFLPHPYGIEVGNLAEIPIDYEERWSLNVHAIDIRGAENKLGCIECHCHLYNITKDRFGKPLREDYKGGLKCCYDKTEC
        VCQ+     YYAMG ESRT+STFLP+PYGIEVGN +EIP DYEERWSLNVHAIDIRGAENKLGCIECHCHLYNIT+DRFG+PLR +YKGGL+CCYDKT C
Subjt:  VCQQATYPFYYAMGPESRTLSTFLPHPYGIEVGNLAEIPIDYEERWSLNVHAIDIRGAENKLGCIECHCHLYNITKDRFGKPLREDYKGGLKCCYDKTEC

Query:  RVNLSDGEDYQERNLYVKYTVKWVDWDDNFVIPVKVYFFDVTDTWKPLTDSIGPFQQHHCQVEY--DVKSCSLANKLDDGKCNDVKKSKVMFRSSSDQYL
        RVNLSDG DYQERNL+V+Y VKWVDW+D FVIPVKVY FDVTD W PL DS G  +QH+C +EY  DV+SCSL NK+DDGKCNDVKKSKVMF SS   YL
Subjt:  RVNLSDGEDYQERNLYVKYTVKWVDWDDNFVIPVKVYFFDVTDTWKPLTDSIGPFQQHHCQVEY--DVKSCSLANKLDDGKCNDVKKSKVMFRSSSDQYL

Query:  IYGV
        IYGV
Subjt:  IYGV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LS56 Uncharacterized protein

3.4e-136

78.69

Show/hide

Query:  MNMVIKTQTFSSPSFLMTPGLVIEKYYYNINFPKSHIAIKSFEVKVVDESGNQISVSDTYLHHWSLVRYYQHKNATNPTTNTPYGLLQKPNFIISTNNNG
        MNMVIKTQTF SPSF MTPGLVIEK++YNINFPKSHIAIKSF V+VVDESGNQI +S TYLHHW LVRYYQHKNATNPT NT Y  LQ+PNFII+ +N+G
Subjt:  MNMVIKTQTFSSPSFLMTPGLVIEKYYYNINFPKSHIAIKSFEVKVVDESGNQISVSDTYLHHWSLVRYYQHKNATNPTTNTPYGLLQKPNFIISTNNNG

Query:  VCQQATYPFYYAMGPESRTLSTFLPHPYGIEVGNLAEIPIDYEERWSLNVHAIDIRGAENKLGCIECHCHLYNITKDRFGKPLREDYKGGLKCCYDKTEC
        VC++   P YYAMG ESR LSTFLPHPYGIEVGN  EIP DYEERWSLNVHAID RGAENKLGCIECHCHLYNITKDR G+PL EDYKGGL+CCYDKT+C
Subjt:  VCQQATYPFYYAMGPESRTLSTFLPHPYGIEVGNLAEIPIDYEERWSLNVHAIDIRGAENKLGCIECHCHLYNITKDRFGKPLREDYKGGLKCCYDKTEC

Query:  RVN-LSDGEDYQERNLYVKYTVKWVDWDDNFVIPVKVYFFDVTDTWKPLTDSIGPFQQHHCQVEYDVKS--CSLANKLDDGKCNDVKKSKVMFRSSSDQY
        RVN LSDGED+ ERNL+V+Y VKWVDW+D FVIPVK+Y FDVTDT KPL+DS    QQHHC +EYDV++  CSL NKLDD KCN VKKSKVMF SS   Y
Subjt:  RVN-LSDGEDYQERNLYVKYTVKWVDWDDNFVIPVKVYFFDVTDTWKPLTDSIGPFQQHHCQVEYDVKS--CSLANKLDDGKCNDVKKSKVMFRSSSDQY

Query:  LIYGV
        LIYGV
Subjt:  LIYGV

A0A1S3BWB5 uncharacterized protein LOC103494145

4.0e-137

77.96

Show/hide

Query:  MNMVIKTQTFSSPSFLMTPGLVIEKYYYNINFPKSHIAIKSFEVKVVDESGNQISVSDTYLHHWSLVRYYQHKNATNPTTNTPYGLLQKPNFIISTNNNG
        MNMVIKTQTFSSPSF MTPGLVIEKY+Y+INFPKSHIAIKSF+V+VVDESGNQI +  TYLHHW+LVRYYQHKNATNPT NT Y  LQ+PNFII+ +NNG
Subjt:  MNMVIKTQTFSSPSFLMTPGLVIEKYYYNINFPKSHIAIKSFEVKVVDESGNQISVSDTYLHHWSLVRYYQHKNATNPTTNTPYGLLQKPNFIISTNNNG

Query:  VCQQATYPFYYAMGPESRTLSTFLPHPYGIEVGNLAEIPIDYEERWSLNVHAIDIRGAENKLGCIECHCHLYNITKDRFGKPLREDYKGGLKCCYDKTEC
        VC +     YYAMG ESR LSTFLPHPYGIEVGN  EIP DYEERWSLNVHAID RGAENKLGCIECHCHLYNITKDRFG+PL EDYKGGL+CCYDKT+C
Subjt:  VCQQATYPFYYAMGPESRTLSTFLPHPYGIEVGNLAEIPIDYEERWSLNVHAIDIRGAENKLGCIECHCHLYNITKDRFGKPLREDYKGGLKCCYDKTEC

Query:  RVNLSDGEDYQERNLYVKYTVKWVDWDDNFVIPVKVYFFDVTDTWKPLTDSIGPFQQHHCQVEYDV--KSCSLANKLDDGKCNDVKKSKVMFRSSSDQYL
        RVN+SDGED++ERNL+V+Y V+WVDW+D FVIPVKVY  DVTDTWKPL+DS    QQH+C +EYDV  +SCS  NK+DD KCN VKKSK+MF SS   YL
Subjt:  RVNLSDGEDYQERNLYVKYTVKWVDWDDNFVIPVKVYFFDVTDTWKPLTDSIGPFQQHHCQVEYDV--KSCSLANKLDDGKCNDVKKSKVMFRSSSDQYL

Query:  IYGV
        IYGV
Subjt:  IYGV

A0A5A7UX50 Uncharacterized protein

4.0e-137

77.96

Show/hide

Query:  MNMVIKTQTFSSPSFLMTPGLVIEKYYYNINFPKSHIAIKSFEVKVVDESGNQISVSDTYLHHWSLVRYYQHKNATNPTTNTPYGLLQKPNFIISTNNNG
        MNMVIKTQTFSSPSF MTPGLVIEKY+Y+INFPKSHIAIKSF+V+VVDESGNQI +  TYLHHW+LVRYYQHKNATNPT NT Y  LQ+PNFII+ +NNG
Subjt:  MNMVIKTQTFSSPSFLMTPGLVIEKYYYNINFPKSHIAIKSFEVKVVDESGNQISVSDTYLHHWSLVRYYQHKNATNPTTNTPYGLLQKPNFIISTNNNG

Query:  VCQQATYPFYYAMGPESRTLSTFLPHPYGIEVGNLAEIPIDYEERWSLNVHAIDIRGAENKLGCIECHCHLYNITKDRFGKPLREDYKGGLKCCYDKTEC
        VC +     YYAMG ESR LSTFLPHPYGIEVGN  EIP DYEERWSLNVHAID RGAENKLGCIECHCHLYNITKDRFG+PL EDYKGGL+CCYDKT+C
Subjt:  VCQQATYPFYYAMGPESRTLSTFLPHPYGIEVGNLAEIPIDYEERWSLNVHAIDIRGAENKLGCIECHCHLYNITKDRFGKPLREDYKGGLKCCYDKTEC

Query:  RVNLSDGEDYQERNLYVKYTVKWVDWDDNFVIPVKVYFFDVTDTWKPLTDSIGPFQQHHCQVEYDV--KSCSLANKLDDGKCNDVKKSKVMFRSSSDQYL
        RVN+SDGED++ERNL+V+Y V+WVDW+D FVIPVKVY  DVTDTWKPL+DS    QQH+C +EYDV  +SCS  NK+DD KCN VKKSK+MF SS   YL
Subjt:  RVNLSDGEDYQERNLYVKYTVKWVDWDDNFVIPVKVYFFDVTDTWKPLTDSIGPFQQHHCQVEYDV--KSCSLANKLDDGKCNDVKKSKVMFRSSSDQYL

Query:  IYGV
        IYGV
Subjt:  IYGV

A0A5D3DXK9 Uncharacterized protein

2.0e-136

77.63

Show/hide

Query:  MNMVIKTQTFSSPSFLMTPGLVIEKYYYNINFPKSHIAIKSFEVKVVDESGNQISVSDTYLHHWSLVRYYQHKNATNPTTNTPYGLLQKPNFIISTNNNG
        MNMVIKTQTFSSPSF  TPGLVIEK++YNINFPKSHIAIKSF+V+VVDESGNQ+ +  TYLHHW+LVRYYQHKNATNPT NT +  LQ+PNFII+ +NNG
Subjt:  MNMVIKTQTFSSPSFLMTPGLVIEKYYYNINFPKSHIAIKSFEVKVVDESGNQISVSDTYLHHWSLVRYYQHKNATNPTTNTPYGLLQKPNFIISTNNNG

Query:  VCQQATYPFYYAMGPESRTLSTFLPHPYGIEVGNLAEIPIDYEERWSLNVHAIDIRGAENKLGCIECHCHLYNITKDRFGKPLREDYKGGLKCCYDKTEC
        VC +   P YYAMG ESR LSTFLPHPYGIEVGN  EIP DYEERWSLNVHAID RGAENKLGCIECHCHLYNITKDRFG+PL EDYKGGL+CCYDKT+C
Subjt:  VCQQATYPFYYAMGPESRTLSTFLPHPYGIEVGNLAEIPIDYEERWSLNVHAIDIRGAENKLGCIECHCHLYNITKDRFGKPLREDYKGGLKCCYDKTEC

Query:  RVNLSDGEDYQERNLYVKYTVKWVDWDDNFVIPVKVYFFDVTDTWKPLTDSIGPFQQHHCQVEYDV--KSCSLANKLDDGKCNDVKKSKVMFRSSSDQYL
        RVN+ DGE +QERNL+V+Y VKWVDW+D  VIPVKVY FDVTDTWKPL+DS    QQH+C +EYDV  +SCS  NK+DD KCN VKKSKVMF SS   YL
Subjt:  RVNLSDGEDYQERNLYVKYTVKWVDWDDNFVIPVKVYFFDVTDTWKPLTDSIGPFQQHHCQVEYDV--KSCSLANKLDDGKCNDVKKSKVMFRSSSDQYL

Query:  IYGV
        IYGV
Subjt:  IYGV

A0A5D3DY33 Stress up-regulated Nod 19 protein

9.0e-137

77.63

Show/hide

Query:  MNMVIKTQTFSSPSFLMTPGLVIEKYYYNINFPKSHIAIKSFEVKVVDESGNQISVSDTYLHHWSLVRYYQHKNATNPTTNTPYGLLQKPNFIISTNNNG
        MNMVIKTQTFSSPSF MTPGLVIEKY+Y+INFPKSHIAIKSF+V+VVDESGNQI +  TYLHHW+LVRYYQHKNATNPT NT Y  LQ+PNFI++ +NNG
Subjt:  MNMVIKTQTFSSPSFLMTPGLVIEKYYYNINFPKSHIAIKSFEVKVVDESGNQISVSDTYLHHWSLVRYYQHKNATNPTTNTPYGLLQKPNFIISTNNNG

Query:  VCQQATYPFYYAMGPESRTLSTFLPHPYGIEVGNLAEIPIDYEERWSLNVHAIDIRGAENKLGCIECHCHLYNITKDRFGKPLREDYKGGLKCCYDKTEC
        VC +     YYAMG ESR LSTFLPHPYGIEVGN  EIP DYEERWSLNVHAID RGAENKLGCIECHCHLYNITKDRFG+PL EDYKGGL+CCYDKT+C
Subjt:  VCQQATYPFYYAMGPESRTLSTFLPHPYGIEVGNLAEIPIDYEERWSLNVHAIDIRGAENKLGCIECHCHLYNITKDRFGKPLREDYKGGLKCCYDKTEC

Query:  RVNLSDGEDYQERNLYVKYTVKWVDWDDNFVIPVKVYFFDVTDTWKPLTDSIGPFQQHHCQVEYDV--KSCSLANKLDDGKCNDVKKSKVMFRSSSDQYL
        RVN+SDGED++ERNL+V+Y V+WVDW+D FVIPVKVY  DVTDTWKPL+DS    QQH+C +EYDV  +SCS  NK+DD KCN VKKSK+MF SS   YL
Subjt:  RVNLSDGEDYQERNLYVKYTVKWVDWDDNFVIPVKVYFFDVTDTWKPLTDSIGPFQQHHCQVEYDV--KSCSLANKLDDGKCNDVKKSKVMFRSSSDQYL

Query:  IYGV
        IYGV
Subjt:  IYGV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G61820.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Stress up-regulated Nod 19 (InterPro:IPR011692); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

1.2e-77

45.13

Show/hide

Query:  IKTQTFSSPSFLMTPGLVIEKYYYNINFPKSHIAIKSFEVKVVDESGNQISVSDTYLHHWSLVRYYQHKNATNP----------TTNTPYGLLQKPNFII
        IK+  F SP  +M PG V   Y ++I+FP+ HI +K+F+ +VVDE+G  + + +TYLHHW +  YY  K +  P          +   P   L   + II
Subjt:  IKTQTFSSPSFLMTPGLVIEKYYYNINFPKSHIAIKSFEVKVVDESGNQISVSDTYLHHWSLVRYYQHKNATNP----------TTNTPYGLLQKPNFII

Query:  STNNNGVCQQATYPFYYAMGPESRTLSTFLPHPYGIEVGNLAEIPIDYEERWSLNVHAIDIRGAENKLGCIECHCHLYNITKDRFGKPLREDYKGGLKCC
           N G+C+  T   ++ +G E+R  ST++P PY IE+GN  E P  YE +W LN+HAID RG E+K GCIEC C LYN+T D +G+ +R  YKGGL CC
Subjt:  STNNNGVCQQATYPFYYAMGPESRTLSTFLPHPYGIEVGNLAEIPIDYEERWSLNVHAIDIRGAENKLGCIECHCHLYNITKDRFGKPLREDYKGGLKCC

Query:  YDKTECRVNLSDGEDYQERNLYVKYTVKWVDWDDNFVIPVKVYFFDVTDTWKPLTDSIGPFQQHHCQVEYDVKSCSLANKLDDGKCNDVKKSKVMFRSSS
        YDKT+CRV        + R LY+KYTV+WVDWD + V+P KVY FDVTD+W+    S G  Q+H C VEY+VK C    K +   C DVKK  ++     
Subjt:  YDKTECRVNLSDGEDYQERNLYVKYTVKWVDWDDNFVIPVKVYFFDVTDTWKPLTDSIGPFQQHHCQVEYDVKSCSLANKLDDGKCNDVKKSKVMFRSSS

Query:  DQYLIYGV
        D Y++YGV
Subjt:  DQYLIYGV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAATATGGTGATAAAAACTCAAACTTTTTCATCTCCATCATTTCTCATGACACCTGGTTTAGTAATTGAGAAATACTATTACAATATCAACTTCCCAAAATCCCATAT
TGCCATAAAAAGTTTTGAAGTTAAAGTTGTAGATGAATCAGGCAATCAAATCTCAGTTTCAGATACTTATCTTCATCATTGGTCACTTGTAAGATATTACCAACACAAAA
ATGCAACAAACCCAACAACAAATACTCCATATGGTTTACTTCAAAAACCAAACTTTATCATTTCCACTAACAATAATGGAGTCTGCCAACAAGCTACTTACCCATTCTAC
TATGCCATGGGACCTGAATCAAGAACATTATCCACATTTCTTCCACACCCATATGGAATTGAAGTTGGAAACTTAGCTGAAATTCCCATAGATTATGAAGAGAGATGGAG
CCTCAATGTTCATGCAATTGATATTAGAGGAGCAGAGAACAAGTTGGGATGTATTGAATGTCATTGTCATTTGTATAATATTACAAAAGATAGATTTGGAAAGCCATTGA
GGGAAGATTATAAAGGAGGTTTGAAATGTTGTTATGATAAGACAGAGTGTAGAGTGAATCTAAGTGATGGAGAAGATTATCAAGAAAGGAATTTGTATGTGAAATATACA
GTGAAGTGGGTGGATTGGGATGATAATTTTGTCATTCCTGTTAAAGTTTATTTCTTTGATGTTACTGATACTTGGAAGCCATTGACAGACTCAATAGGACCTTTTCAACA
GCATCATTGCCAGGTTGAATATGATGTAAAATCTTGCTCCCTCGCAAATAAGCTTGATGATGGCAAGTGTAATGATGTGAAAAAGTCAAAGGTAATGTTTAGATCATCTA
GTGATCAGTATCTCATCTATGGAGTGTTTTGTTGCGTTGATAATATCTTACAAGTGTCCAATGATGGAGATATGTGTCGAAAAGTGAGACGGGATTGGATTCTTCGTCAA
CGACTTCGGCGTCGAAGCTCTTTATTGCAATATGGCCTTTGGGAAACT

mRNA sequence

Show/hide mRNA sequence

GAGTTGGAATAAACAACAACCACCACCCCATGAATATGGTGATAAAAACTCAAACTTTTTCATCTCCATCATTTCTCATGACACCTGGTTTAGTAATTGAGAAATACTAT
TACAATATCAACTTCCCAAAATCCCATATTGCCATAAAAAGTTTTGAAGTTAAAGTTGTAGATGAATCAGGCAATCAAATCTCAGTTTCAGATACTTATCTTCATCATTG
GTCACTTGTAAGATATTACCAACACAAAAATGCAACAAACCCAACAACAAATACTCCATATGGTTTACTTCAAAAACCAAACTTTATCATTTCCACTAACAATAATGGAG
TCTGCCAACAAGCTACTTACCCATTCTACTATGCCATGGGACCTGAATCAAGAACATTATCCACATTTCTTCCACACCCATATGGAATTGAAGTTGGAAACTTAGCTGAA
ATTCCCATAGATTATGAAGAGAGATGGAGCCTCAATGTTCATGCAATTGATATTAGAGGAGCAGAGAACAAGTTGGGATGTATTGAATGTCATTGTCATTTGTATAATAT
TACAAAAGATAGATTTGGAAAGCCATTGAGGGAAGATTATAAAGGAGGTTTGAAATGTTGTTATGATAAGACAGAGTGTAGAGTGAATCTAAGTGATGGAGAAGATTATC
AAGAAAGGAATTTGTATGTGAAATATACAGTGAAGTGGGTGGATTGGGATGATAATTTTGTCATTCCTGTTAAAGTTTATTTCTTTGATGTTACTGATACTTGGAAGCCA
TTGACAGACTCAATAGGACCTTTTCAACAGCATCATTGCCAGGTTGAATATGATGTAAAATCTTGCTCCCTCGCAAATAAGCTTGATGATGGCAAGTGTAATGATGTGAA
AAAGTCAAAGGTAATGTTTAGATCATCTAGTGATCAGTATCTCATCTATGGAGTGTTTTGTTGCGTTGATAATATCTTACAAGTGTCCAATGATGGAGATATGTGTCGAA
AAGTGAGACGGGATTGGATTCTTCGTCAACGACTTCGGCGTCGAAGCTCTTTATTGCAATATGGCCTTTGGGAAACT

Protein sequence

Show/hide protein sequence

MNMVIKTQTFSSPSFLMTPGLVIEKYYYNINFPKSHIAIKSFEVKVVDESGNQISVSDTYLHHWSLVRYYQHKNATNPTTNTPYGLLQKPNFIISTNNNGVCQQATYPFY
YAMGPESRTLSTFLPHPYGIEVGNLAEIPIDYEERWSLNVHAIDIRGAENKLGCIECHCHLYNITKDRFGKPLREDYKGGLKCCYDKTECRVNLSDGEDYQERNLYVKYT
VKWVDWDDNFVIPVKVYFFDVTDTWKPLTDSIGPFQQHHCQVEYDVKSCSLANKLDDGKCNDVKKSKVMFRSSSDQYLIYGVFCCVDNILQVSNDGDMCRKVRRDWILRQ
RLRRRSSLLQYGLWET

Lsi06G013110 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome