; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi06G013190 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G013190
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionReticulon family protein
Genome locationchr06:23759859..23760278
RNA-Seq ExpressionLsi06G013190
SyntenyLsi06G013190
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER32793.1 reticulon family protein [Striga asiatica]8.5e-1646.4Show/hide
Query:  PQPLKQSNVDIGSDEPGRVGAASGPVDPSQGPVGV----VLGESDSDEGGKVVLVHVTRGFAEFLENGEEFLVGDDLGGDDSVHFEPLGALAPLLELDCG
        PQPL+++ +   +DE   VG    PVDP Q  VGV       E  + EG KVVLV V R  A   E  E   VGDDL    +V  EPLGALAP+ E +  
Subjt:  PQPLKQSNVDIGSDEPGRVGAASGPVDPSQGPVGV----VLGESDSDEGGKVVLVHVTRGFAEFLENGEEFLVGDDLGGDDSVHFEPLGALAPLLELDCG

Query:  PHFWAVAASAHWAWEIVGLNKSGFG
         H   VAA+AHWAWE+VGL++   G
Subjt:  PHFWAVAASAHWAWEIVGLNKSGFG

KAA0058092.1 hypothetical protein E6C27_scaffold274G004000 [Cucumis melo var. makuwa]9.6e-5277.04Show/hide
Query:  MTEISLNSIVLAVATIPQPLKQSNVDIGSDEPGRVGAASGPVDPSQGPVGVVLGESDSDEGGKVVLVHVTRGFAEFLENGEEFLVGDDLGGDDSVHFEPL
        MTEIS NSI+LA+AT PQ LKQ N DIGSDEPGR+ AASGPVDPSQGPVGV L ESDSD+G KVVLVHVTR FAEFLE+GE  L+GDDLGGD SVHFEPL
Subjt:  MTEISLNSIVLAVATIPQPLKQSNVDIGSDEPGRVGAASGPVDPSQGPVGVVLGESDSDEGGKVVLVHVTRGFAEFLENGEEFLVGDDLGGDDSVHFEPL

Query:  GALAPLLELDCGPHFWAVAASAHWAWEIVGLNKSG
        G L PL+E+D G HFWAVAASAHWAW+++GL++ G
Subjt:  GALAPLLELDCGPHFWAVAASAHWAWEIVGLNKSG

KAG7023305.1 LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-4266.91Show/hide
Query:  MTEISLNSIVLAVATIPQPLKQSNVDIGSDEPGRVGAASGPVDPSQGPVGVVLGESDSDEGGKVVLVHVTRGFAEFLENGEEFLVGDDLGGDDSVHFEPL
        M  I ++SIV AVA  PQ L+Q+NVDI S E G VGAA GPVDPSQGPVG+  GE DSDEGG+VVLVHVTRG A   E+GE FLVGD+LGG+ SV+ EPL
Subjt:  MTEISLNSIVLAVATIPQPLKQSNVDIGSDEPGRVGAASGPVDPSQGPVGVVLGESDSDEGGKVVLVHVTRGFAEFLENGEEFLVGDDLGGDDSVHFEPL

Query:  GALAPLLELDCGPHFWAVAASAHWAWEIVGLNKSGFGGH
        GALAPL+E+DCG H   VAA  HW+WE+VGL++ G GGH
Subjt:  GALAPLLELDCGPHFWAVAASAHWAWEIVGLNKSGFGGH

PKA54109.1 hypothetical protein AXF42_Ash018119 [Apostasia shenzhenica]9.4e-1542.11Show/hide
Query:  LNSIVLAVATIPQPLKQSNVDIGSDEPGRVGAASGPVDPSQGPVGVVLGESDSDEGGKVVLV-HVTRGFAEFLENGEEFLVGDDLGGDDSVHFEPLGALA
        L  ++LA    P PL+Q + D  +++P R+GAA GPVDP + PVG    E+D   GG+VVLV       A   E+GEE +VG+D+ G+ +   EPLGALA
Subjt:  LNSIVLAVATIPQPLKQSNVDIGSDEPGRVGAASGPVDPSQGPVGVVLGESDSDEGGKVVLV-HVTRGFAEFLENGEEFLVGDDLGGDDSVHFEPLGALA

Query:  PLLELDCGPHFWAVAASAHWAWEIVGLNKSGFG
        P    +   H  AVAA+A  A  +V + + G G
Subjt:  PLLELDCGPHFWAVAASAHWAWEIVGLNKSGFG

PKA54256.1 hypothetical protein AXF42_Ash000089 [Apostasia shenzhenica]3.0e-0540.23Show/hide
Query:  VGAASGPVDPSQGPVGVVLGESDSDEGGKVVLVHVTRGFAEFLENGEEFLVGDDLGGDDSVHFEPLGALAPLLELDCGPHFWAVAAS
        +G    P+D SQ P+   +   D + GG+VVL+H+TR  AE  EN     V ++   +  V  EPL ALAPL E+D   HF  V  S
Subjt:  VGAASGPVDPSQGPVGVVLGESDSDEGGKVVLVHVTRGFAEFLENGEEFLVGDDLGGDDSVHFEPLGALAPLLELDCGPHFWAVAAS

TrEMBL top hitse value%identityAlignment
A0A0A0LSQ5 Uncharacterized protein1.4e-5377.94Show/hide
Query:  MTEISLNSIVLAVATIPQPLKQSNVDIGSDEPGRVGAASGPVDPSQGPVGVVLGESDSDEGGKVVLVHVTRGFAEFLENGEEFLVGDDLGGDDSVHFEPL
        MTEIS NSI+LAVATIPQPLKQ   DIGS+EPGRV AASGP+DPSQGPVGV L ESDS++GG+VVLVHV R FA+FLE+GE  LVGDDLGGD SVHFEPL
Subjt:  MTEISLNSIVLAVATIPQPLKQSNVDIGSDEPGRVGAASGPVDPSQGPVGVVLGESDSDEGGKVVLVHVTRGFAEFLENGEEFLVGDDLGGDDSVHFEPL

Query:  GALAPLLELDCGPHFWAVAASAHWAWEIVGLNKSGF
        G LAPL+ELD  PHFW VAASAHWAW+++GLN+ GF
Subjt:  GALAPLLELDCGPHFWAVAASAHWAWEIVGLNKSGF

A0A2I0AEY0 Uncharacterized protein4.6e-1542.11Show/hide
Query:  LNSIVLAVATIPQPLKQSNVDIGSDEPGRVGAASGPVDPSQGPVGVVLGESDSDEGGKVVLV-HVTRGFAEFLENGEEFLVGDDLGGDDSVHFEPLGALA
        L  ++LA    P PL+Q + D  +++P R+GAA GPVDP + PVG    E+D   GG+VVLV       A   E+GEE +VG+D+ G+ +   EPLGALA
Subjt:  LNSIVLAVATIPQPLKQSNVDIGSDEPGRVGAASGPVDPSQGPVGVVLGESDSDEGGKVVLV-HVTRGFAEFLENGEEFLVGDDLGGDDSVHFEPLGALA

Query:  PLLELDCGPHFWAVAASAHWAWEIVGLNKSGFG
        P    +   H  AVAA+A  A  +V + + G G
Subjt:  PLLELDCGPHFWAVAASAHWAWEIVGLNKSGFG

A0A2I0AFI3 Uncharacterized protein1.5e-0540.23Show/hide
Query:  VGAASGPVDPSQGPVGVVLGESDSDEGGKVVLVHVTRGFAEFLENGEEFLVGDDLGGDDSVHFEPLGALAPLLELDCGPHFWAVAAS
        +G    P+D SQ P+   +   D + GG+VVL+H+TR  AE  EN     V ++   +  V  EPL ALAPL E+D   HF  V  S
Subjt:  VGAASGPVDPSQGPVGVVLGESDSDEGGKVVLVHVTRGFAEFLENGEEFLVGDDLGGDDSVHFEPLGALAPLLELDCGPHFWAVAAS

A0A5A7PIV6 Reticulon family protein4.1e-1646.4Show/hide
Query:  PQPLKQSNVDIGSDEPGRVGAASGPVDPSQGPVGV----VLGESDSDEGGKVVLVHVTRGFAEFLENGEEFLVGDDLGGDDSVHFEPLGALAPLLELDCG
        PQPL+++ +   +DE   VG    PVDP Q  VGV       E  + EG KVVLV V R  A   E  E   VGDDL    +V  EPLGALAP+ E +  
Subjt:  PQPLKQSNVDIGSDEPGRVGAASGPVDPSQGPVGV----VLGESDSDEGGKVVLVHVTRGFAEFLENGEEFLVGDDLGGDDSVHFEPLGALAPLLELDCG

Query:  PHFWAVAASAHWAWEIVGLNKSGFG
         H   VAA+AHWAWE+VGL++   G
Subjt:  PHFWAVAASAHWAWEIVGLNKSGFG

A0A5D3DYP5 Uncharacterized protein4.7e-5277.04Show/hide
Query:  MTEISLNSIVLAVATIPQPLKQSNVDIGSDEPGRVGAASGPVDPSQGPVGVVLGESDSDEGGKVVLVHVTRGFAEFLENGEEFLVGDDLGGDDSVHFEPL
        MTEIS NSI+LA+AT PQ LKQ N DIGSDEPGR+ AASGPVDPSQGPVGV L ESDSD+G KVVLVHVTR FAEFLE+GE  L+GDDLGGD SVHFEPL
Subjt:  MTEISLNSIVLAVATIPQPLKQSNVDIGSDEPGRVGAASGPVDPSQGPVGVVLGESDSDEGGKVVLVHVTRGFAEFLENGEEFLVGDDLGGDDSVHFEPL

Query:  GALAPLLELDCGPHFWAVAASAHWAWEIVGLNKSG
        G L PL+E+D G HFWAVAASAHWAW+++GL++ G
Subjt:  GALAPLLELDCGPHFWAVAASAHWAWEIVGLNKSG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGAGATTAGTCTTAACTCCATTGTACTCGCAGTGGCTACCATTCCTCAACCTCTGAAGCAATCCAACGTTGACATCGGTTCTGATGAACCGGGTCGGGTGGGCGC
CGCCTCTGGACCAGTCGACCCAAGTCAAGGTCCGGTTGGAGTTGTTCTTGGAGAATCTGATTCCGACGAAGGTGGGAAGGTAGTGCTCGTCCATGTAACAAGAGGGTTTG
CAGAATTTCTGGAAAACGGGGAAGAATTTCTGGTCGGAGACGACTTGGGAGGCGATGATTCGGTCCATTTCGAACCATTGGGAGCCCTTGCGCCATTGTTGGAGCTTGAT
TGTGGGCCGCATTTTTGGGCTGTAGCGGCCTCGGCCCACTGGGCCTGGGAGATCGTAGGCCTCAATAAAAGTGGATTTGGAGGCCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGACAGAGATTAGTCTTAACTCCATTGTACTCGCAGTGGCTACCATTCCTCAACCTCTGAAGCAATCCAACGTTGACATCGGTTCTGATGAACCGGGTCGGGTGGGCGC
CGCCTCTGGACCAGTCGACCCAAGTCAAGGTCCGGTTGGAGTTGTTCTTGGAGAATCTGATTCCGACGAAGGTGGGAAGGTAGTGCTCGTCCATGTAACAAGAGGGTTTG
CAGAATTTCTGGAAAACGGGGAAGAATTTCTGGTCGGAGACGACTTGGGAGGCGATGATTCGGTCCATTTCGAACCATTGGGAGCCCTTGCGCCATTGTTGGAGCTTGAT
TGTGGGCCGCATTTTTGGGCTGTAGCGGCCTCGGCCCACTGGGCCTGGGAGATCGTAGGCCTCAATAAAAGTGGATTTGGAGGCCATTAA
Protein sequenceShow/hide protein sequence
MTEISLNSIVLAVATIPQPLKQSNVDIGSDEPGRVGAASGPVDPSQGPVGVVLGESDSDEGGKVVLVHVTRGFAEFLENGEEFLVGDDLGGDDSVHFEPLGALAPLLELD
CGPHFWAVAASAHWAWEIVGLNKSGFGGH