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Lsi06G013370 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G013370
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr06:23962644..23963261
RNA-Seq ExpressionLsi06G013370
SyntenyLsi06G013370
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059746.1 uncharacterized protein E6C27_scaffold34725G00010 [Cucumis melo var. makuwa]2.6e-8280.86Show/hide
Query:  MEPCVDTRKRLREDSN-DSLFNFVGSNSKFLRLENSSDLNFDAPVSKSIDSSGLDSFQA-HAIQEDLLKILDDTDSSIDRESAIQDLDSVIRSFEKEIEV
        MEPCVDTRKRLR+DSN DSLFN +GS+SKFLRLEN +D NFDAPVS+S      DSFQ+ H IQEDLLKILDDTD+SIDRE+AIQDLDSVIRSFEKEIEV
Subjt:  MEPCVDTRKRLREDSN-DSLFNFVGSNSKFLRLENSSDLNFDAPVSKSIDSSGLDSFQA-HAIQEDLLKILDDTDSSIDRESAIQDLDSVIRSFEKEIEV

Query:  PVPVVQSELGFLLEASDDELGLPPAGEKGEIEGVNLAAQFSGNGSVKGILGFEDEIVTNYCWFENLRSEIKEWDP--EEEVVALGGLFDHTDVAAELPTP
        PVPVVQ ELGFLLEASDDELGLPPAGEK EIE     A+FSG+G VKG+LGFEDEIV+NYCWF+NLR EIKEW P  EEEVVALGGLFDHTDVAAELPT 
Subjt:  PVPVVQSELGFLLEASDDELGLPPAGEKGEIEGVNLAAQFSGNGSVKGILGFEDEIVTNYCWFENLRSEIKEWDP--EEEVVALGGLFDHTDVAAELPTP

Query:  YRSETMRCL
        YRSE M CL
Subjt:  YRSETMRCL

KGN63814.1 hypothetical protein Csa_013978 [Cucumis sativus]6.3e-7676.42Show/hide
Query:  MEPCVDTRKRLREDSNDSLFNFVGSNSKFLRLENSSDLNFDAPVSKSIDSSGLDSFQAHAIQEDLLKILDDTDSSIDRESAIQDLDSVIRSFEKEIEVP-
        MEP +D+RKRLR+DSNDSLFN +GSNSKFLRLEN +  NFDAPVS S DS        H IQEDLLKILDDTD+SIDRE+ IQDLDSVIRSFEKEIEVP 
Subjt:  MEPCVDTRKRLREDSNDSLFNFVGSNSKFLRLENSSDLNFDAPVSKSIDSSGLDSFQAHAIQEDLLKILDDTDSSIDRESAIQDLDSVIRSFEKEIEVP-

Query:  ---VPVVQSELGFLLEASDDELGLPP-AGEKGEIEGVNLAAQFSGNGSVKGILGFEDEIVTNYCWFENLRSEIKEW--DPEEEVVALGGLFDHTDVAAEL
           VPVVQ ELGFLLEASDDELGLPP AGEK EIE     A+FSG+G VKG LGFEDEIV+NYCWF+NLR EIKEW  + EEEVVALGGLFDHTDVAAEL
Subjt:  ---VPVVQSELGFLLEASDDELGLPP-AGEKGEIEGVNLAAQFSGNGSVKGILGFEDEIVTNYCWFENLRSEIKEW--DPEEEVVALGGLFDHTDVAAEL

Query:  PTPYRSETMRCL
        PT YRSE M CL
Subjt:  PTPYRSETMRCL

TYK28413.1 uncharacterized protein E5676_scaffold629G00410 [Cucumis melo var. makuwa]1.2e-8280.86Show/hide
Query:  MEPCVDTRKRLREDSN-DSLFNFVGSNSKFLRLENSSDLNFDAPVSKSIDSSGLDSFQA-HAIQEDLLKILDDTDSSIDRESAIQDLDSVIRSFEKEIEV
        MEPCVDTRKRLR+DSN DSLFN +GS+SKFLRLEN +D NFDAPVS+S      DSFQ+ H IQEDLLKILDDTD+SIDRE+AIQDLDSVIRSFEKEIEV
Subjt:  MEPCVDTRKRLREDSN-DSLFNFVGSNSKFLRLENSSDLNFDAPVSKSIDSSGLDSFQA-HAIQEDLLKILDDTDSSIDRESAIQDLDSVIRSFEKEIEV

Query:  PVPVVQSELGFLLEASDDELGLPPAGEKGEIEGVNLAAQFSGNGSVKGILGFEDEIVTNYCWFENLRSEIKEWDP--EEEVVALGGLFDHTDVAAELPTP
        PVPVVQ ELGFLLEASDDELGLPPAGEK EIE     A+FSG+G VKG+LGFEDEIV+NYCWF+NLR EIKEW P  EEEVVALGGLFDHTDVAAELPT 
Subjt:  PVPVVQSELGFLLEASDDELGLPPAGEKGEIEGVNLAAQFSGNGSVKGILGFEDEIVTNYCWFENLRSEIKEWDP--EEEVVALGGLFDHTDVAAELPTP

Query:  YRSETMRCL
        YRSE M CL
Subjt:  YRSETMRCL

XP_008453684.1 PREDICTED: uncharacterized protein LOC103494333 [Cucumis melo]2.6e-8280.86Show/hide
Query:  MEPCVDTRKRLREDSN-DSLFNFVGSNSKFLRLENSSDLNFDAPVSKSIDSSGLDSFQA-HAIQEDLLKILDDTDSSIDRESAIQDLDSVIRSFEKEIEV
        MEPCVDTRKRLR+DSN DSLFN +GS+SKFLRLEN +D NFDAPVS+S      DSFQ+ H IQEDLLKILDDTD+SIDRE+AIQDLDSVIRSFEKEIEV
Subjt:  MEPCVDTRKRLREDSN-DSLFNFVGSNSKFLRLENSSDLNFDAPVSKSIDSSGLDSFQA-HAIQEDLLKILDDTDSSIDRESAIQDLDSVIRSFEKEIEV

Query:  PVPVVQSELGFLLEASDDELGLPPAGEKGEIEGVNLAAQFSGNGSVKGILGFEDEIVTNYCWFENLRSEIKEWDP--EEEVVALGGLFDHTDVAAELPTP
        PVPVVQ ELGFLLEASDDELGLPPAGEK EIE     A+FSG+G VKG+LGFEDEIV+NYCWF+NLR EIKEW P  EEEVVALGGLFDHTDVAAELPT 
Subjt:  PVPVVQSELGFLLEASDDELGLPPAGEKGEIEGVNLAAQFSGNGSVKGILGFEDEIVTNYCWFENLRSEIKEWDP--EEEVVALGGLFDHTDVAAELPTP

Query:  YRSETMRCL
        YRSE M CL
Subjt:  YRSETMRCL

XP_038890344.1 uncharacterized protein LOC120079943 [Benincasa hispida]1.1e-9387.44Show/hide
Query:  MEPCVDTRKRLREDSNDSLFNFVGSNSKFLRLENSSDLNFDAPVSKSIDSSGLDSFQAHAIQEDLLKILDDTDSSIDRESAIQDLDSVIRSFEKEIEVPV
        MEPCVDTRKRL +DSNDSLFN++GSNSKFLRLENS+DLNFDAPV+KSIDSSGLDSFQAHAIQEDLLKILDDT++SIDRESAI+DLDSVIRSFEKEIEVPV
Subjt:  MEPCVDTRKRLREDSNDSLFNFVGSNSKFLRLENSSDLNFDAPVSKSIDSSGLDSFQAHAIQEDLLKILDDTDSSIDRESAIQDLDSVIRSFEKEIEVPV

Query:  PVVQSELGFLLEASDDELGLPPAGEKGEIEGVNLAAQFSGNGSVKGILGFEDEIVTNYCWFENLRSEIKEWDP--EEEVVALGGLFDHTDVAAELPTPYR
        PVVQ ELGFLLEASDDELGLPPAGEKGEIEG NL     G+G +KGILGFEDE V+NYCWFENLRSEIKEW P  EEEVVALGGLFDHTDVAAELPT YR
Subjt:  PVVQSELGFLLEASDDELGLPPAGEKGEIEGVNLAAQFSGNGSVKGILGFEDEIVTNYCWFENLRSEIKEWDP--EEEVVALGGLFDHTDVAAELPTPYR

Query:  SETMRCL
        SETM CL
Subjt:  SETMRCL

TrEMBL top hitse value%identityAlignment
A0A0A0LS21 Uncharacterized protein3.1e-7676.42Show/hide
Query:  MEPCVDTRKRLREDSNDSLFNFVGSNSKFLRLENSSDLNFDAPVSKSIDSSGLDSFQAHAIQEDLLKILDDTDSSIDRESAIQDLDSVIRSFEKEIEVP-
        MEP +D+RKRLR+DSNDSLFN +GSNSKFLRLEN +  NFDAPVS S DS        H IQEDLLKILDDTD+SIDRE+ IQDLDSVIRSFEKEIEVP 
Subjt:  MEPCVDTRKRLREDSNDSLFNFVGSNSKFLRLENSSDLNFDAPVSKSIDSSGLDSFQAHAIQEDLLKILDDTDSSIDRESAIQDLDSVIRSFEKEIEVP-

Query:  ---VPVVQSELGFLLEASDDELGLPP-AGEKGEIEGVNLAAQFSGNGSVKGILGFEDEIVTNYCWFENLRSEIKEW--DPEEEVVALGGLFDHTDVAAEL
           VPVVQ ELGFLLEASDDELGLPP AGEK EIE     A+FSG+G VKG LGFEDEIV+NYCWF+NLR EIKEW  + EEEVVALGGLFDHTDVAAEL
Subjt:  ---VPVVQSELGFLLEASDDELGLPP-AGEKGEIEGVNLAAQFSGNGSVKGILGFEDEIVTNYCWFENLRSEIKEW--DPEEEVVALGGLFDHTDVAAEL

Query:  PTPYRSETMRCL
        PT YRSE M CL
Subjt:  PTPYRSETMRCL

A0A1S3BWV1 uncharacterized protein LOC1034943331.3e-8280.86Show/hide
Query:  MEPCVDTRKRLREDSN-DSLFNFVGSNSKFLRLENSSDLNFDAPVSKSIDSSGLDSFQA-HAIQEDLLKILDDTDSSIDRESAIQDLDSVIRSFEKEIEV
        MEPCVDTRKRLR+DSN DSLFN +GS+SKFLRLEN +D NFDAPVS+S      DSFQ+ H IQEDLLKILDDTD+SIDRE+AIQDLDSVIRSFEKEIEV
Subjt:  MEPCVDTRKRLREDSN-DSLFNFVGSNSKFLRLENSSDLNFDAPVSKSIDSSGLDSFQA-HAIQEDLLKILDDTDSSIDRESAIQDLDSVIRSFEKEIEV

Query:  PVPVVQSELGFLLEASDDELGLPPAGEKGEIEGVNLAAQFSGNGSVKGILGFEDEIVTNYCWFENLRSEIKEWDP--EEEVVALGGLFDHTDVAAELPTP
        PVPVVQ ELGFLLEASDDELGLPPAGEK EIE     A+FSG+G VKG+LGFEDEIV+NYCWF+NLR EIKEW P  EEEVVALGGLFDHTDVAAELPT 
Subjt:  PVPVVQSELGFLLEASDDELGLPPAGEKGEIEGVNLAAQFSGNGSVKGILGFEDEIVTNYCWFENLRSEIKEWDP--EEEVVALGGLFDHTDVAAELPTP

Query:  YRSETMRCL
        YRSE M CL
Subjt:  YRSETMRCL

A0A5A7UZW3 Uncharacterized protein1.3e-8280.86Show/hide
Query:  MEPCVDTRKRLREDSN-DSLFNFVGSNSKFLRLENSSDLNFDAPVSKSIDSSGLDSFQA-HAIQEDLLKILDDTDSSIDRESAIQDLDSVIRSFEKEIEV
        MEPCVDTRKRLR+DSN DSLFN +GS+SKFLRLEN +D NFDAPVS+S      DSFQ+ H IQEDLLKILDDTD+SIDRE+AIQDLDSVIRSFEKEIEV
Subjt:  MEPCVDTRKRLREDSN-DSLFNFVGSNSKFLRLENSSDLNFDAPVSKSIDSSGLDSFQA-HAIQEDLLKILDDTDSSIDRESAIQDLDSVIRSFEKEIEV

Query:  PVPVVQSELGFLLEASDDELGLPPAGEKGEIEGVNLAAQFSGNGSVKGILGFEDEIVTNYCWFENLRSEIKEWDP--EEEVVALGGLFDHTDVAAELPTP
        PVPVVQ ELGFLLEASDDELGLPPAGEK EIE     A+FSG+G VKG+LGFEDEIV+NYCWF+NLR EIKEW P  EEEVVALGGLFDHTDVAAELPT 
Subjt:  PVPVVQSELGFLLEASDDELGLPPAGEKGEIEGVNLAAQFSGNGSVKGILGFEDEIVTNYCWFENLRSEIKEWDP--EEEVVALGGLFDHTDVAAELPTP

Query:  YRSETMRCL
        YRSE M CL
Subjt:  YRSETMRCL

A0A5D3DXI3 Uncharacterized protein5.8e-8380.86Show/hide
Query:  MEPCVDTRKRLREDSN-DSLFNFVGSNSKFLRLENSSDLNFDAPVSKSIDSSGLDSFQA-HAIQEDLLKILDDTDSSIDRESAIQDLDSVIRSFEKEIEV
        MEPCVDTRKRLR+DSN DSLFN +GS+SKFLRLEN +D NFDAPVS+S      DSFQ+ H IQEDLLKILDDTD+SIDRE+AIQDLDSVIRSFEKEIEV
Subjt:  MEPCVDTRKRLREDSN-DSLFNFVGSNSKFLRLENSSDLNFDAPVSKSIDSSGLDSFQA-HAIQEDLLKILDDTDSSIDRESAIQDLDSVIRSFEKEIEV

Query:  PVPVVQSELGFLLEASDDELGLPPAGEKGEIEGVNLAAQFSGNGSVKGILGFEDEIVTNYCWFENLRSEIKEWDP--EEEVVALGGLFDHTDVAAELPTP
        PVPVVQ ELGFLLEASDDELGLPPAGEK EIE     A+FSG+G VKG+LGFEDEIV+NYCWF+NLR EIKEW P  EEEVVALGGLFDHTDVAAELPT 
Subjt:  PVPVVQSELGFLLEASDDELGLPPAGEKGEIEGVNLAAQFSGNGSVKGILGFEDEIVTNYCWFENLRSEIKEWDP--EEEVVALGGLFDHTDVAAELPTP

Query:  YRSETMRCL
        YRSE M CL
Subjt:  YRSETMRCL

A0A6J1E5H5 uncharacterized protein LOC1114296747.8e-7272.12Show/hide
Query:  MEPCVDTRKRLREDSNDSLFNFVGSNSKFLRLENSSDLNFDAPV-SKSIDSSGLDSFQAHAIQEDLLKILDDTDSSIDRESAIQDLDSVIRSFEKEIEVP
        ME CVD+RKRLR++SNDSLFNF+GSNSKF+RL++++    DAP+ S S D+  +DSFQA+ IQ+DLLKILDD D+ IDRES IQDLDSVIRSFEKEI+VP
Subjt:  MEPCVDTRKRLREDSNDSLFNFVGSNSKFLRLENSSDLNFDAPV-SKSIDSSGLDSFQAHAIQEDLLKILDDTDSSIDRESAIQDLDSVIRSFEKEIEVP

Query:  VPVVQSELGFLLEASDDELGLPPAGEKGEIEGVNLAAQFSGNGSVKGILGFEDEIVTNYCWFENLRSEIKEW--DPEEEVVALGGLFDHTDVAAELPTPY
        VP  Q ELGFLLEASDDELGLPPAGEK E E VN AA+F G+G +KGILG EDE V NYCW ENLRSE  EW  + EEEVV LGGLFDHTDVA EL   Y
Subjt:  VPVVQSELGFLLEASDDELGLPPAGEKGEIEGVNLAAQFSGNGSVKGILGFEDEIVTNYCWFENLRSEIKEW--DPEEEVVALGGLFDHTDVAAELPTPY

Query:  RSETMRCL
        RSETM CL
Subjt:  RSETMRCL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G13360.1 unknown protein1.1e-1236.2Show/hide
Query:  KSIDSSGLDSFQAHAIQEDLLKILDDTDSSIDRESAIQDLDSVIRSFEKEIEVPVPV----------VQSELGFLLEASDDELGLPP---------AGEK
        +S D + LDS +   +++DL  +LDD+D     E   QDLDSV++SFE E+                 Q +LG+LLEASDDELGLPP         A E+
Subjt:  KSIDSSGLDSFQAHAIQEDLLKILDDTDSSIDRESAIQDLDSVIRSFEKEIEVPVPV----------VQSELGFLLEASDDELGLPP---------AGEK

Query:  GEIEGV-NLAAQFSGNGSVKGILGFEDEIVTNYCWFENLRSEIKEWDPEEEVVALGGLFDHTD
           E V +L    S +  +  I GFED  V+NY   +   S + +     + VA+ GLF+ +D
Subjt:  GEIEGV-NLAAQFSGNGSVKGILGFEDEIVTNYCWFENLRSEIKEWDPEEEVVALGGLFDHTD

AT1G13360.2 unknown protein6.9e-1239.1Show/hide
Query:  KSIDSSGLDSFQAHAIQEDLLKILDDTDSSIDRESAIQDLDSVIRSFEKEIEVPVPV----------VQSELGFLLEASDDELGLPP---------AGEK
        +S D + LDS +   +++DL  +LDD+D     E   QDLDSV++SFE E+                 Q +LG+LLEASDDELGLPP         A E+
Subjt:  KSIDSSGLDSFQAHAIQEDLLKILDDTDSSIDRESAIQDLDSVIRSFEKEIEVPVPV----------VQSELGFLLEASDDELGLPP---------AGEK

Query:  GEIEGV-NLAAQFSGNGSVKGILGFEDEIVTNY
           E V +L    S +  +  I GFED  V+NY
Subjt:  GEIEGV-NLAAQFSGNGSVKGILGFEDEIVTNY

AT1G13360.3 unknown protein6.9e-1239.1Show/hide
Query:  KSIDSSGLDSFQAHAIQEDLLKILDDTDSSIDRESAIQDLDSVIRSFEKEIEVPVPV----------VQSELGFLLEASDDELGLPP---------AGEK
        +S D + LDS +   +++DL  +LDD+D     E   QDLDSV++SFE E+                 Q +LG+LLEASDDELGLPP         A E+
Subjt:  KSIDSSGLDSFQAHAIQEDLLKILDDTDSSIDRESAIQDLDSVIRSFEKEIEVPVPV----------VQSELGFLLEASDDELGLPP---------AGEK

Query:  GEIEGV-NLAAQFSGNGSVKGILGFEDEIVTNY
           E V +L    S +  +  I GFED  V+NY
Subjt:  GEIEGV-NLAAQFSGNGSVKGILGFEDEIVTNY

AT3G25870.1 unknown protein1.7e-0736.13Show/hide
Query:  DSSGLDSFQAHAIQEDLLKILDDTDSSIDRESAIQDLDSVIRSFEKEIEVPVPVV-----QSELGFLLEASDDELGLPP--------AGEKGEIEGVNLA
        D   LDS     +++DL       DS +D  S  QDLDSV++SFE E+      +     Q +LG+L EASDDELGLPP             E     L 
Subjt:  DSSGLDSFQAHAIQEDLLKILDDTDSSIDRESAIQDLDSVIRSFEKEIEVPVPVV-----QSELGFLLEASDDELGLPP--------AGEKGEIEGVNLA

Query:  AQFSGNGSVKGILGFEDEI
           S +  V  + GFED +
Subjt:  AQFSGNGSVKGILGFEDEI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACCCTGCGTTGACACAAGGAAGCGGCTACGGGAAGATTCCAACGATTCTCTCTTCAATTTCGTCGGATCCAACTCCAAGTTCCTCCGACTTGAAAATTCCTCCGA
CTTGAACTTCGATGCGCCAGTTTCAAAATCGATCGATTCATCCGGCCTCGATTCGTTTCAGGCGCACGCAATTCAGGAAGACCTACTGAAGATTCTCGATGATACCGACT
CTTCCATAGATCGCGAGTCCGCGATTCAAGATCTGGACTCGGTGATCAGAAGCTTCGAGAAGGAAATTGAAGTGCCGGTGCCTGTTGTTCAGTCTGAACTTGGATTTCTT
CTAGAAGCGTCCGACGACGAATTAGGACTTCCCCCCGCCGGTGAGAAAGGTGAAATTGAAGGCGTTAATCTTGCGGCGCAGTTTTCAGGTAACGGCAGTGTGAAAGGGAT
TTTAGGGTTTGAGGATGAAATCGTTACGAATTACTGTTGGTTTGAAAATTTGAGGAGTGAGATTAAGGAATGGGATCCGGAAGAGGAGGTGGTGGCGTTGGGTGGATTGT
TTGATCATACGGACGTGGCGGCGGAGTTGCCGACGCCGTATCGATCGGAGACGATGCGCTGTTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAACCCTGCGTTGACACAAGGAAGCGGCTACGGGAAGATTCCAACGATTCTCTCTTCAATTTCGTCGGATCCAACTCCAAGTTCCTCCGACTTGAAAATTCCTCCGA
CTTGAACTTCGATGCGCCAGTTTCAAAATCGATCGATTCATCCGGCCTCGATTCGTTTCAGGCGCACGCAATTCAGGAAGACCTACTGAAGATTCTCGATGATACCGACT
CTTCCATAGATCGCGAGTCCGCGATTCAAGATCTGGACTCGGTGATCAGAAGCTTCGAGAAGGAAATTGAAGTGCCGGTGCCTGTTGTTCAGTCTGAACTTGGATTTCTT
CTAGAAGCGTCCGACGACGAATTAGGACTTCCCCCCGCCGGTGAGAAAGGTGAAATTGAAGGCGTTAATCTTGCGGCGCAGTTTTCAGGTAACGGCAGTGTGAAAGGGAT
TTTAGGGTTTGAGGATGAAATCGTTACGAATTACTGTTGGTTTGAAAATTTGAGGAGTGAGATTAAGGAATGGGATCCGGAAGAGGAGGTGGTGGCGTTGGGTGGATTGT
TTGATCATACGGACGTGGCGGCGGAGTTGCCGACGCCGTATCGATCGGAGACGATGCGCTGTTTATAA
Protein sequenceShow/hide protein sequence
MEPCVDTRKRLREDSNDSLFNFVGSNSKFLRLENSSDLNFDAPVSKSIDSSGLDSFQAHAIQEDLLKILDDTDSSIDRESAIQDLDSVIRSFEKEIEVPVPVVQSELGFL
LEASDDELGLPPAGEKGEIEGVNLAAQFSGNGSVKGILGFEDEIVTNYCWFENLRSEIKEWDPEEEVVALGGLFDHTDVAAELPTPYRSETMRCL