; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi06G013440 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G013440
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionWD_REPEATS_REGION domain-containing protein
Genome locationchr06:24025462..24034167
RNA-Seq ExpressionLsi06G013440
SyntenyLsi06G013440
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001680 - WD40 repeat
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR036322 - WD40-repeat-containing domain superfamily
IPR044285 - Periodic tryptophan protein 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149077.1 uncharacterized WD repeat-containing protein C17D11.16 [Cucumis sativus]8.7e-2729.65Show/hide
Query:  MISAVSWVPKGACKPLPVLEDPPTKESIDEFLKFKNVLEDSSKHSDDEVDQEDMDVEDAGDE-----------------------------------DMD
        MISAVSWVPKG CKPLP L DPP++E+ID+ LK   V+EDSSKHSDDE D+EDMDVEDA DE                                   DMD
Subjt:  MISAVSWVPKGACKPLPVLEDPPTKESIDEFLKFKNVLEDSSKHSDDEVDQEDMDVEDAGDE-----------------------------------DMD

Query:  RYDNEDD---------GVLISPSSGLTSHVA-------------------------------------------------LLYRTV------TRTRYLD-
         YDNEDD         G +  PS+ +  ++                                                   ++R +        T +LD 
Subjt:  RYDNEDD---------GVLISPSSGLTSHVA-------------------------------------------------LLYRTV------TRTRYLD-

Query:  ----------------------W-------------------------------------------LG---TRNIRNILSSASADKQVKIWDISTVQCDI
                              W                                           LG    +  RNIL+SASADKQVKIWD+ST QC+I
Subjt:  ----------------------W-------------------------------------------LG---TRNIRNILSSASADKQVKIWDISTVQCDI

Query:  TMQHHTDKVCIPASCTDLDLKILFPAF---------------------------------TIHSILCSLEDGTVKGF----------------------V
        TMQHH DKV   A        +L  +F                                 T H  + SLEDGTVKGF                       
Subjt:  TMQHHTDKVCIPASCTDLDLKILFPAF---------------------------------TIHSILCSLEDGTVKGF----------------------V

Query:  KSFCTLS---NIKGLV----------------YKPSCVASTDLKAGAVFSISFSEDCPFLLS
        K+ C++S   +   L+                 +PSC+AST+ KAGAVFS+SFSEDCPFLL+
Subjt:  KSFCTLS---NIKGLV----------------YKPSCVASTDLKAGAVFSISFSEDCPFLLS

XP_008452352.1 PREDICTED: periodic tryptophan protein 1 homolog [Cucumis melo]2.5e-2629.65Show/hide
Query:  MISAVSWVPKGACKPLPVLEDPPTKESIDEFLKFKNVLEDSSKHSDDEVDQEDMDVEDAGDE-----------------------------------DMD
        MISAVSWVPKG CKP+P L DPP++E IDE LK   V+EDSSKHSDDE D+EDMDVED  DE                                   DMD
Subjt:  MISAVSWVPKGACKPLPVLEDPPTKESIDEFLKFKNVLEDSSKHSDDEVDQEDMDVEDAGDE-----------------------------------DMD

Query:  RYDNEDD---------GVLISPSSGLTSHVA-------------------------------------------------LLYRTV------TRTRYLD-
         YDNEDD         G +  PS+ +  ++                                                   ++R +        T +LD 
Subjt:  RYDNEDD---------GVLISPSSGLTSHVA-------------------------------------------------LLYRTV------TRTRYLD-

Query:  ----------------------W-------------------------------------------LG---TRNIRNILSSASADKQVKIWDISTVQCDI
                              W                                           LG    +  RNIL+SASADKQVKIWD+ T QC+I
Subjt:  ----------------------W-------------------------------------------LG---TRNIRNILSSASADKQVKIWDISTVQCDI

Query:  TMQHHTDKVCIPASCTDLDLKILFPAF---------------------------------TIHSILCSLEDGTVKGF----------------------V
        TMQHHTDKV   A        +L  +F                                 T H  + SLEDGTVKGF                       
Subjt:  TMQHHTDKVCIPASCTDLDLKILFPAF---------------------------------TIHSILCSLEDGTVKGF----------------------V

Query:  KSFCTLS---NIKGLV----------------YKPSCVASTDLKAGAVFSISFSEDCPFLLS
        K+ C++S   +   L+                 +PSCVAST+ KAGAVFS+SFSEDCPFLL+
Subjt:  KSFCTLS---NIKGLV----------------YKPSCVASTDLKAGAVFSISFSEDCPFLLS

XP_022933466.1 uncharacterized WD repeat-containing protein C17D11.16 [Cucurbita moschata]2.5e-2629.68Show/hide
Query:  MISAVSWVPKGACKPLPVLEDPPTKESIDEFLKFKNVL-EDSSKHSDDEVDQEDMDVEDAGDE-----------------------------------DM
        MISAVSWVPKG CKPLPV  DPP+KE+IDE LK K+VL EDSSKHS+DEVD+EDMDVEDA DE                                   DM
Subjt:  MISAVSWVPKGACKPLPVLEDPPTKESIDEFLKFKNVL-EDSSKHSDDEVDQEDMDVEDAGDE-----------------------------------DM

Query:  DRYDNEDDGV-----------------------------------LISPSSGL-----------------------------TSHVALLYRTVTRTRYLD
        D YD+EDD +                                    I P+  +                               H  ++      T +LD
Subjt:  DRYDNEDDGV-----------------------------------LISPSSGL-----------------------------TSHVALLYRTVTRTRYLD

Query:  -----------------------W---------------------------------------------LG---TRNIRNILSSASADKQVKIWDISTVQ
                               W                                             LG    +  RNIL+SASADKQVKIWD+ST +
Subjt:  -----------------------W---------------------------------------------LG---TRNIRNILSSASADKQVKIWDISTVQ

Query:  CDITMQHHTDKVCIPASCTDLDLKILFPAF---------------------------------TIHSILCSLEDGTVKGF--------------------
        C+ITMQHHTDKV   A        +L  +F                                 T H  + SLEDGTVKGF                    
Subjt:  CDITMQHHTDKVCIPASCTDLDLKILFPAF---------------------------------TIHSILCSLEDGTVKGF--------------------

Query:  --VKSFCTLS------------NIKGLV-------YKPSCVASTDLKAGAVFSISFSEDCPFLLS
           K+ C+++            +   +V        +PSCVAST+ KAGAVFS+SFSEDCPFL++
Subjt:  --VKSFCTLS------------NIKGLV-------YKPSCVASTDLKAGAVFSISFSEDCPFLLS

XP_023007202.1 uncharacterized WD repeat-containing protein C17D11.16 [Cucurbita maxima]3.3e-2629.68Show/hide
Query:  MISAVSWVPKGACKPLPVLEDPPTKESIDEFLKFKNVL-EDSSKHSDDEVDQEDMDVEDAGDE-----------------------------------DM
        MISAVSWVPKG CKPLPV  DPP+KE+IDE LK K+VL EDSSKHS+DEVD+EDMDVEDA DE                                   DM
Subjt:  MISAVSWVPKGACKPLPVLEDPPTKESIDEFLKFKNVL-EDSSKHSDDEVDQEDMDVEDAGDE-----------------------------------DM

Query:  DRYDNEDDGV-----------------------------------LISPSSGL-----------------------------TSHVALLYRTVTRTRYLD
        D YD+EDD +                                    I P+  +                               H  ++      T +LD
Subjt:  DRYDNEDDGV-----------------------------------LISPSSGL-----------------------------TSHVALLYRTVTRTRYLD

Query:  -----------------------W---------------------------------------------LG---TRNIRNILSSASADKQVKIWDISTVQ
                               W                                             LG    +  RNIL+SASADKQVKIWD+ST +
Subjt:  -----------------------W---------------------------------------------LG---TRNIRNILSSASADKQVKIWDISTVQ

Query:  CDITMQHHTDKVCIPASCTDLDLKILFPAF---------------------------------TIHSILCSLEDGTVKGF--------------------
        C+ITMQHHTDKV   A        +L  +F                                 T H  + SLEDGTVKGF                    
Subjt:  CDITMQHHTDKVCIPASCTDLDLKILFPAF---------------------------------TIHSILCSLEDGTVKGF--------------------

Query:  --VKSFCTLS------------NIKGLV-------YKPSCVASTDLKAGAVFSISFSEDCPFLLS
           K+ C+++            +   +V        +PSCVAST+ KAGAVFS+SFSEDCPFL++
Subjt:  --VKSFCTLS------------NIKGLV-------YKPSCVASTDLKAGAVFSISFSEDCPFLLS

XP_038890811.1 uncharacterized WD repeat-containing protein C17D11.16-like [Benincasa hispida]3.0e-2729.65Show/hide
Query:  MISAVSWVPKGACKPLPVLEDPPTKESIDEFLKFKNVLEDSSKHSDDEVDQEDMDVEDAGDE-----------------------------------DMD
        MISAVSWVPKG CKPLP L DPP+KE+IDE LK K+V++DSSKHSDDE D+ DMDVEDA DE                                   DMD
Subjt:  MISAVSWVPKGACKPLPVLEDPPTKESIDEFLKFKNVLEDSSKHSDDEVDQEDMDVEDAGDE-----------------------------------DMD

Query:  RYDNEDDGV-----------------------------------LISPSSGL------TSHVALLYRTVTR-----------------------TRYLD-
         YD+EDD +                                    I P+  +        +V+ L   +                         T +LD 
Subjt:  RYDNEDDGV-----------------------------------LISPSSGL------TSHVALLYRTVTR-----------------------TRYLD-

Query:  ----------------------W------------------------------------------LG---TRNIRNILSSASADKQVKIWDISTVQCDIT
                              W                                          LG    +  RNIL+SASADKQVKIWD+ST QC+IT
Subjt:  ----------------------W------------------------------------------LG---TRNIRNILSSASADKQVKIWDISTVQCDIT

Query:  MQHHTDKVCIPA----------------------------------SCTDLDLKILFPAFTIHSILCSLEDGTVKGF----------------------V
        MQHHTDKV   A                                     D++  +++   T H  + SLEDGTVKGF                       
Subjt:  MQHHTDKVCIPA----------------------------------SCTDLDLKILFPAFTIHSILCSLEDGTVKGF----------------------V

Query:  KSFCTLS---NIKGLV----------------YKPSCVASTDLKAGAVFSISFSEDCPFLLS
        K+ C++S   +   L+                 +PSCVAST+LK GAVFS++FSEDCPFLL+
Subjt:  KSFCTLS---NIKGLV----------------YKPSCVASTDLKAGAVFSISFSEDCPFLLS

TrEMBL top hitse value%identityAlignment
A0A0A0LH54 WD_REPEATS_REGION domain-containing protein4.2e-2729.65Show/hide
Query:  MISAVSWVPKGACKPLPVLEDPPTKESIDEFLKFKNVLEDSSKHSDDEVDQEDMDVEDAGDE-----------------------------------DMD
        MISAVSWVPKG CKPLP L DPP++E+ID+ LK   V+EDSSKHSDDE D+EDMDVEDA DE                                   DMD
Subjt:  MISAVSWVPKGACKPLPVLEDPPTKESIDEFLKFKNVLEDSSKHSDDEVDQEDMDVEDAGDE-----------------------------------DMD

Query:  RYDNEDD---------GVLISPSSGLTSHVA-------------------------------------------------LLYRTV------TRTRYLD-
         YDNEDD         G +  PS+ +  ++                                                   ++R +        T +LD 
Subjt:  RYDNEDD---------GVLISPSSGLTSHVA-------------------------------------------------LLYRTV------TRTRYLD-

Query:  ----------------------W-------------------------------------------LG---TRNIRNILSSASADKQVKIWDISTVQCDI
                              W                                           LG    +  RNIL+SASADKQVKIWD+ST QC+I
Subjt:  ----------------------W-------------------------------------------LG---TRNIRNILSSASADKQVKIWDISTVQCDI

Query:  TMQHHTDKVCIPASCTDLDLKILFPAF---------------------------------TIHSILCSLEDGTVKGF----------------------V
        TMQHH DKV   A        +L  +F                                 T H  + SLEDGTVKGF                       
Subjt:  TMQHHTDKVCIPASCTDLDLKILFPAF---------------------------------TIHSILCSLEDGTVKGF----------------------V

Query:  KSFCTLS---NIKGLV----------------YKPSCVASTDLKAGAVFSISFSEDCPFLLS
        K+ C++S   +   L+                 +PSC+AST+ KAGAVFS+SFSEDCPFLL+
Subjt:  KSFCTLS---NIKGLV----------------YKPSCVASTDLKAGAVFSISFSEDCPFLLS

A0A1S3BUS3 periodic tryptophan protein 1 homolog1.2e-2629.65Show/hide
Query:  MISAVSWVPKGACKPLPVLEDPPTKESIDEFLKFKNVLEDSSKHSDDEVDQEDMDVEDAGDE-----------------------------------DMD
        MISAVSWVPKG CKP+P L DPP++E IDE LK   V+EDSSKHSDDE D+EDMDVED  DE                                   DMD
Subjt:  MISAVSWVPKGACKPLPVLEDPPTKESIDEFLKFKNVLEDSSKHSDDEVDQEDMDVEDAGDE-----------------------------------DMD

Query:  RYDNEDD---------GVLISPSSGLTSHVA-------------------------------------------------LLYRTV------TRTRYLD-
         YDNEDD         G +  PS+ +  ++                                                   ++R +        T +LD 
Subjt:  RYDNEDD---------GVLISPSSGLTSHVA-------------------------------------------------LLYRTV------TRTRYLD-

Query:  ----------------------W-------------------------------------------LG---TRNIRNILSSASADKQVKIWDISTVQCDI
                              W                                           LG    +  RNIL+SASADKQVKIWD+ T QC+I
Subjt:  ----------------------W-------------------------------------------LG---TRNIRNILSSASADKQVKIWDISTVQCDI

Query:  TMQHHTDKVCIPASCTDLDLKILFPAF---------------------------------TIHSILCSLEDGTVKGF----------------------V
        TMQHHTDKV   A        +L  +F                                 T H  + SLEDGTVKGF                       
Subjt:  TMQHHTDKVCIPASCTDLDLKILFPAF---------------------------------TIHSILCSLEDGTVKGF----------------------V

Query:  KSFCTLS---NIKGLV----------------YKPSCVASTDLKAGAVFSISFSEDCPFLLS
        K+ C++S   +   L+                 +PSCVAST+ KAGAVFS+SFSEDCPFLL+
Subjt:  KSFCTLS---NIKGLV----------------YKPSCVASTDLKAGAVFSISFSEDCPFLLS

A0A6J1C2R2 uncharacterized WD repeat-containing protein C17D11.163.3e-2429.09Show/hide
Query:  MISAVSWVPKGACKPLPVLEDPPTKESIDEFLKFKNVLEDSSKHSDDEVD----QEDMDVEDAGDE----------------------------------
        MIS +SWVPKG CKPLPV+ DPP+KE+IDE LK K+VLE+SSKHSDDE+D     + MDV+D+ DE                                  
Subjt:  MISAVSWVPKGACKPLPVLEDPPTKESIDEFLKFKNVLEDSSKHSDDEVD----QEDMDVEDAGDE----------------------------------

Query:  -DMDRYDNEDD---------GVLISPSSGL------------------------------------------------------TSHVALLYRTVTRTRY
         DMD YD+EDD         G L  PS+ +                                                        H  ++      T +
Subjt:  -DMDRYDNEDD---------GVLISPSSGL------------------------------------------------------TSHVALLYRTVTRTRY

Query:  LD-----------------------W------------------------------------------LG---TRNIRNILSSASADKQVKIWDISTVQC
        LD                       W                                          LG    +  RNIL+SASADKQVKIWD+ST QC
Subjt:  LD-----------------------W------------------------------------------LG---TRNIRNILSSASADKQVKIWDISTVQC

Query:  DITMQHHTDKVCIPASCTDLDLKILFPAF---------------------------------TIHSILCSLEDGTVKGF---------------------
        DI MQHHTDKV   A        +L  +F                                 T H  + SLEDGTVK F                     
Subjt:  DITMQHHTDKVCIPASCTDLDLKILFPAF---------------------------------TIHSILCSLEDGTVKGF---------------------

Query:  -VKSFCTLS------------NIKGLV-------YKPSCVASTDLKAGAVFSISFSEDCPFLLS
          K+ C++S            +   +V        +PSCVAST+ KAGAVFS+SFSEDCPFLL+
Subjt:  -VKSFCTLS------------NIKGLV-------YKPSCVASTDLKAGAVFSISFSEDCPFLLS

A0A6J1EZ45 uncharacterized WD repeat-containing protein C17D11.161.2e-2629.68Show/hide
Query:  MISAVSWVPKGACKPLPVLEDPPTKESIDEFLKFKNVL-EDSSKHSDDEVDQEDMDVEDAGDE-----------------------------------DM
        MISAVSWVPKG CKPLPV  DPP+KE+IDE LK K+VL EDSSKHS+DEVD+EDMDVEDA DE                                   DM
Subjt:  MISAVSWVPKGACKPLPVLEDPPTKESIDEFLKFKNVL-EDSSKHSDDEVDQEDMDVEDAGDE-----------------------------------DM

Query:  DRYDNEDDGV-----------------------------------LISPSSGL-----------------------------TSHVALLYRTVTRTRYLD
        D YD+EDD +                                    I P+  +                               H  ++      T +LD
Subjt:  DRYDNEDDGV-----------------------------------LISPSSGL-----------------------------TSHVALLYRTVTRTRYLD

Query:  -----------------------W---------------------------------------------LG---TRNIRNILSSASADKQVKIWDISTVQ
                               W                                             LG    +  RNIL+SASADKQVKIWD+ST +
Subjt:  -----------------------W---------------------------------------------LG---TRNIRNILSSASADKQVKIWDISTVQ

Query:  CDITMQHHTDKVCIPASCTDLDLKILFPAF---------------------------------TIHSILCSLEDGTVKGF--------------------
        C+ITMQHHTDKV   A        +L  +F                                 T H  + SLEDGTVKGF                    
Subjt:  CDITMQHHTDKVCIPASCTDLDLKILFPAF---------------------------------TIHSILCSLEDGTVKGF--------------------

Query:  --VKSFCTLS------------NIKGLV-------YKPSCVASTDLKAGAVFSISFSEDCPFLLS
           K+ C+++            +   +V        +PSCVAST+ KAGAVFS+SFSEDCPFL++
Subjt:  --VKSFCTLS------------NIKGLV-------YKPSCVASTDLKAGAVFSISFSEDCPFLLS

A0A6J1KY07 uncharacterized WD repeat-containing protein C17D11.161.6e-2629.68Show/hide
Query:  MISAVSWVPKGACKPLPVLEDPPTKESIDEFLKFKNVL-EDSSKHSDDEVDQEDMDVEDAGDE-----------------------------------DM
        MISAVSWVPKG CKPLPV  DPP+KE+IDE LK K+VL EDSSKHS+DEVD+EDMDVEDA DE                                   DM
Subjt:  MISAVSWVPKGACKPLPVLEDPPTKESIDEFLKFKNVL-EDSSKHSDDEVDQEDMDVEDAGDE-----------------------------------DM

Query:  DRYDNEDDGV-----------------------------------LISPSSGL-----------------------------TSHVALLYRTVTRTRYLD
        D YD+EDD +                                    I P+  +                               H  ++      T +LD
Subjt:  DRYDNEDDGV-----------------------------------LISPSSGL-----------------------------TSHVALLYRTVTRTRYLD

Query:  -----------------------W---------------------------------------------LG---TRNIRNILSSASADKQVKIWDISTVQ
                               W                                             LG    +  RNIL+SASADKQVKIWD+ST +
Subjt:  -----------------------W---------------------------------------------LG---TRNIRNILSSASADKQVKIWDISTVQ

Query:  CDITMQHHTDKVCIPASCTDLDLKILFPAF---------------------------------TIHSILCSLEDGTVKGF--------------------
        C+ITMQHHTDKV   A        +L  +F                                 T H  + SLEDGTVKGF                    
Subjt:  CDITMQHHTDKVCIPASCTDLDLKILFPAF---------------------------------TIHSILCSLEDGTVKGF--------------------

Query:  --VKSFCTLS------------NIKGLV-------YKPSCVASTDLKAGAVFSISFSEDCPFLLS
           K+ C+++            +   +V        +PSCVAST+ KAGAVFS+SFSEDCPFL++
Subjt:  --VKSFCTLS------------NIKGLV-------YKPSCVASTDLKAGAVFSISFSEDCPFLLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G18900.1 Transducin/WD40 repeat-like superfamily protein1.1e-1128.96Show/hide
Query:  YRTVTRTR-YLDWLGTRNIRNILSSASADKQVKIWDISTVQCDITMQHHTDKVCIPA----------------------------------SCTDLDLKI
        Y+  + TR  L     +  RNIL+SASADK+VK+WD++T  C ITM+HHT +V   A                                    +D++  +
Subjt:  YRTVTRTR-YLDWLGTRNIRNILSSASADKQVKIWDISTVQCDITMQHHTDKVCIPA----------------------------------SCTDLDLKI

Query:  LFPAFTIHSILCSLEDGTVKGFVKSFCTLS--------NIKG-------LVY-------------------------KPSCVASTDLKAGAVFSISFSED
         +   + HS + SLEDGTVKGF     ++S         I G       + Y                         +PSC+A+ +  AG +F I+FS D
Subjt:  LFPAFTIHSILCSLEDGTVKGFVKSFCTLS--------NIKG-------LVY-------------------------KPSCVASTDLKAGAVFSISFSED

Query:  CPFLLSRLQGQIGVSYTVKTW
         PFLL+      GV   +K W
Subjt:  CPFLLSRLQGQIGVSYTVKTW

AT4G18905.1 Transducin/WD40 repeat-like superfamily protein1.7e-1229.02Show/hide
Query:  RNIRNILSSASADKQVKIWDISTVQCDITMQHHTDKVCIPA----------------------------------SCTDLDLKILFPAFTIHSILCSLED
        +  RNIL+SASADK+VK+WD++T  C ITM+HHT +V   A                                    +D++  + +     HS + SLED
Subjt:  RNIRNILSSASADKQVKIWDISTVQCDITMQHHTDKVCIPA----------------------------------SCTDLDLKILFPAFTIHSILCSLED

Query:  GTVKGF------------------VKSFCTLSNIKGLVY-------------------------KPSCVASTDLKAGAVFSISFSEDCPFLLS
        GTVKGF                  +++      +  + Y                         +PSC+A+    AGAVFSISF+ D PFLL+
Subjt:  GTVKGF------------------VKSFCTLSNIKGLVY-------------------------KPSCVASTDLKAGAVFSISFSEDCPFLLS

AT4G18905.1 Transducin/WD40 repeat-like superfamily protein8.4e-0432.79Show/hide
Query:  MISAVSWVPKGACKPLPVLEDPPTKESIDEFLK---FKNVLEDSSKHSDDEVDQEDMDVED
        MI+AVSW+PKG  K +P + +PP+KE + E ++   F   +E S++  ++E++++  ++ +
Subjt:  MISAVSWVPKGACKPLPVLEDPPTKESIDEFLK---FKNVLEDSSKHSDDEVDQEDMDVED

AT4G18905.2 Transducin/WD40 repeat-like superfamily protein5.8e-1328.83Show/hide
Query:  ISPSSGLTSHVALLYRTVTRTRYLDWLGTRNIRNILSSASADKQVKIWDISTVQCDITMQHHTDKVCIPA------------------------------
        IS SS  +SH   +         L W   +  RNIL+SASADK+VK+WD++T  C ITM+HHT +V   A                              
Subjt:  ISPSSGLTSHVALLYRTVTRTRYLDWLGTRNIRNILSSASADKQVKIWDISTVQCDITMQHHTDKVCIPA------------------------------

Query:  ----SCTDLDLKILFPAFTIHSILCSLEDGTVKGF------------------VKSFCTLSNIKGLVY-------------------------KPSCVAS
              +D++  + +     HS + SLEDGTVKGF                  +++      +  + Y                         +PSC+A+
Subjt:  ----SCTDLDLKILFPAFTIHSILCSLEDGTVKGF------------------VKSFCTLSNIKGLVY-------------------------KPSCVAS

Query:  TDLKAGAVFSISFSEDCPFLLS
            AGAVFSISF+ D PFLL+
Subjt:  TDLKAGAVFSISFSEDCPFLLS

AT4G18905.2 Transducin/WD40 repeat-like superfamily protein8.4e-0432.79Show/hide
Query:  MISAVSWVPKGACKPLPVLEDPPTKESIDEFLK---FKNVLEDSSKHSDDEVDQEDMDVED
        MI+AVSW+PKG  K +P + +PP+KE + E ++   F   +E S++  ++E++++  ++ +
Subjt:  MISAVSWVPKGACKPLPVLEDPPTKESIDEFLK---FKNVLEDSSKHSDDEVDQEDMDVED

AT4G35370.1 Transducin/WD40 repeat-like superfamily protein5.8e-1328.22Show/hide
Query:  LDWLGTRNIRNILSSASADKQVKIWDISTVQCDITMQHHTDKVCIPA---------------------------------SCTDLDLKILFPAFTIHSIL
        +D    +  RNI++S S DK+VK+WD++T +C +TM+HH  KV   A                                 S      K+ +   + HS +
Subjt:  LDWLGTRNIRNILSSASADKQVKIWDISTVQCDITMQHHTDKVCIPA---------------------------------SCTDLDLKILFPAFTIHSIL

Query:  CSLEDGTVKGFVKSFCTL----------SNIKGLVY-------------------------KPSCVASTDLKAGAVFSISFSEDCPFLLSRLQGQIGVSY
         SL+DGTVKGF      L          S +  + Y                         +PS +A+    AG VFS+SFS DCPFLL+ + G  G++ 
Subjt:  CSLEDGTVKGFVKSFCTL----------SNIKGLVY-------------------------KPSCVASTDLKAGAVFSISFSEDCPFLLSRLQGQIGVSY

Query:  TV
        +V
Subjt:  TV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATATCAGCGGTTTCGTGGGTTCCTAAAGGGGCTTGTAAGCCTCTTCCAGTCCTGGAAGATCCTCCCACCAAGGAGTCTATTGATGAATTCCTCAAGTTCAAGAATGT
CTTGGAGGATTCCAGCAAACATAGTGATGATGAGGTCGATCAAGAAGATATGGATGTTGAAGACGCTGGTGATGAAGATATGGACCGTTATGATAATGAAGATGATGGTG
TTCTCATCTCCCCTTCCTCTGGTTTAACTTCTCATGTTGCTCTTTTATACAGGACAGTCACACGGACTCGATACTTGGACTGGCTTGGAACAAGGAATATAAGGAATATA
CTATCTAGTGCAAGTGCTGACAAGCAAGTCAAGATTTGGGACATATCTACTGTACAATGTGATATAACTATGCAGCATCATACAGACAAGGTGTGTATTCCTGCTTCTTG
CACAGATCTGGATTTGAAGATTCTTTTTCCCGCCTTCACAATCCACTCAATATTGTGCAGCCTAGAGGATGGTACAGTGAAAGGTTTTGTGAAAAGTTTTTGCACTTTAA
GCAATATAAAGGGACTCGTTTACAAGCCTTCATGTGTGGCATCCACGGATCTTAAAGCAGGAGCTGTGTTTTCGATTTCCTTCTCAGAAGATTGTCCCTTTTTGCTGTCT
AGGCTCCAAGGGCAAATTGGAGTTAGTTATACTGTCAAAACATGGGTGAAAATGAAAATTGGATTCCATATTCATAACTCGTCCTTGAAAGGCTGA
mRNA sequenceShow/hide mRNA sequence
AAAAAAGAAAAAGTTGGGCTCACATTTTGATATTCCAAATTTATCCTTCCCATATTTGAAGTTCCCAATCATTACGCACCGTTTTAACTCAGCGGTTCGCCCTACCCGCC
ACCGCCACCGCCACTGTTCTCTCTTTCCTTTCTTTTCTTGTCTCGTTAGGCTGCCATTGTTGTGAACTCTGTCACTTCAGTTTATTTCCCCCTAAAACCTTCCTACCAAC
TCTCACCTTTAAAAGAAAATGATATCAGCGGTTTCGTGGGTTCCTAAAGGGGCTTGTAAGCCTCTTCCAGTCCTGGAAGATCCTCCCACCAAGGAGTCTATTGATGAATT
CCTCAAGTTCAAGAATGTCTTGGAGGATTCCAGCAAACATAGTGATGATGAGGTCGATCAAGAAGATATGGATGTTGAAGACGCTGGTGATGAAGATATGGACCGTTATG
ATAATGAAGATGATGGTGTTCTCATCTCCCCTTCCTCTGGTTTAACTTCTCATGTTGCTCTTTTATACAGGACAGTCACACGGACTCGATACTTGGACTGGCTTGGAACA
AGGAATATAAGGAATATACTATCTAGTGCAAGTGCTGACAAGCAAGTCAAGATTTGGGACATATCTACTGTACAATGTGATATAACTATGCAGCATCATACAGACAAGGT
GTGTATTCCTGCTTCTTGCACAGATCTGGATTTGAAGATTCTTTTTCCCGCCTTCACAATCCACTCAATATTGTGCAGCCTAGAGGATGGTACAGTGAAAGGTTTTGTGA
AAAGTTTTTGCACTTTAAGCAATATAAAGGGACTCGTTTACAAGCCTTCATGTGTGGCATCCACGGATCTTAAAGCAGGAGCTGTGTTTTCGATTTCCTTCTCAGAAGAT
TGTCCCTTTTTGCTGTCTAGGCTCCAAGGGCAAATTGGAGTTAGTTATACTGTCAAAACATGGGTGAAAATGAAAATTGGATTCCATATTCATAACTCGTCCTTGAAAGG
CTGAAAAAGGGCGACTTTTCAGAACTCTCTATATTGGTATATTCTCGTCACAACATGATTGGATGGATCACAGGTGAATGGAAAAGTTGAAAAGTGAACTTTACCCTTAG
CTCTTCTTTGTTAAGCCTCAAACTTCTTATTTTGATCCGTGAATCCAAAAATCTGCCTAGAGGAAGGAAAAAAAAGGAAAAAAATAATCGTCATTGGTGCATTGGTGGAG
GTGCCATTGGATAAGCAACTGGCATAACATAAGGAGGATGGGGATGCATTCCATGAGGAAGCATCACCGGAGTGCCAACCGCCGATGCCATGTGCCCCGGAGGAGCTGCC
ACTGGATGCCCAACAGGTGCCCCATACATGCCTATTCCGGGCAGATGCTGCTGAGGCCGGTGCTTCCCTGGTGGCCCCAGAGCCGGTGGATTACTCTGGTTCGTGCCATT
TGTTTGGTGGCCAGTGATTGGAGCTTGATGGGACATGACGTCGCCACCACCGCCATTATTAACTGAGTTCATATCAGGATTCAGAGTCAGCCACCGTTTTGTACATAAAC
AGGTGAGTTGGGAGGGAAGCTGAAGCTGAAGCTGAAATGTGTGTGTCTATCGCTATACGTGGTCTATTCTCCACTTCAGGTTTTTTACCCCTAACTTCACCACACAAAAT
ATTCAAGGATCATGTCCACCTCCTTTGATAGTGACAGAAAGAGAGAGGACTGATAGGCCTACTTCTTCTTCCTTCTTATTTATATTTTATTTTTGGACAAATTGCAAAAA
CTACTCTGAAGTATGGGACCCTTATATTTACATAATTGCATAAATTGTAACAATGGTATAAGTTTGAGAGTTCAATTTTTATCCTTTGGAGGTCCAATTTCTACAACTAT
TATAAGTTGGAGTGTTAATTTTAACACTTATATAAATTTGAGAGCTCAATTGTTACCATTAAAAGTTTGAGGGTGGGTAGTTTTTGTAATTTGCCCTTTTATTTGTATTT
ATTTTTGGTCAAGTTGCAAAAACTACCCTTGAAGTATGGTTGTAATTGCAATTATACCCTTAAACTTTCAATCGTATACTTGAGCCCTTAAATTGAACCTTTAAACTTAT
AATAGTCGTAGAAATTGGACTTCCAAATGAAAAAAGAAAAAAAAAACTTCAAACTTGTATAATTGTTACAATTTCTACAATTATGTAAATTTGAGGGTCCAATTTTAACA
CTTGTATACGTTTGAAAGCTCAATCTTTAAAATTGAAAGTTTGAGGGTGTAATTGTAACTACTACCTTATTTTAGGGGTGGTCTTTGTAATTGGCCCTTTATTTGATTTT
TATTCTCTATATATATATTCTTTAGTTGAGTCCATTGGAGGCCAACTTGGTTTGGATATTATAATTTGATCAACAAATGCATTCACAATACCAAA
Protein sequenceShow/hide protein sequence
MISAVSWVPKGACKPLPVLEDPPTKESIDEFLKFKNVLEDSSKHSDDEVDQEDMDVEDAGDEDMDRYDNEDDGVLISPSSGLTSHVALLYRTVTRTRYLDWLGTRNIRNI
LSSASADKQVKIWDISTVQCDITMQHHTDKVCIPASCTDLDLKILFPAFTIHSILCSLEDGTVKGFVKSFCTLSNIKGLVYKPSCVASTDLKAGAVFSISFSEDCPFLLS
RLQGQIGVSYTVKTWVKMKIGFHIHNSSLKG