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Lsi06G013530 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G013530
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCLAVATA3/ESR (CLE)-related protein 13
Genome locationchr06:24120103..24120297
RNA-Seq ExpressionLsi06G013530
SyntenyLsi06G013530
Gene Ontology termsGO:0005615 - extracellular space (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR039618 - CLAVATA3/ESR (CLE)-related protein 9/10/11/12/13


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXC28057.1 hypothetical protein L484_022293 [Morus notabilis]8.4e-1162.5Show/hide
Query:  MSSKFDFTIFLQHLQADHHHHHHHRHHHHHRHDHGDSPGTAAEIDPRYGVEKRLVPTGPNPLHH
        ++SK +FT FL+     H HHHH  HHH H+H   D  G  +EIDPRYGVEKRLVPTGPNPLHH
Subjt:  MSSKFDFTIFLQHLQADHHHHHHHRHHHHHRHDHGDSPGTAAEIDPRYGVEKRLVPTGPNPLHH

KAE9609678.1 hypothetical protein Lalb_Chr07g0178581 [Lupinus albus]4.2e-1064.62Show/hide
Query:  MSSKFDFTIFLQHLQADHHHHHHHRHHHHHRHDHGDSPGTA-AEIDPRYGVEKRLVPTGPNPLHH
        +++ FDFT FL H    HHH HHHRHHHH+ +     P  A +EIDPRYGVEKRLVPTGPNPLHH
Subjt:  MSSKFDFTIFLQHLQADHHHHHHHRHHHHHRHDHGDSPGTA-AEIDPRYGVEKRLVPTGPNPLHH

OVA05043.1 hypothetical protein BVC80_1211g119 [Macleaya cordata]5.0e-1167.19Show/hide
Query:  SSKFDFTIFLQHLQADHHHHHHHRHHHHHRHDHGDSPGT-AAEIDPRYGVEKRLVPTGPNPLHH
        S+KFDFT F +H    HHHHHHH HH+HH       PG+   EIDPRYGVEKRLVPTGPNPLHH
Subjt:  SSKFDFTIFLQHLQADHHHHHHHRHHHHHRHDHGDSPGT-AAEIDPRYGVEKRLVPTGPNPLHH

THG07355.1 hypothetical protein TEA_025860 [Camellia sinensis var. sinensis]2.5e-1064.06Show/hide
Query:  MSSKFDFTIFLQHLQADHHHHHHHRHHHHHRHDHGDSPGTAAEIDPRYGVEKRLVPTGPNPLHH
        ++SKFDFT FL+H     HHH+HHRHHHHH  D        +E+DPRYGVEKR VPTGPNPLHH
Subjt:  MSSKFDFTIFLQHLQADHHHHHHHRHHHHHRHDHGDSPGTAAEIDPRYGVEKRLVPTGPNPLHH

XP_020098071.1 protein FON2 SPARE1-like [Ananas comosus]7.2e-1055.26Show/hide
Query:  KFDFTIFLQHLQA--DHHHHHHHRHHHHHRHDH-------------GDSPGTAAEIDPRYGVEKRLVPTGPNPLHH
        KFD + F    Q+  DHHHHHHH HHHHH H H               +P    EIDPRYGV+KRLVPTGPNPLHH
Subjt:  KFDFTIFLQHLQA--DHHHHHHHRHHHHHRHDH-------------GDSPGTAAEIDPRYGVEKRLVPTGPNPLHH

TrEMBL top hitse value%identityAlignment
A0A200Q3L1 Uncharacterized protein2.4e-1167.19Show/hide
Query:  SSKFDFTIFLQHLQADHHHHHHHRHHHHHRHDHGDSPGT-AAEIDPRYGVEKRLVPTGPNPLHH
        S+KFDFT F +H    HHHHHHH HH+HH       PG+   EIDPRYGVEKRLVPTGPNPLHH
Subjt:  SSKFDFTIFLQHLQADHHHHHHHRHHHHHRHDHGDSPGT-AAEIDPRYGVEKRLVPTGPNPLHH

A0A4S4DWZ0 Uncharacterized protein1.2e-1064.06Show/hide
Query:  MSSKFDFTIFLQHLQADHHHHHHHRHHHHHRHDHGDSPGTAAEIDPRYGVEKRLVPTGPNPLHH
        ++SKFDFT FL+H     HHH+HHRHHHHH  D        +E+DPRYGVEKR VPTGPNPLHH
Subjt:  MSSKFDFTIFLQHLQADHHHHHHHRHHHHHRHDHGDSPGTAAEIDPRYGVEKRLVPTGPNPLHH

A0A6A4Q706 Uncharacterized protein2.0e-1064.62Show/hide
Query:  MSSKFDFTIFLQHLQADHHHHHHHRHHHHHRHDHGDSPGTA-AEIDPRYGVEKRLVPTGPNPLHH
        +++ FDFT FL H    HHH HHHRHHHH+ +     P  A +EIDPRYGVEKRLVPTGPNPLHH
Subjt:  MSSKFDFTIFLQHLQADHHHHHHHRHHHHHRHDHGDSPGTA-AEIDPRYGVEKRLVPTGPNPLHH

M0ZJR5 CLE122.7e-1062.5Show/hide
Query:  MSSKFDFTIFLQHLQADHHHHHHHRHHHHHRHDHGDSPGTAAEIDPRYGVEKRLVPTGPNPLHH
        ++S FDFT F++H+     HHHHH HHHHH+ D  + P  + EID RYGVEKRLVPTGPNPLHH
Subjt:  MSSKFDFTIFLQHLQADHHHHHHHRHHHHHRHDHGDSPGTAAEIDPRYGVEKRLVPTGPNPLHH

W9SUW2 Uncharacterized protein4.1e-1162.5Show/hide
Query:  MSSKFDFTIFLQHLQADHHHHHHHRHHHHHRHDHGDSPGTAAEIDPRYGVEKRLVPTGPNPLHH
        ++SK +FT FL+     H HHHH  HHH H+H   D  G  +EIDPRYGVEKRLVPTGPNPLHH
Subjt:  MSSKFDFTIFLQHLQADHHHHHHHRHHHHHRHDHGDSPGTAAEIDPRYGVEKRLVPTGPNPLHH

SwissProt top hitse value%identityAlignment
A2X462 Protein FON2 SPARE11.3e-0964.81Show/hide
Query:  HHHHHHHRHHHHHRHDHGDS---PGTAA----EIDPRYGVEKRLVPTGPNPLHH
        HHHH HH HHHH  HD  +    P TAA    E+DPR+GV+KRLVPTGPNPLHH
Subjt:  HHHHHHHRHHHHHRHDHGDS---PGTAA----EIDPRYGVEKRLVPTGPNPLHH

Q29PU4 CLAVATA3/ESR (CLE)-related protein 121.9e-0548.44Show/hide
Query:  MSSKFDFTIFLQHLQADHHHHHHHRHHHHHRHDHGDSPGTAAEIDPRYGVEKRLVPTGPNPLHH
        +S +FDFT F            H R +  H H  G+      EIDPRYGVEKR VP+GPNPLHH
Subjt:  MSSKFDFTIFLQHLQADHHHHHHHRHHHHHRHDHGDSPGTAAEIDPRYGVEKRLVPTGPNPLHH

Q6NMF0 CLAVATA3/ESR (CLE)-related protein 137.7e-0750Show/hide
Query:  FDFTIFLQHLQADHHHHHHHRHHHHHRHDHGDSPGTAAEIDPRYGVEKRLVPTGPNPLHH
        FDFT FL+ L+  +H                  P   +EIDPRYGVEKRLVP+GPNPLHH
Subjt:  FDFTIFLQHLQADHHHHHHHRHHHHHRHDHGDSPGTAAEIDPRYGVEKRLVPTGPNPLHH

Q6Z6T2 Inactive protein FON2 SPARE11.3e-0964.81Show/hide
Query:  HHHHHHHRHHHHHRHDHGDS---PGTAA----EIDPRYGVEKRLVPTGPNPLHH
        HHHH HH HHHH  HD  +    P TAA    E+DPR+GV+KRLVPTGPNPLHH
Subjt:  HHHHHHHRHHHHHRHDHGDS---PGTAA----EIDPRYGVEKRLVPTGPNPLHH

Arabidopsis top hitse value%identityAlignment
AT1G26600.1 CLAVATA3/ESR-RELATED 93.9e-0686.36Show/hide
Query:  EIDPRYGVEKRLVPTGPNPLHH
        EIDPRYGV+KRLVP+GPNPLH+
Subjt:  EIDPRYGVEKRLVPTGPNPLHH

AT1G68795.1 CLAVATA3/ESR-RELATED 121.3e-0648.44Show/hide
Query:  MSSKFDFTIFLQHLQADHHHHHHHRHHHHHRHDHGDSPGTAAEIDPRYGVEKRLVPTGPNPLHH
        +S +FDFT F            H R +  H H  G+      EIDPRYGVEKR VP+GPNPLHH
Subjt:  MSSKFDFTIFLQHLQADHHHHHHHRHHHHHRHDHGDSPGTAAEIDPRYGVEKRLVPTGPNPLHH

AT1G69320.1 CLAVATA3/ESR-RELATED 103.7e-0457.5Show/hide
Query:  RHHHHHRHDHGDSPGTAAEIDPRYGVEKRLVPTGPNPLHH
        R H   R      P    EID RYGVEKRLVP+GPNPLH+
Subjt:  RHHHHHRHDHGDSPGTAAEIDPRYGVEKRLVPTGPNPLHH

AT1G73965.1 CLAVATA3/ESR-RELATED 135.5e-0850Show/hide
Query:  FDFTIFLQHLQADHHHHHHHRHHHHHRHDHGDSPGTAAEIDPRYGVEKRLVPTGPNPLHH
        FDFT FL+ L+  +H                  P   +EIDPRYGVEKRLVP+GPNPLHH
Subjt:  FDFTIFLQHLQADHHHHHHHRHHHHHRHDHGDSPGTAAEIDPRYGVEKRLVPTGPNPLHH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCCAAATTTGATTTCACCATCTTTCTTCAACATCTCCAAGCTGATCACCACCACCACCATCACCACCGTCATCACCATCACCACCGTCACGATCACGGTGATTC
TCCCGGCACTGCAGCGGAGATTGATCCCCGGTACGGCGTCGAAAAACGCCTCGTCCCAACTGGTCCAAATCCATTGCACCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCCAAATTTGATTTCACCATCTTTCTTCAACATCTCCAAGCTGATCACCACCACCACCATCACCACCGTCATCACCATCACCACCGTCACGATCACGGTGATTC
TCCCGGCACTGCAGCGGAGATTGATCCCCGGTACGGCGTCGAAAAACGCCTCGTCCCAACTGGTCCAAATCCATTGCACCATTGA
Protein sequenceShow/hide protein sequence
MSSKFDFTIFLQHLQADHHHHHHHRHHHHHRHDHGDSPGTAAEIDPRYGVEKRLVPTGPNPLHH