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Lsi06G013770 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G013770
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionsuppressor of phytochrome b 5
Genome locationchr06:24354918..24355337
RNA-Seq ExpressionLsi06G013770
SyntenyLsi06G013770
Gene Ontology termsGO:0009691 - cytokinin biosynthetic process (biological process)
InterPro domainsIPR044670 - SOB-five-Like (SOFL) family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022135291.1 uncharacterized protein LOC111007289 isoform X1 [Momordica charantia]3.7e-3565.64Show/hide
Query:  MEPSQIFGVSEECHSSESGWTMYIGSPANDSSDAASD---------DEDEEHKGYYYAANNQDDSDDSMASDASSGPSHHHQQQQQHQFKG-----MKNP
        MEPSQIFGV+EECHSSESGWTMYIGSPA  SSDA +D         DEDE+   Y    NNQD+SDDSMASDASSGPSH    Q  H F G       NP
Subjt:  MEPSQIFGVSEECHSSESGWTMYIGSPANDSSDAASD---------DEDEEHKGYYYAANNQDDSDDSMASDASSGPSHHHQQQQQHQFKG-----MKNP

Query:  HG-----EVKFCLETKTKKPLMEKKKQRADRKDVK-----VGQKPKSSVQSSSKVRKNILMGK
        HG     EVKFC ETKTKKPLME  KQRA+RK+VK     VGQKPK+SVQSSSKVRK+I MGK
Subjt:  HG-----EVKFCLETKTKKPLMEKKKQRADRKDVK-----VGQKPKSSVQSSSKVRKNILMGK

XP_022987928.1 uncharacterized protein LOC111485335 isoform X1 [Cucurbita maxima]6.9e-3466.67Show/hide
Query:  MEPSQIFGVSEECHSSESGWTMYIGSP--ANDSSD----AASDDEDEEHKGYYYAANNQDDSDDSMASDASSGPSHHHQQQQQHQFKGMKNP--------
        MEPSQ+FGVSEECHSSESGWTMYIGSP  A+ SSD    AASD+EDEEHKGYY    NQDDSDDSMASDASSGPSH   QQ++H F GMKNP        
Subjt:  MEPSQIFGVSEECHSSESGWTMYIGSP--ANDSSD----AASDDEDEEHKGYYYAANNQDDSDDSMASDASSGPSHHHQQQQQHQFKGMKNP--------

Query:  --HGEVKFCLET----KTKKPLMEKKKQRADRKDVKVGQKPKSSVQSSSKVRKNILMGK
            +   CLET    K KKPL  KKKQRA+RK+VK   +PKSSVQSSSK RK+I MGK
Subjt:  --HGEVKFCLET----KTKKPLMEKKKQRADRKDVKVGQKPKSSVQSSSKVRKNILMGK

XP_022987932.1 uncharacterized protein LOC111485335 isoform X3 [Cucurbita maxima]6.9e-3466.67Show/hide
Query:  MEPSQIFGVSEECHSSESGWTMYIGSP--ANDSSD----AASDDEDEEHKGYYYAANNQDDSDDSMASDASSGPSHHHQQQQQHQFKGMKNP--------
        MEPSQ+FGVSEECHSSESGWTMYIGSP  A+ SSD    AASD+EDEEHKGYY    NQDDSDDSMASDASSGPSH   QQ++H F GMKNP        
Subjt:  MEPSQIFGVSEECHSSESGWTMYIGSP--ANDSSD----AASDDEDEEHKGYYYAANNQDDSDDSMASDASSGPSHHHQQQQQHQFKGMKNP--------

Query:  --HGEVKFCLET----KTKKPLMEKKKQRADRKDVKVGQKPKSSVQSSSKVRKNILMGK
            +   CLET    K KKPL  KKKQRA+RK+VK   +PKSSVQSSSK RK+I MGK
Subjt:  --HGEVKFCLET----KTKKPLMEKKKQRADRKDVKVGQKPKSSVQSSSKVRKNILMGK

XP_031737107.1 uncharacterized protein LOC105434528 [Cucumis sativus]1.8e-4278.57Show/hide
Query:  MEPSQIFGVSEECHSSESGWTMYIGSPAN-DSSDAAS--DDEDEEHKGYYYAANNQDDS-DDSMASDASSGPSHHHQQQQQHQFKGMKNPHGEVKFCLET
        MEPSQIFGVSEECHSSESGWTMYIGSPAN DSSDAAS  DDEDEEHKGYYYAANN +DS DDSMASDASSGP   HQ+   + FKGMKNP+GE+ FCLET
Subjt:  MEPSQIFGVSEECHSSESGWTMYIGSPAN-DSSDAAS--DDEDEEHKGYYYAANNQDDS-DDSMASDASSGPSHHHQQQQQHQFKGMKNPHGEVKFCLET

Query:  --KTKKPLME-KKKQRADRKDVKVGQKPKSSVQSSSKVRK
            +KPLME KKKQRA+RK+V+VGQKPK+SVQSSSK  K
Subjt:  --KTKKPLME-KKKQRADRKDVKVGQKPKSSVQSSSKVRK

XP_038879181.1 protein SOB FIVE-LIKE 3-like [Benincasa hispida]1.1e-5285.11Show/hide
Query:  MEPSQIFGVSEECHSSESGWTMYIGSPANDSSDAAS-DDEDEEHKGYYYAANNQDDS-DDSMASDASSGPSHHHQQQQQHQFKGMKNPHGEVKFCLETKT
        MEPSQIFGVSEECHSSESGWTMYIGSP N SSDAAS DDEDEEHK YYYA NNQDDS DDSMASDASSGP+HH   QQ + FKGMK+P+GE+ FCLETKT
Subjt:  MEPSQIFGVSEECHSSESGWTMYIGSPANDSSDAAS-DDEDEEHKGYYYAANNQDDS-DDSMASDASSGPSHHHQQQQQHQFKGMKNPHGEVKFCLETKT

Query:  KKPLMEKKKQRADRKDVKVGQKPKSSVQSSSKVRKNILMGK
        KKPLMEKKKQRA++K+VKVGQKPKSSVQSSSKVRK+ILMGK
Subjt:  KKPLMEKKKQRADRKDVKVGQKPKSSVQSSSKVRKNILMGK

TrEMBL top hitse value%identityAlignment
A0A0A0LUQ4 Uncharacterized protein5.0e-4679.45Show/hide
Query:  MEPSQIFGVSEECHSSESGWTMYIGSPAN-DSSDAAS--DDEDEEHKGYYYAANNQDDS-DDSMASDASSGPSHHHQQQQQHQFKGMKNPHGEVKFCLET
        MEPSQIFGVSEECHSSESGWTMYIGSPAN DSSDAAS  DDEDEEHKGYYYAANN +DS DDSMASDASSGP   HQ+   + FKGMKNP+GE+ FCLET
Subjt:  MEPSQIFGVSEECHSSESGWTMYIGSPAN-DSSDAAS--DDEDEEHKGYYYAANNQDDS-DDSMASDASSGPSHHHQQQQQHQFKGMKNPHGEVKFCLET

Query:  --KTKKPLME-KKKQRADRKDVKVGQKPKSSVQSSSKVRKNILMGK
            +KPLME KKKQRA+RK+V+VGQKPK+SVQSSSKVRK+ILM K
Subjt:  --KTKKPLME-KKKQRADRKDVKVGQKPKSSVQSSSKVRKNILMGK

A0A6J1C092 uncharacterized protein LOC111007289 isoform X11.8e-3565.64Show/hide
Query:  MEPSQIFGVSEECHSSESGWTMYIGSPANDSSDAASD---------DEDEEHKGYYYAANNQDDSDDSMASDASSGPSHHHQQQQQHQFKG-----MKNP
        MEPSQIFGV+EECHSSESGWTMYIGSPA  SSDA +D         DEDE+   Y    NNQD+SDDSMASDASSGPSH    Q  H F G       NP
Subjt:  MEPSQIFGVSEECHSSESGWTMYIGSPANDSSDAASD---------DEDEEHKGYYYAANNQDDSDDSMASDASSGPSHHHQQQQQHQFKG-----MKNP

Query:  HG-----EVKFCLETKTKKPLMEKKKQRADRKDVK-----VGQKPKSSVQSSSKVRKNILMGK
        HG     EVKFC ETKTKKPLME  KQRA+RK+VK     VGQKPK+SVQSSSKVRK+I MGK
Subjt:  HG-----EVKFCLETKTKKPLMEKKKQRADRKDVK-----VGQKPKSSVQSSSKVRKNILMGK

A0A6J1JBQ3 uncharacterized protein LOC111485335 isoform X33.4e-3466.67Show/hide
Query:  MEPSQIFGVSEECHSSESGWTMYIGSP--ANDSSD----AASDDEDEEHKGYYYAANNQDDSDDSMASDASSGPSHHHQQQQQHQFKGMKNP--------
        MEPSQ+FGVSEECHSSESGWTMYIGSP  A+ SSD    AASD+EDEEHKGYY    NQDDSDDSMASDASSGPSH   QQ++H F GMKNP        
Subjt:  MEPSQIFGVSEECHSSESGWTMYIGSP--ANDSSD----AASDDEDEEHKGYYYAANNQDDSDDSMASDASSGPSHHHQQQQQHQFKGMKNP--------

Query:  --HGEVKFCLET----KTKKPLMEKKKQRADRKDVKVGQKPKSSVQSSSKVRKNILMGK
            +   CLET    K KKPL  KKKQRA+RK+VK   +PKSSVQSSSK RK+I MGK
Subjt:  --HGEVKFCLET----KTKKPLMEKKKQRADRKDVKVGQKPKSSVQSSSKVRKNILMGK

A0A6J1JFR5 uncharacterized protein LOC111485335 isoform X23.4e-3466.67Show/hide
Query:  MEPSQIFGVSEECHSSESGWTMYIGSP--ANDSSD----AASDDEDEEHKGYYYAANNQDDSDDSMASDASSGPSHHHQQQQQHQFKGMKNP--------
        MEPSQ+FGVSEECHSSESGWTMYIGSP  A+ SSD    AASD+EDEEHKGYY    NQDDSDDSMASDASSGPSH   QQ++H F GMKNP        
Subjt:  MEPSQIFGVSEECHSSESGWTMYIGSP--ANDSSD----AASDDEDEEHKGYYYAANNQDDSDDSMASDASSGPSHHHQQQQQHQFKGMKNP--------

Query:  --HGEVKFCLET----KTKKPLMEKKKQRADRKDVKVGQKPKSSVQSSSKVRKNILMGK
            +   CLET    K KKPL  KKKQRA+RK+VK   +PKSSVQSSSK RK+I MGK
Subjt:  --HGEVKFCLET----KTKKPLMEKKKQRADRKDVKVGQKPKSSVQSSSKVRKNILMGK

A0A6J1JKS2 uncharacterized protein LOC111485335 isoform X13.4e-3466.67Show/hide
Query:  MEPSQIFGVSEECHSSESGWTMYIGSP--ANDSSD----AASDDEDEEHKGYYYAANNQDDSDDSMASDASSGPSHHHQQQQQHQFKGMKNP--------
        MEPSQ+FGVSEECHSSESGWTMYIGSP  A+ SSD    AASD+EDEEHKGYY    NQDDSDDSMASDASSGPSH   QQ++H F GMKNP        
Subjt:  MEPSQIFGVSEECHSSESGWTMYIGSP--ANDSSD----AASDDEDEEHKGYYYAANNQDDSDDSMASDASSGPSHHHQQQQQHQFKGMKNP--------

Query:  --HGEVKFCLET----KTKKPLMEKKKQRADRKDVKVGQKPKSSVQSSSKVRKNILMGK
            +   CLET    K KKPL  KKKQRA+RK+VK   +PKSSVQSSSK RK+I MGK
Subjt:  --HGEVKFCLET----KTKKPLMEKKKQRADRKDVKVGQKPKSSVQSSSKVRKNILMGK

SwissProt top hitse value%identityAlignment
Q9FKQ9 Protein SOB FIVE-LIKE 41.8e-0544.19Show/hide
Query:  EECHSSESGWTMYIGSPANDSSDAASDDEDEEHKGY---------YYAANNQDDSDDSMASDASSGPSHH--HQQQQQHQFKGMKN
        EEC SSESGWT Y+ SP     D    DED  ++GY          +      DSDDSMASDASSGP++   HQ+ +    K  KN
Subjt:  EECHSSESGWTMYIGSPANDSSDAASDDEDEEHKGY---------YYAANNQDDSDDSMASDASSGPSHH--HQQQQQHQFKGMKN

Q9LEZ1 Protein SUPPRESSOR OF PHYTOCHROME B 51.4e-0537.74Show/hide
Query:  MEPSQIFGVSEECHSSESGWTMYIGSPANDSSD---AASDDEDEEHKGYYYAANNQDDSDDSMASDASSGPSH-------HHQQQQQHQFKGMKNPHGEV
        ME + IFG  E+C S ESGWTMY+ S ++D  D      DDE+EE            D  DSM SDASSGP           + ++Q+  K  K    E 
Subjt:  MEPSQIFGVSEECHSSESGWTMYIGSPANDSSD---AASDDEDEEHKGYYYAANNQDDSDDSMASDASSGPSH-------HHQQQQQHQFKGMKNPHGEV

Query:  KFCLET
           +ET
Subjt:  KFCLET

Arabidopsis top hitse value%identityAlignment
AT3G30580.1 unknown protein1.2e-0432.8Show/hide
Query:  EECHSSESGWTMYIGSPANDSSDAASDDE-------DEEHKGYYYAANNQDDSDDSMASDASSGPSHHHQQQQQHQFKG--MKNPHGE----VKFCLETK
        EEC SSESGWT YI S   +  +   D+        +++ + Y        DSDDSMASDASSGPS+H    +  + +G  ++N  GE        ++ K
Subjt:  EECHSSESGWTMYIGSPANDSSDAASDDE-------DEEHKGYYYAANNQDDSDDSMASDASSGPSHHHQQQQQHQFKG--MKNPHGE----VKFCLETK

Query:  TKKPLMEKKKQRADRKDVKVGQKPK
            L+ +KK++   ++     K K
Subjt:  TKKPLMEKKKQRADRKDVKVGQKPK

AT5G08150.1 suppressor of phytochrome b 51.0e-0637.74Show/hide
Query:  MEPSQIFGVSEECHSSESGWTMYIGSPANDSSD---AASDDEDEEHKGYYYAANNQDDSDDSMASDASSGPSH-------HHQQQQQHQFKGMKNPHGEV
        ME + IFG  E+C S ESGWTMY+ S ++D  D      DDE+EE            D  DSM SDASSGP           + ++Q+  K  K    E 
Subjt:  MEPSQIFGVSEECHSSESGWTMYIGSPANDSSD---AASDDEDEEHKGYYYAANNQDDSDDSMASDASSGPSH-------HHQQQQQHQFKGMKNPHGEV

Query:  KFCLET
           +ET
Subjt:  KFCLET

AT5G38790.1 unknown protein1.3e-0644.19Show/hide
Query:  EECHSSESGWTMYIGSPANDSSDAASDDEDEEHKGY---------YYAANNQDDSDDSMASDASSGPSHH--HQQQQQHQFKGMKN
        EEC SSESGWT Y+ SP     D    DED  ++GY          +      DSDDSMASDASSGP++   HQ+ +    K  KN
Subjt:  EECHSSESGWTMYIGSPANDSSDAASDDEDEEHKGY---------YYAANNQDDSDDSMASDASSGPSHH--HQQQQQHQFKGMKN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACCTTCCCAAATTTTTGGAGTTTCAGAAGAATGTCACAGCAGTGAATCTGGTTGGACTATGTATATTGGATCTCCTGCTAATGATTCAAGTGATGCAGCTTCTGA
TGATGAAGATGAAGAACATAAAGGCTATTATTATGCAGCAAATAACCAAGATGACAGTGATGATTCCATGGCTTCTGATGCTTCTTCAGGCCCAAGTCATCATCATCAAC
AACAACAACAACATCAATTTAAAGGGATGAAAAATCCCCATGGTGAGGTAAAGTTTTGCTTAGAAACAAAAACCAAGAAGCCATTAATGGAAAAGAAGAAGCAAAGAGCT
GATAGAAAAGATGTCAAAGTGGGACAAAAGCCTAAGAGTTCAGTTCAAAGCAGTTCTAAGGTAAGAAAGAACATCTTGATGGGTAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAACCTTCCCAAATTTTTGGAGTTTCAGAAGAATGTCACAGCAGTGAATCTGGTTGGACTATGTATATTGGATCTCCTGCTAATGATTCAAGTGATGCAGCTTCTGA
TGATGAAGATGAAGAACATAAAGGCTATTATTATGCAGCAAATAACCAAGATGACAGTGATGATTCCATGGCTTCTGATGCTTCTTCAGGCCCAAGTCATCATCATCAAC
AACAACAACAACATCAATTTAAAGGGATGAAAAATCCCCATGGTGAGGTAAAGTTTTGCTTAGAAACAAAAACCAAGAAGCCATTAATGGAAAAGAAGAAGCAAAGAGCT
GATAGAAAAGATGTCAAAGTGGGACAAAAGCCTAAGAGTTCAGTTCAAAGCAGTTCTAAGGTAAGAAAGAACATCTTGATGGGTAAATGA
Protein sequenceShow/hide protein sequence
MEPSQIFGVSEECHSSESGWTMYIGSPANDSSDAASDDEDEEHKGYYYAANNQDDSDDSMASDASSGPSHHHQQQQQHQFKGMKNPHGEVKFCLETKTKKPLMEKKKQRA
DRKDVKVGQKPKSSVQSSSKVRKNILMGK