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Lsi06G013790 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G013790
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionLate secretory pathway protein AVL9-like
Genome locationchr06:24366688..24367528
RNA-Seq ExpressionLsi06G013790
SyntenyLsi06G013790
Gene Ontology termsGO:0009691 - cytokinin biosynthetic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022135291.1 uncharacterized protein LOC111007289 isoform X1 [Momordica charantia]4.2e-2661.74Show/hide
Query:  EECHSSESGWTMYIGSPANDSSDAASD---------DEDEEHKGYYYAANNQDDSDDSMASDASSGPSHHHQQQQQHQFKG-----MKNPHG-----EVK
        EECHSSESGWTMYIGSPA  SSDA +D         DEDE+   Y    NNQD+SDDSMASDASSGPSH    Q  H F G       NPHG     EVK
Subjt:  EECHSSESGWTMYIGSPANDSSDAASD---------DEDEEHKGYYYAANNQDDSDDSMASDASSGPSHHHQQQQQHQFKG-----MKNPHG-----EVK

Query:  FCLETKTKKPLMEKKKQRADRKDVK-----VGQKPKSSVQSSSKKKLNI
        FC ETKTKKPLME  KQRA+RK+VK     VGQKPK+SVQSSSK + +I
Subjt:  FCLETKTKKPLMEKKKQRADRKDVK-----VGQKPKSSVQSSSKKKLNI

XP_022135292.1 uncharacterized protein LOC111007289 isoform X2 [Momordica charantia]4.2e-2661.33Show/hide
Query:  NEECHSSESGWTMYIGSPANDSSDAASD---------DEDEEHKGYYYAANNQDDSDDSMASDASSGPSHHHQQQQQHQFKG-----MKNPHG-----EV
        +EECHSSESGWTMYIGSPA  SSDA +D         DEDE+   Y    NNQD+SDDSMASDASSGPSH    Q  H F G       NPHG     EV
Subjt:  NEECHSSESGWTMYIGSPANDSSDAASD---------DEDEEHKGYYYAANNQDDSDDSMASDASSGPSHHHQQQQQHQFKG-----MKNPHG-----EV

Query:  KFCLETKTKKPLMEKKKQRADRKDVK-----VGQKPKSSVQSSSKKKLNI
        KFC ETKTKKPLME  KQRA+RK+VK     VGQKPK+SVQSSSK + +I
Subjt:  KFCLETKTKKPLMEKKKQRADRKDVK-----VGQKPKSSVQSSSKKKLNI

XP_022987932.1 uncharacterized protein LOC111485335 isoform X3 [Cucurbita maxima]1.2e-2562.59Show/hide
Query:  MNEECHSSESGWTMYIGSP--ANDSSD----AASDDEDEEHKGYYYAANNQDDSDDSMASDASSGPSHHHQQQQQHQFKGMKNP----------HGEVKF
        ++EECHSSESGWTMYIGSP  A+ SSD    AASD+EDEEHKGYY    NQDDSDDSMASDASSGPSH   QQ++H F GMKNP            +   
Subjt:  MNEECHSSESGWTMYIGSP--ANDSSD----AASDDEDEEHKGYYYAANNQDDSDDSMASDASSGPSHHHQQQQQHQFKGMKNP----------HGEVKF

Query:  CLET----KTKKPLMEKKKQRADRKDVKVGQKPKSSVQSSSKKKLNI
        CLET    K KKPL  KKKQRA+RK+VK   +PKSSVQSSSK + +I
Subjt:  CLET----KTKKPLMEKKKQRADRKDVKVGQKPKSSVQSSSKKKLNI

XP_031737107.1 uncharacterized protein LOC105434528 [Cucumis sativus]2.6e-3675.37Show/hide
Query:  MNEECHSSESGWTMYIGSPAN-DSSDAAS--DDEDEEHKGYYYAANNQDDS-DDSMASDASSGPSHHHQQQQQHQFKGMKNPHGEVKFCLET--KTKKPL
        ++EECHSSESGWTMYIGSPAN DSSDAAS  DDEDEEHKGYYYAANN +DS DDSMASDASSGP   HQ+   + FKGMKNP+GE+ FCLET    +KPL
Subjt:  MNEECHSSESGWTMYIGSPAN-DSSDAAS--DDEDEEHKGYYYAANNQDDS-DDSMASDASSGPSHHHQQQQQHQFKGMKNPHGEVKFCLET--KTKKPL

Query:  ME-KKKQRADRKDVKVGQKPKSSVQSSSK-KKLN
        ME KKKQRA+RK+V+VGQKPK+SVQSSSK +K+N
Subjt:  ME-KKKQRADRKDVKVGQKPKSSVQSSSK-KKLN

XP_038879181.1 protein SOB FIVE-LIKE 3-like [Benincasa hispida]8.5e-4379.84Show/hide
Query:  MNEECHSSESGWTMYIGSPANDSSDAAS-DDEDEEHKGYYYAANNQDDS-DDSMASDASSGPSHHHQQQQQHQFKGMKNPHGEVKFCLETKTKKPLMEKK
        ++EECHSSESGWTMYIGSP N SSDAAS DDEDEEHK YYYA NNQDDS DDSMASDASSGP+HH   QQ + FKGMK+P+GE+ FCLETKTKKPLMEKK
Subjt:  MNEECHSSESGWTMYIGSPANDSSDAAS-DDEDEEHKGYYYAANNQDDS-DDSMASDASSGPSHHHQQQQQHQFKGMKNPHGEVKFCLETKTKKPLMEKK

Query:  KQRADRKDVKVGQKPKSSVQSSSKKKLNI
        KQRA++K+VKVGQKPKSSVQSSSK + +I
Subjt:  KQRADRKDVKVGQKPKSSVQSSSKKKLNI

TrEMBL top hitse value%identityAlignment
A0A0A0LUQ4 Uncharacterized protein9.8e-3774.63Show/hide
Query:  MNEECHSSESGWTMYIGSPAN-DSSDAAS--DDEDEEHKGYYYAANNQDDS-DDSMASDASSGPSHHHQQQQQHQFKGMKNPHGEVKFCLET--KTKKPL
        ++EECHSSESGWTMYIGSPAN DSSDAAS  DDEDEEHKGYYYAANN +DS DDSMASDASSGP   HQ+   + FKGMKNP+GE+ FCLET    +KPL
Subjt:  MNEECHSSESGWTMYIGSPAN-DSSDAAS--DDEDEEHKGYYYAANNQDDS-DDSMASDASSGPSHHHQQQQQHQFKGMKNPHGEVKFCLET--KTKKPL

Query:  ME-KKKQRADRKDVKVGQKPKSSVQSSSKKKLNI
        ME KKKQRA+RK+V+VGQKPK+SVQSSSK + +I
Subjt:  ME-KKKQRADRKDVKVGQKPKSSVQSSSKKKLNI

A0A6J1C092 uncharacterized protein LOC111007289 isoform X12.0e-2661.74Show/hide
Query:  EECHSSESGWTMYIGSPANDSSDAASD---------DEDEEHKGYYYAANNQDDSDDSMASDASSGPSHHHQQQQQHQFKG-----MKNPHG-----EVK
        EECHSSESGWTMYIGSPA  SSDA +D         DEDE+   Y    NNQD+SDDSMASDASSGPSH    Q  H F G       NPHG     EVK
Subjt:  EECHSSESGWTMYIGSPANDSSDAASD---------DEDEEHKGYYYAANNQDDSDDSMASDASSGPSHHHQQQQQHQFKG-----MKNPHG-----EVK

Query:  FCLETKTKKPLMEKKKQRADRKDVK-----VGQKPKSSVQSSSKKKLNI
        FC ETKTKKPLME  KQRA+RK+VK     VGQKPK+SVQSSSK + +I
Subjt:  FCLETKTKKPLMEKKKQRADRKDVK-----VGQKPKSSVQSSSKKKLNI

A0A6J1C2A7 uncharacterized protein LOC111007289 isoform X22.0e-2661.33Show/hide
Query:  NEECHSSESGWTMYIGSPANDSSDAASD---------DEDEEHKGYYYAANNQDDSDDSMASDASSGPSHHHQQQQQHQFKG-----MKNPHG-----EV
        +EECHSSESGWTMYIGSPA  SSDA +D         DEDE+   Y    NNQD+SDDSMASDASSGPSH    Q  H F G       NPHG     EV
Subjt:  NEECHSSESGWTMYIGSPANDSSDAASD---------DEDEEHKGYYYAANNQDDSDDSMASDASSGPSHHHQQQQQHQFKG-----MKNPHG-----EV

Query:  KFCLETKTKKPLMEKKKQRADRKDVK-----VGQKPKSSVQSSSKKKLNI
        KFC ETKTKKPLME  KQRA+RK+VK     VGQKPK+SVQSSSK + +I
Subjt:  KFCLETKTKKPLMEKKKQRADRKDVK-----VGQKPKSSVQSSSKKKLNI

A0A6J1JBQ3 uncharacterized protein LOC111485335 isoform X35.9e-2662.59Show/hide
Query:  MNEECHSSESGWTMYIGSP--ANDSSD----AASDDEDEEHKGYYYAANNQDDSDDSMASDASSGPSHHHQQQQQHQFKGMKNP----------HGEVKF
        ++EECHSSESGWTMYIGSP  A+ SSD    AASD+EDEEHKGYY    NQDDSDDSMASDASSGPSH   QQ++H F GMKNP            +   
Subjt:  MNEECHSSESGWTMYIGSP--ANDSSD----AASDDEDEEHKGYYYAANNQDDSDDSMASDASSGPSHHHQQQQQHQFKGMKNP----------HGEVKF

Query:  CLET----KTKKPLMEKKKQRADRKDVKVGQKPKSSVQSSSKKKLNI
        CLET    K KKPL  KKKQRA+RK+VK   +PKSSVQSSSK + +I
Subjt:  CLET----KTKKPLMEKKKQRADRKDVKVGQKPKSSVQSSSKKKLNI

A0A6J1JKS2 uncharacterized protein LOC111485335 isoform X15.9e-2662.59Show/hide
Query:  MNEECHSSESGWTMYIGSP--ANDSSD----AASDDEDEEHKGYYYAANNQDDSDDSMASDASSGPSHHHQQQQQHQFKGMKNP----------HGEVKF
        ++EECHSSESGWTMYIGSP  A+ SSD    AASD+EDEEHKGYY    NQDDSDDSMASDASSGPSH   QQ++H F GMKNP            +   
Subjt:  MNEECHSSESGWTMYIGSP--ANDSSD----AASDDEDEEHKGYYYAANNQDDSDDSMASDASSGPSHHHQQQQQHQFKGMKNP----------HGEVKF

Query:  CLET----KTKKPLMEKKKQRADRKDVKVGQKPKSSVQSSSKKKLNI
        CLET    K KKPL  KKKQRA+RK+VK   +PKSSVQSSSK + +I
Subjt:  CLET----KTKKPLMEKKKQRADRKDVKVGQKPKSSVQSSSKKKLNI

SwissProt top hitse value%identityAlignment
Q9FKQ9 Protein SOB FIVE-LIKE 41.9e-0544.19Show/hide
Query:  EECHSSESGWTMYIGSPANDSSDAASDDEDEEHKGY---------YYAANNQDDSDDSMASDASSGPSHH--HQQQQQHQFKGMKN
        EEC SSESGWT Y+ SP     D    DED  ++GY          +      DSDDSMASDASSGP++   HQ+ +    K  KN
Subjt:  EECHSSESGWTMYIGSPANDSSDAASDDEDEEHKGY---------YYAANNQDDSDDSMASDASSGPSHH--HQQQQQHQFKGMKN

Arabidopsis top hitse value%identityAlignment
AT3G30580.1 unknown protein1.3e-0434.07Show/hide
Query:  EECHSSESGWTMYIGSPANDSSDAASDDE-------DEEHKGYYYAANNQDDSDDSMASDASSGPSHHHQQQQQHQFKG--MKNPHGE----VKFCLETK
        EEC SSESGWT YI S   +  +   D+        +++ + Y        DSDDSMASDASSGPS+H    +  + +G  ++N  GE        ++ K
Subjt:  EECHSSESGWTMYIGSPANDSSDAASDDE-------DEEHKGYYYAANNQDDSDDSMASDASSGPSHHHQQQQQHQFKG--MKNPHGE----VKFCLETK

Query:  TKKPLMEKKKQRADRKDVKVGQKPKSSVQSSSKKK
            L+ +KK           +K KS  +S S KK
Subjt:  TKKPLMEKKKQRADRKDVKVGQKPKSSVQSSSKKK

AT5G08150.1 suppressor of phytochrome b 58.2e-0436.08Show/hide
Query:  NEECHSSESGWTMYIGSPANDSSD---AASDDEDEEHKGYYYAANNQDDSDDSMASDASSGPSH-------HHQQQQQHQFKGMKNPHGEVKFCLET
        +E+C S ESGWTMY+ S ++D  D      DDE+EE            D  DSM SDASSGP           + ++Q+  K  K    E    +ET
Subjt:  NEECHSSESGWTMYIGSPANDSSD---AASDDEDEEHKGYYYAANNQDDSDDSMASDASSGPSH-------HHQQQQQHQFKGMKNPHGEVKFCLET

AT5G38790.1 unknown protein1.4e-0644.19Show/hide
Query:  EECHSSESGWTMYIGSPANDSSDAASDDEDEEHKGY---------YYAANNQDDSDDSMASDASSGPSHH--HQQQQQHQFKGMKN
        EEC SSESGWT Y+ SP     D    DED  ++GY          +      DSDDSMASDASSGP++   HQ+ +    K  KN
Subjt:  EECHSSESGWTMYIGSPANDSSDAASDDEDEEHKGY---------YYAANNQDDSDDSMASDASSGPSHH--HQQQQQHQFKGMKN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGAAGAATGTCACAGCAGTGAATCTGGTTGGACTATGTATATTGGATCTCCTGCTAATGATTCAAGTGATGCAGCTTCTGATGATGAAGATGAAGAACATAAAGG
CTATTATTATGCAGCAAATAACCAAGATGACAGTGATGATTCCATGGCTTCTGATGCTTCTTCAGGCCCAAGTCATCATCATCAACAACAACAACAACATCAATTTAAAG
GGATGAAAAATCCCCATGGTGAGGTAAAGTTTTGCTTAGAAACAAAAACCAAGAAGCCATTAATGGAAAAGAAGAAGCAAAGAGCTGATAGAAAAGATGTCAAAGTGGGA
CAAAAGCCTAAGAGTTCAGTTCAAAGCAGTTCTAAGAAGAAACTAAATATAAGAATCAAGACAAATAAACTATACAATGGTCAGATGAGGTTTATATTGTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATGAAGAATGTCACAGCAGTGAATCTGGTTGGACTATGTATATTGGATCTCCTGCTAATGATTCAAGTGATGCAGCTTCTGATGATGAAGATGAAGAACATAAAGG
CTATTATTATGCAGCAAATAACCAAGATGACAGTGATGATTCCATGGCTTCTGATGCTTCTTCAGGCCCAAGTCATCATCATCAACAACAACAACAACATCAATTTAAAG
GGATGAAAAATCCCCATGGTGAGGTAAAGTTTTGCTTAGAAACAAAAACCAAGAAGCCATTAATGGAAAAGAAGAAGCAAAGAGCTGATAGAAAAGATGTCAAAGTGGGA
CAAAAGCCTAAGAGTTCAGTTCAAAGCAGTTCTAAGAAGAAACTAAATATAAGAATCAAGACAAATAAACTATACAATGGTCAGATGAGGTTTATATTGTACTGA
Protein sequenceShow/hide protein sequence
MNEECHSSESGWTMYIGSPANDSSDAASDDEDEEHKGYYYAANNQDDSDDSMASDASSGPSHHHQQQQQHQFKGMKNPHGEVKFCLETKTKKPLMEKKKQRADRKDVKVG
QKPKSSVQSSSKKKLNIRIKTNKLYNGQMRFILY