; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi06G014200 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G014200
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionHistone deacetylase
Genome locationchr06:24743658..24754309
RNA-Seq ExpressionLsi06G014200
SyntenyLsi06G014200
Gene Ontology termsGO:0006325 - chromatin organization (biological process)
GO:0070932 - histone H3 deacetylation (biological process)
GO:0032041 - NAD-dependent histone deacetylase activity (H3-K14 specific) (molecular function)
InterPro domainsIPR000286 - Histone deacetylase family
IPR012946 - X8 domain
IPR023696 - Ureohydrolase domain superfamily
IPR023801 - Histone deacetylase domain
IPR037138 - Histone deacetylase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589607.1 Histone deacetylase 5, partial [Cucurbita argyrosperma subsp. sororia]2.2e-11775.35Show/hide
Query:  MDVDSSGTRKFNGSNGDSWRVGVLYDERMCKHHTPGGDYHPENPNRIRAIWNKLQTAGILQR---------------------------HYHFCFFISVL
        MDV  SG RKF+G NGDS RVGVLYDERMCKHHTP GDYHPENPNRIRAIWNKLQ++GILQR                           +     F S  
Subjt:  MDVDSSGTRKFNGSNGDSWRVGVLYDERMCKHHTPGGDYHPENPNRIRAIWNKLQTAGILQR---------------------------HYHFCFFISVL

Query:  FCCVFALCCVECCEGSSEAAYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEHDKAMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHGNATQ
              L  +   +GSSEAAYLAAGSVIDVAERVA+GDLDS IAIVRPPGHHAEHD+AMGFCLFNNIAVAASFILNER DLGIKKILIVDWDVHHGNATQ
Subjt:  FCCVFALCCVECCEGSSEAAYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEHDKAMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHGNATQ

Query:  KMFWKDPRVLFFSVHRHEFGSFYPATDDGYYTMVGEGAGAGYNINVPWENARCGDADYLAVWDHILLPVAKEYKPDMIIVSAGFDAGL
        KMFW+DPRVLFFSVHRHEFGSFYPATDDGYYTMVGEG GAGYNINVPWEN +C DADYLAVWDH+LLPVAKEY PDMIIVSAGFDA +
Subjt:  KMFWKDPRVLFFSVHRHEFGSFYPATDDGYYTMVGEGAGAGYNINVPWENARCGDADYLAVWDHILLPVAKEYKPDMIIVSAGFDAGL

XP_022921667.1 histone deacetylase 5 [Cucurbita moschata]2.2e-11775.35Show/hide
Query:  MDVDSSGTRKFNGSNGDSWRVGVLYDERMCKHHTPGGDYHPENPNRIRAIWNKLQTAGILQR---------------------------HYHFCFFISVL
        MDV  SG RKF+G NGDS RVGVLYDERMCKHHTP GDYHPENPNRIRAIWNKLQ++GILQR                           +     F S  
Subjt:  MDVDSSGTRKFNGSNGDSWRVGVLYDERMCKHHTPGGDYHPENPNRIRAIWNKLQTAGILQR---------------------------HYHFCFFISVL

Query:  FCCVFALCCVECCEGSSEAAYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEHDKAMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHGNATQ
              L  +   +GSSEAAYLAAGSVIDVAERVA+GDLDS IAIVRPPGHHAEHD+AMGFCLFNNIAVAASFILNER DLGIKKILIVDWDVHHGNATQ
Subjt:  FCCVFALCCVECCEGSSEAAYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEHDKAMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHGNATQ

Query:  KMFWKDPRVLFFSVHRHEFGSFYPATDDGYYTMVGEGAGAGYNINVPWENARCGDADYLAVWDHILLPVAKEYKPDMIIVSAGFDAGL
        KMFW+DPRVLFFSVHRHEFGSFYPATDDGYYTMVGEG GAGYNINVPWEN +C DADYLAVWDH+LLPVAKEY PDMIIVSAGFDA +
Subjt:  KMFWKDPRVLFFSVHRHEFGSFYPATDDGYYTMVGEGAGAGYNINVPWENARCGDADYLAVWDHILLPVAKEYKPDMIIVSAGFDAGL

XP_022987953.1 histone deacetylase 5 [Cucurbita maxima]1.8e-11976.74Show/hide
Query:  MDVDSSGTRKFNGSNGDSWRVGVLYDERMCKHHTPGGDYHPENPNRIRAIWNKLQTAGILQR---------------------HYHFCFFISVLFC----
        MDV  SGTRKF+G NGDS RVGVLYDERMCKHHTP GDYHPENPNRIRAIWNKLQ++GILQR                     H      IS        
Subjt:  MDVDSSGTRKFNGSNGDSWRVGVLYDERMCKHHTPGGDYHPENPNRIRAIWNKLQTAGILQR---------------------HYHFCFFISVLFC----

Query:  --CVFALCCVECCEGSSEAAYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEHDKAMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHGNATQ
              L  +   +GSSEAAYLAAGSVIDVAERVA+GDLDS IAIVRPPGHHAEHD+AMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHGNATQ
Subjt:  --CVFALCCVECCEGSSEAAYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEHDKAMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHGNATQ

Query:  KMFWKDPRVLFFSVHRHEFGSFYPATDDGYYTMVGEGAGAGYNINVPWENARCGDADYLAVWDHILLPVAKEYKPDMIIVSAGFDAGL
        KMFW+DPRVLFFSVHRHEFGSFYPATDDGYYTMVGEG GAGYNINVPWEN +C DADYLAVWDHILLPVAKEY PDMIIVSAGFDA +
Subjt:  KMFWKDPRVLFFSVHRHEFGSFYPATDDGYYTMVGEGAGAGYNINVPWENARCGDADYLAVWDHILLPVAKEYKPDMIIVSAGFDAGL

XP_023516037.1 histone deacetylase 5 [Cucurbita pepo subsp. pepo]1.2e-11876.04Show/hide
Query:  MDVDSSGTRKFNGSNGDSWRVGVLYDERMCKHHTPGGDYHPENPNRIRAIWNKLQTAGILQR---------------------------HYHFCFFISVL
        MDV  SG RKF+G NGDS RVGVLYDERMCKHHTP GDYHPENPNRIRAIWNKLQ++GILQR                           +     F S  
Subjt:  MDVDSSGTRKFNGSNGDSWRVGVLYDERMCKHHTPGGDYHPENPNRIRAIWNKLQTAGILQR---------------------------HYHFCFFISVL

Query:  FCCVFALCCVECCEGSSEAAYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEHDKAMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHGNATQ
              L  +   +GSSEAAYLAAGSVIDVAERVA+GDLDS IAIVRPPGHHAEHD+AMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHGNATQ
Subjt:  FCCVFALCCVECCEGSSEAAYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEHDKAMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHGNATQ

Query:  KMFWKDPRVLFFSVHRHEFGSFYPATDDGYYTMVGEGAGAGYNINVPWENARCGDADYLAVWDHILLPVAKEYKPDMIIVSAGFDAGL
        KMFW+DPRVLFFSVHRHEFGSFYPATDDGYYTMVGEG GAGYNINVPWEN +C DADYLAVWDHILLPVAKEY PDMIIVSAGFDA +
Subjt:  KMFWKDPRVLFFSVHRHEFGSFYPATDDGYYTMVGEGAGAGYNINVPWENARCGDADYLAVWDHILLPVAKEYKPDMIIVSAGFDAGL

XP_038878340.1 histone deacetylase 5 [Benincasa hispida]1.1e-12178.47Show/hide
Query:  MDVDSSGTRKFNGSNGDSWRVGVLYDERMCKHHTPGGDYHPENPNRIRAIWNKLQTAGILQR---------------------HYHFC------FFISVL
        M+VD SGTRKFNGSNGDS RVGVLYD+RMCKHHTP GDYHPENPNRIRAIWNKL +AGILQR                     H +         F S  
Subjt:  MDVDSSGTRKFNGSNGDSWRVGVLYDERMCKHHTPGGDYHPENPNRIRAIWNKLQTAGILQR---------------------HYHFC------FFISVL

Query:  FCCVFALCCVECCEGSSEAAYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEHDKAMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHGNATQ
              L  +   E SSEAAYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEHD+AMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHGNATQ
Subjt:  FCCVFALCCVECCEGSSEAAYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEHDKAMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHGNATQ

Query:  KMFWKDPRVLFFSVHRHEFGSFYPATDDGYYTMVGEGAGAGYNINVPWENARCGDADYLAVWDHILLPVAKEYKPDMIIVSAGFDAGL
        KMFW+DPRVLFFSVHRHEFGSFYPATDDGYYTMVGEG GAGYNINVPWENARCGD DYLAVWDHILLPVAKEY PDMIIVSAGFDA +
Subjt:  KMFWKDPRVLFFSVHRHEFGSFYPATDDGYYTMVGEGAGAGYNINVPWENARCGDADYLAVWDHILLPVAKEYKPDMIIVSAGFDAGL

TrEMBL top hitse value%identityAlignment
A0A0A0LPI7 Histone deacetylase1.2e-11674.65Show/hide
Query:  MDVDSSGTRKFNGSNGDSWRVGVLYDERMCKHHTPGGDYHPENPNRIRAIWNKLQTAGILQR---------------------HYHFC------FFISVL
        MDVD SGT KFNG NGDS R+GVLYD+RMCKHHTP GDYHPENP RIRAIWNKL +AGILQR                     H           F S  
Subjt:  MDVDSSGTRKFNGSNGDSWRVGVLYDERMCKHHTPGGDYHPENPNRIRAIWNKLQTAGILQR---------------------HYHFC------FFISVL

Query:  FCCVFALCCVECCEGSSEAAYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEHDKAMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHGNATQ
              L  +   EGSSEA+YLAAGSVIDVAE+VAKGDLDS IAIVRPPGHHAEHD+AMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHGNATQ
Subjt:  FCCVFALCCVECCEGSSEAAYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEHDKAMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHGNATQ

Query:  KMFWKDPRVLFFSVHRHEFGSFYPATDDGYYTMVGEGAGAGYNINVPWENARCGDADYLAVWDHILLPVAKEYKPDMIIVSAGFDAGL
        KMFW+DPRVLFFSVHRHE+GSFYPAT DG+YT VGEG GAGYNINVPWEN RCGDADYLAVWDHILLPVA+EY PDMI+VSAGFDA +
Subjt:  KMFWKDPRVLFFSVHRHEFGSFYPATDDGYYTMVGEGAGAGYNINVPWENARCGDADYLAVWDHILLPVAKEYKPDMIIVSAGFDAGL

A0A1S3BWL5 Histone deacetylase2.0e-11675Show/hide
Query:  MDVDSSGTRKFNGSNGDSWRVGVLYDERMCKHHTPGGDYHPENPNRIRAIWNKLQTAGILQR---------------------HYHFC------FFISVL
        MDVD S T KFNG NGDS R+GVLYDERMCKHHTP GDYHPENP RIRAIWNKL  AGILQR                     H           F S  
Subjt:  MDVDSSGTRKFNGSNGDSWRVGVLYDERMCKHHTPGGDYHPENPNRIRAIWNKLQTAGILQR---------------------HYHFC------FFISVL

Query:  FCCVFALCCVECCEGSSEAAYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEHDKAMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHGNATQ
              L  +   EGSSEAAYLAAGSVIDVAE+VA+GDLDS IAIVRPPGHHAEHD+AMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHGNATQ
Subjt:  FCCVFALCCVECCEGSSEAAYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEHDKAMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHGNATQ

Query:  KMFWKDPRVLFFSVHRHEFGSFYPATDDGYYTMVGEGAGAGYNINVPWENARCGDADYLAVWDHILLPVAKEYKPDMIIVSAGFDAGL
        KMFW+DPRVLFFSVHRHEFGSFYPAT DG+YT VGEG GAGYNINVPWEN RCGDADYLAVWDHILLPVA+EY PDMI+VSAGFDA +
Subjt:  KMFWKDPRVLFFSVHRHEFGSFYPATDDGYYTMVGEGAGAGYNINVPWENARCGDADYLAVWDHILLPVAKEYKPDMIIVSAGFDAGL

A0A5A7UWV4 Histone deacetylase2.0e-11675Show/hide
Query:  MDVDSSGTRKFNGSNGDSWRVGVLYDERMCKHHTPGGDYHPENPNRIRAIWNKLQTAGILQR---------------------HYHFC------FFISVL
        MDVD S T KFNG NGDS R+GVLYDERMCKHHTP GDYHPENP RIRAIWNKL  AGILQR                     H           F S  
Subjt:  MDVDSSGTRKFNGSNGDSWRVGVLYDERMCKHHTPGGDYHPENPNRIRAIWNKLQTAGILQR---------------------HYHFC------FFISVL

Query:  FCCVFALCCVECCEGSSEAAYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEHDKAMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHGNATQ
              L  +   EGSSEAAYLAAGSVIDVAE+VA+GDLDS IAIVRPPGHHAEHD+AMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHGNATQ
Subjt:  FCCVFALCCVECCEGSSEAAYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEHDKAMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHGNATQ

Query:  KMFWKDPRVLFFSVHRHEFGSFYPATDDGYYTMVGEGAGAGYNINVPWENARCGDADYLAVWDHILLPVAKEYKPDMIIVSAGFDAGL
        KMFW+DPRVLFFSVHRHEFGSFYPAT DG+YT VGEG GAGYNINVPWEN RCGDADYLAVWDHILLPVA+EY PDMI+VSAGFDA +
Subjt:  KMFWKDPRVLFFSVHRHEFGSFYPATDDGYYTMVGEGAGAGYNINVPWENARCGDADYLAVWDHILLPVAKEYKPDMIIVSAGFDAGL

A0A6J1E149 Histone deacetylase1.1e-11775.35Show/hide
Query:  MDVDSSGTRKFNGSNGDSWRVGVLYDERMCKHHTPGGDYHPENPNRIRAIWNKLQTAGILQR---------------------------HYHFCFFISVL
        MDV  SG RKF+G NGDS RVGVLYDERMCKHHTP GDYHPENPNRIRAIWNKLQ++GILQR                           +     F S  
Subjt:  MDVDSSGTRKFNGSNGDSWRVGVLYDERMCKHHTPGGDYHPENPNRIRAIWNKLQTAGILQR---------------------------HYHFCFFISVL

Query:  FCCVFALCCVECCEGSSEAAYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEHDKAMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHGNATQ
              L  +   +GSSEAAYLAAGSVIDVAERVA+GDLDS IAIVRPPGHHAEHD+AMGFCLFNNIAVAASFILNER DLGIKKILIVDWDVHHGNATQ
Subjt:  FCCVFALCCVECCEGSSEAAYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEHDKAMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHGNATQ

Query:  KMFWKDPRVLFFSVHRHEFGSFYPATDDGYYTMVGEGAGAGYNINVPWENARCGDADYLAVWDHILLPVAKEYKPDMIIVSAGFDAGL
        KMFW+DPRVLFFSVHRHEFGSFYPATDDGYYTMVGEG GAGYNINVPWEN +C DADYLAVWDH+LLPVAKEY PDMIIVSAGFDA +
Subjt:  KMFWKDPRVLFFSVHRHEFGSFYPATDDGYYTMVGEGAGAGYNINVPWENARCGDADYLAVWDHILLPVAKEYKPDMIIVSAGFDAGL

A0A6J1JKV3 Histone deacetylase8.6e-12076.74Show/hide
Query:  MDVDSSGTRKFNGSNGDSWRVGVLYDERMCKHHTPGGDYHPENPNRIRAIWNKLQTAGILQR---------------------HYHFCFFISVLFC----
        MDV  SGTRKF+G NGDS RVGVLYDERMCKHHTP GDYHPENPNRIRAIWNKLQ++GILQR                     H      IS        
Subjt:  MDVDSSGTRKFNGSNGDSWRVGVLYDERMCKHHTPGGDYHPENPNRIRAIWNKLQTAGILQR---------------------HYHFCFFISVLFC----

Query:  --CVFALCCVECCEGSSEAAYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEHDKAMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHGNATQ
              L  +   +GSSEAAYLAAGSVIDVAERVA+GDLDS IAIVRPPGHHAEHD+AMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHGNATQ
Subjt:  --CVFALCCVECCEGSSEAAYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEHDKAMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHGNATQ

Query:  KMFWKDPRVLFFSVHRHEFGSFYPATDDGYYTMVGEGAGAGYNINVPWENARCGDADYLAVWDHILLPVAKEYKPDMIIVSAGFDAGL
        KMFW+DPRVLFFSVHRHEFGSFYPATDDGYYTMVGEG GAGYNINVPWEN +C DADYLAVWDHILLPVAKEY PDMIIVSAGFDA +
Subjt:  KMFWKDPRVLFFSVHRHEFGSFYPATDDGYYTMVGEGAGAGYNINVPWENARCGDADYLAVWDHILLPVAKEYKPDMIIVSAGFDAGL

SwissProt top hitse value%identityAlignment
Q8LRK8 Histone deacetylase 181.2e-8958.9Show/hide
Query:  MDVDSSGTRKFNGSN---GDSWR-VGVLYDERMCKHHTPGGDYHPENPNRIRAIWNKLQTAGILQR---------------------HYHFCFFISV---
        M  +SSG +   G     G S R VG++YDE MCKH TP G    E P+RIR IW KLQ AG+ QR                     H +    IS    
Subjt:  MDVDSSGTRKFNGSN---GDSWR-VGVLYDERMCKHHTPGGDYHPENPNRIRAIWNKLQTAGILQR---------------------HYHFCFFISV---

Query:  ---LFCCVFALCCVECCEGSSEAAYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEHDKAMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHG
                  L  +    GSSEAAYLAAGSV+ VAE+VA+G+LD   AIVRPPGHHAE D+AMGFCLFNN+AVAASF+LNERPDL +KKILIVDWD+HHG
Subjt:  ---LFCCVFALCCVECCEGSSEAAYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEHDKAMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHG

Query:  NATQKMFWKDPRVLFFSVHRHEFGSFYPATDDGYYTMVGEGAGAGYNINVPWENARCGDADYLAVWDHILLPVAKEYKPDMIIVSAGFDAGL
        N TQKMFWKD RVL FSVHRH+ GSFYP  DDG + MVGEG G G+NINVPWE   CGDADYLAVW+HIL+PV KE+KPD+I++SAGFDA +
Subjt:  NATQKMFWKDPRVLFFSVHRHEFGSFYPATDDGYYTMVGEGAGAGYNINVPWENARCGDADYLAVWDHILLPVAKEYKPDMIIVSAGFDAGL

Q8RX28 Histone deacetylase 57.1e-9563.2Show/hide
Query:  RVGVLYDERMCKHHTPGGDYHPENPNRIRAIWNKLQTAGILQR---------------------HYHFCFFISV------LFCCVFALCCVECCEGSSEA
        +VG++YDE MCKH TP G+ HPE P+RIR IW KLQ AG+ QR                     H +    IS              L  +    GSSEA
Subjt:  RVGVLYDERMCKHHTPGGDYHPENPNRIRAIWNKLQTAGILQR---------------------HYHFCFFISV------LFCCVFALCCVECCEGSSEA

Query:  AYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEHDKAMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHGNATQKMFWKDPRVLFFSVHRHEF
        AYLAAGSV+ +AE+VA+G+LD   AIVRPPGHHAE D+AMGFCLFNN+AVAASF+LNERPDLG+KKILIVDWDVHHGN TQKMFWKDPRVLFFSVHRHE+
Subjt:  AYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEHDKAMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHGNATQKMFWKDPRVLFFSVHRHEF

Query:  GSFYPATDDGYYTMVGEGAGAGYNINVPWENARCGDADYLAVWDHILLPVAKEYKPDMIIVSAGFDAGL
        G FYPA DDG Y MVGEG G G+NINVPW+  RCGDADYLA WDHIL+PVA+E+ PD+I +SAGFDA +
Subjt:  GSFYPATDDGYYTMVGEGAGAGYNINVPWENARCGDADYLAVWDHILLPVAKEYKPDMIIVSAGFDAGL

Q9UBN7 Histone deacetylase 62.6e-4938.89Show/hide
Query:  RVGVLYDERMCKHHTPGGDYHPENPNRIRAIWNKLQTAGILQRHYHFCFFI-------SVLFCCVFA-----------------------LCCVECCEGS
        R G++YD+ M  H      +HPE P RI  I  +L+  G+  R    C  +       + L  C  A                          +  C  +
Subjt:  RVGVLYDERMCKHHTPGGDYHPENPNRIRAIWNKLQTAGILQRHYHFCFFI-------SVLFCCVFA-----------------------LCCVECCEGS

Query:  SEAAYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEHDKAMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHGNATQKMFWKDPRVLFFSVHR
           A LA G+   + E V  G++ +  A+VRPPGHHAE D A GFC FN++AVAA     +       +ILIVDWDVHHGN TQ MF  DP VL+ S+HR
Subjt:  SEAAYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEHDKAMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHGNATQKMFWKDPRVLFFSVHR

Query:  HEFGSFYPATDDGYYTMVGEGAGAGYNINVPWENARCGDADYLAVWDHILLPVAKEYKPDMIIVSAGFDA
        ++ G+F+P  D+G  + +G  AG G+ +NV W   R GDADYLA W  ++LP+A E+ P++++VSAGFDA
Subjt:  HEFGSFYPATDDGYYTMVGEGAGAGYNINVPWENARCGDADYLAVWDHILLPVAKEYKPDMIIVSAGFDA

Q9UKV0 Histone deacetylase 98.5e-4839.37Show/hide
Query:  GVLYDERMCKHHTPGGD--YHPENPNRIRAIWNKLQTAGILQR--------------------HYHFCF----------------------FISVLFCCV
        G+ YD  M KH    G+   HPE+  RI++IW++LQ  G+L +                    H+   +                      F S L C  
Subjt:  GVLYDERMCKHHTPGGD--YHPENPNRIRAIWNKLQTAGILQR--------------------HYHFCF----------------------FISVLFCCV

Query:  FALCCVECCE--GSSEAAYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEHDKAMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHGNATQKM
          +          SS AA +A G VI++A +VA G+L +  A+VRPPGHHAE   AMGFC FN++A+ A ++   R  L I KILIVD DVHHGN TQ+ 
Subjt:  FALCCVECCE--GSSEAAYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEHDKAMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHGNATQKM

Query:  FWKDPRVLFFSVHRHEFGSFYPATDDGYYTMVGEGAGAGYNINVPWE---NARCGDADYLAVWDHILLPVAKEYKPDMIIVSAGFDA
        F+ DP +L+ S+HR++ G+F+P +  G    VG G G GYNIN+ W    +   GD +YL  +  I+ PVAKE+ PDM++VSAGFDA
Subjt:  FWKDPRVLFFSVHRHEFGSFYPATDDGYYTMVGEGAGAGYNINVPWE---NARCGDADYLAVWDHILLPVAKEYKPDMIIVSAGFDA

Q9Z2V5 Histone deacetylase 61.1e-5039.64Show/hide
Query:  DSW-----RVGVLYDERMCKHHTPGGDYHPENPNRIRAIWNKLQTAGILQRHYHFCFFI-------SVLFCCVFA-----------------------LC
        D+W     R G++YDE+M  H     ++HPE P RI  I   L+  G+  R    C  +       S L  C  A                         
Subjt:  DSW-----RVGVLYDERMCKHHTPGGDYHPENPNRIRAIWNKLQTAGILQRHYHFCFFI-------SVLFCCVFA-----------------------LC

Query:  CVECCEGSSEAAYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEHDKAMGFCLFNNIAVAA--SFILNERPDLGIKKILIVDWDVHHGNATQKMFWKD
         +  C  +   A LA G+   + E V  G++ + IA+VRPPGHHAE + A GFC FN++AVAA  + I+  R      +ILIVDWDVHHGN TQ +F  D
Subjt:  CVECCEGSSEAAYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEHDKAMGFCLFNNIAVAA--SFILNERPDLGIKKILIVDWDVHHGNATQKMFWKD

Query:  PRVLFFSVHRHEFGSFYPATDDGYYTMVGEGAGAGYNINVPWENARCGDADYLAVWDHILLPVAKEYKPDMIIVSAGFDA
        P VL+ S+HR++ G+F+P  D+G  + VG  AG G+ +NVPW   R GDADYLA W  ++LP+A E+ P+++++SAGFDA
Subjt:  PRVLFFSVHRHEFGSFYPATDDGYYTMVGEGAGAGYNINVPWENARCGDADYLAVWDHILLPVAKEYKPDMIIVSAGFDA

Arabidopsis top hitse value%identityAlignment
AT3G18520.1 histone deacetylase 156.6e-4841.24Show/hide
Query:  KFNGSNGDSWRVGVLYDERMCKH--HTPGGDYHPENPNRIRAIWNKLQTAGIL----------------------QRHYHFCFFISVLFCCVFALCCVEC
        K+ GS+  +    V +DERM  H         HPE P+R+RAI   L TAG+                         H       S L    F       
Subjt:  KFNGSNGDSWRVGVLYDERMCKH--HTPGGDYHPENPNRIRAIWNKLQTAGIL----------------------QRHYHFCFFISVLFCCVFALCCVEC

Query:  CEGSSEAAYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEHDKAMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHGNATQKMFWKDPRVLFF
         E S+ AA LAAG   D+A  +  G + +  A+VRPPGHHA    AMGFCL NN AVAA          G KK+LIVDWDVHHGN TQ++F ++  VL+ 
Subjt:  CEGSSEAAYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEHDKAMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHGNATQKMFWKDPRVLFF

Query:  SVHRHEFGSFYPATDDGYYTMVGEGAGAGYNINVPWENARCGDADYLAVWDHILLPVAKEYKPDMIIVSAGFDA
        S+HRHE G+FYP T  G    VG   G GY +NVPW     GD DY+  + H++LP+A  + PD +I+SAGFDA
Subjt:  SVHRHEFGSFYPATDDGYYTMVGEGAGAGYNINVPWENARCGDADYLAVWDHILLPVAKEYKPDMIIVSAGFDA

AT3G18520.2 histone deacetylase 156.6e-4841.24Show/hide
Query:  KFNGSNGDSWRVGVLYDERMCKH--HTPGGDYHPENPNRIRAIWNKLQTAGIL----------------------QRHYHFCFFISVLFCCVFALCCVEC
        K+ GS+  +    V +DERM  H         HPE P+R+RAI   L TAG+                         H       S L    F       
Subjt:  KFNGSNGDSWRVGVLYDERMCKH--HTPGGDYHPENPNRIRAIWNKLQTAGIL----------------------QRHYHFCFFISVLFCCVFALCCVEC

Query:  CEGSSEAAYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEHDKAMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHGNATQKMFWKDPRVLFF
         E S+ AA LAAG   D+A  +  G + +  A+VRPPGHHA    AMGFCL NN AVAA          G KK+LIVDWDVHHGN TQ++F ++  VL+ 
Subjt:  CEGSSEAAYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEHDKAMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHGNATQKMFWKDPRVLFF

Query:  SVHRHEFGSFYPATDDGYYTMVGEGAGAGYNINVPWENARCGDADYLAVWDHILLPVAKEYKPDMIIVSAGFDA
        S+HRHE G+FYP T  G    VG   G GY +NVPW     GD DY+  + H++LP+A  + PD +I+SAGFDA
Subjt:  SVHRHEFGSFYPATDDGYYTMVGEGAGAGYNINVPWENARCGDADYLAVWDHILLPVAKEYKPDMIIVSAGFDA

AT5G61060.1 histone deacetylase 55.0e-9663.2Show/hide
Query:  RVGVLYDERMCKHHTPGGDYHPENPNRIRAIWNKLQTAGILQR---------------------HYHFCFFISV------LFCCVFALCCVECCEGSSEA
        +VG++YDE MCKH TP G+ HPE P+RIR IW KLQ AG+ QR                     H +    IS              L  +    GSSEA
Subjt:  RVGVLYDERMCKHHTPGGDYHPENPNRIRAIWNKLQTAGILQR---------------------HYHFCFFISV------LFCCVFALCCVECCEGSSEA

Query:  AYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEHDKAMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHGNATQKMFWKDPRVLFFSVHRHEF
        AYLAAGSV+ +AE+VA+G+LD   AIVRPPGHHAE D+AMGFCLFNN+AVAASF+LNERPDLG+KKILIVDWDVHHGN TQKMFWKDPRVLFFSVHRHE+
Subjt:  AYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEHDKAMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHGNATQKMFWKDPRVLFFSVHRHEF

Query:  GSFYPATDDGYYTMVGEGAGAGYNINVPWENARCGDADYLAVWDHILLPVAKEYKPDMIIVSAGFDAGL
        G FYPA DDG Y MVGEG G G+NINVPW+  RCGDADYLA WDHIL+PVA+E+ PD+I +SAGFDA +
Subjt:  GSFYPATDDGYYTMVGEGAGAGYNINVPWENARCGDADYLAVWDHILLPVAKEYKPDMIIVSAGFDAGL

AT5G61060.2 histone deacetylase 55.0e-9663.2Show/hide
Query:  RVGVLYDERMCKHHTPGGDYHPENPNRIRAIWNKLQTAGILQR---------------------HYHFCFFISV------LFCCVFALCCVECCEGSSEA
        +VG++YDE MCKH TP G+ HPE P+RIR IW KLQ AG+ QR                     H +    IS              L  +    GSSEA
Subjt:  RVGVLYDERMCKHHTPGGDYHPENPNRIRAIWNKLQTAGILQR---------------------HYHFCFFISV------LFCCVFALCCVECCEGSSEA

Query:  AYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEHDKAMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHGNATQKMFWKDPRVLFFSVHRHEF
        AYLAAGSV+ +AE+VA+G+LD   AIVRPPGHHAE D+AMGFCLFNN+AVAASF+LNERPDLG+KKILIVDWDVHHGN TQKMFWKDPRVLFFSVHRHE+
Subjt:  AYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEHDKAMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHGNATQKMFWKDPRVLFFSVHRHEF

Query:  GSFYPATDDGYYTMVGEGAGAGYNINVPWENARCGDADYLAVWDHILLPVAKEYKPDMIIVSAGFDAGL
        G FYPA DDG Y MVGEG G G+NINVPW+  RCGDADYLA WDHIL+PVA+E+ PD+I +SAGFDA +
Subjt:  GSFYPATDDGYYTMVGEGAGAGYNINVPWENARCGDADYLAVWDHILLPVAKEYKPDMIIVSAGFDAGL

AT5G61070.1 histone deacetylase of the RPD3/HDA1 superfamily 188.3e-9158.9Show/hide
Query:  MDVDSSGTRKFNGSN---GDSWR-VGVLYDERMCKHHTPGGDYHPENPNRIRAIWNKLQTAGILQR---------------------HYHFCFFISV---
        M  +SSG +   G     G S R VG++YDE MCKH TP G    E P+RIR IW KLQ AG+ QR                     H +    IS    
Subjt:  MDVDSSGTRKFNGSN---GDSWR-VGVLYDERMCKHHTPGGDYHPENPNRIRAIWNKLQTAGILQR---------------------HYHFCFFISV---

Query:  ---LFCCVFALCCVECCEGSSEAAYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEHDKAMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHG
                  L  +    GSSEAAYLAAGSV+ VAE+VA+G+LD   AIVRPPGHHAE D+AMGFCLFNN+AVAASF+LNERPDL +KKILIVDWD+HHG
Subjt:  ---LFCCVFALCCVECCEGSSEAAYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEHDKAMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHG

Query:  NATQKMFWKDPRVLFFSVHRHEFGSFYPATDDGYYTMVGEGAGAGYNINVPWENARCGDADYLAVWDHILLPVAKEYKPDMIIVSAGFDAGL
        N TQKMFWKD RVL FSVHRH+ GSFYP  DDG + MVGEG G G+NINVPWE   CGDADYLAVW+HIL+PV KE+KPD+I++SAGFDA +
Subjt:  NATQKMFWKDPRVLFFSVHRHEFGSFYPATDDGYYTMVGEGAGAGYNINVPWENARCGDADYLAVWDHILLPVAKEYKPDMIIVSAGFDAGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTGGGTTATGCCTGTTTTAGCTATTGGGCTCCTTATTCTGGCCATGACTGGCCATTCAATCTTTGGTTTCTTCTGGCTCTCTCTTGAAATGCTGGTTTCTGAACT
TTTAGGTGCAACATGGTGCGTTTGCAAGGATGGATTGGGTGATGCTGCTCTCCAGAAGACACTGGACTATGCTTGTGGAGCTGGGGCTGACTGTATCTCTATTCATCAAA
ATGGGGGCTGTTTCCTTCCCAACACCGTCAAGGCTCATTGTTCCTATGCTACTAATAGCTACTTTCAAAAGAAGGGTCAAGCTCTTGGTTCCTGTGATTTTTCTGGCACA
GCAATGGTCACCACTACTGACCCCAGCATTTCAGGTTGCGTTTATCCTTCTAGCGCCAGCCCTGTAAGCAGTGGCACTATTCCAGTAACTGGGACTCCAACCACCACCAA
CCCAGGCACTGGATTAACTCCCACAACCAACACCCCATTTGGTTCTACAACACCCACCGGTGTCCTCGGCGGGAATGGGTTCGGTAACGGCAACAACGGTCTAGGACCAT
CAGGGGTCGGCGGGATGAACACCGACTACAGTGACAACGGATCGAGACTCCAACTCACTCTAATTGCCAATGGTCAGATTGGATTCCAATATGCAAGATGGCTAGCATGT
GATGTTCCTGTTCTTGATTATCGGAAAGTTTTCGTCAGCTCAGGGACTTCGCTGGTTAGATTTTTTTTCGAAGAAATGGACGTTGATAGCTCCGGAACTAGGAAATTCAA
CGGAAGCAATGGCGATTCATGGAGGGTAGGAGTTTTGTACGACGAGAGGATGTGCAAGCATCACACACCCGGCGGAGATTACCATCCTGAGAATCCCAATCGAATTAGGG
CCATTTGGAACAAGCTACAGACCGCTGGCATTCTTCAGAGGCATTATCATTTTTGCTTTTTCATTAGCGTTTTATTCTGTTGTGTATTTGCTTTATGCTGTGTGGAGTGT
TGCGAAGGGTCATCCGAAGCTGCTTATCTGGCTGCTGGCTCTGTCATAGATGTTGCTGAAAGAGTAGCTAAAGGAGATTTAGATTCCGCCATTGCCATTGTGAGGCCGCC
GGGTCATCATGCAGAACATGATAAAGCTATGGGGTTTTGTTTGTTCAACAACATAGCGGTGGCAGCAAGCTTTATTTTGAATGAAAGACCAGATTTGGGTATTAAGAAAA
TTTTAATTGTTGATTGGGATGTTCATCATGGCAATGCAACACAAAAGATGTTCTGGAAGGATCCCCGTGTTTTGTTCTTCTCTGTTCACCGGCACGAATTTGGAAGTTTT
TATCCAGCCACAGATGATGGTTATTATACCATGGTTGGAGAAGGAGCTGGAGCAGGATATAATATAAATGTCCCTTGGGAGAATGCACGATGTGGGGATGCTGACTATCT
AGCAGTTTGGGACCATATCTTGCTTCCTGTTGCCAAGGAATATAAACCTGATATGATCATAGTGTCTGCTGGATTTGATGCAGGTCTGATGCTACTAACTTGA
mRNA sequenceShow/hide mRNA sequence
ATTTGGTTGAACCTTGTTTACAAATGGGCTAACATGTTCTGAGTTTCTGTGAGTTGAGAAATTGAAGTTATTGATTGGTGTGTCACGCGCCTACTAGTAAACAAGGAGCA
GAAAGAGCAGTGGCTAGAAAACACAAAAGTGGGGCCATTCTCATTGATGCCATCGTTTACATTACCTTCTGAAAAGCCACTGCCTTTATTTTGTATAGAACATACCCCTC
CACTTCAGGGTTTTTTACATTTTCACTCTAACACACACACTTTCTCTCCTTCCCTTTTTCTCTCTACCCTTCTCTCTTTCTGTGTGTGGTAGTGAGAGTTTTTCTTCTGG
CCACTATCTGATCTGAGCTTTGTAATCATGTCTTGGGTTATGCCTGTTTTAGCTATTGGGCTCCTTATTCTGGCCATGACTGGCCATTCAATCTTTGGTTTCTTCTGGCT
CTCTCTTGAAATGCTGGTTTCTGAACTTTTAGGTGCAACATGGTGCGTTTGCAAGGATGGATTGGGTGATGCTGCTCTCCAGAAGACACTGGACTATGCTTGTGGAGCTG
GGGCTGACTGTATCTCTATTCATCAAAATGGGGGCTGTTTCCTTCCCAACACCGTCAAGGCTCATTGTTCCTATGCTACTAATAGCTACTTTCAAAAGAAGGGTCAAGCT
CTTGGTTCCTGTGATTTTTCTGGCACAGCAATGGTCACCACTACTGACCCCAGCATTTCAGGTTGCGTTTATCCTTCTAGCGCCAGCCCTGTAAGCAGTGGCACTATTCC
AGTAACTGGGACTCCAACCACCACCAACCCAGGCACTGGATTAACTCCCACAACCAACACCCCATTTGGTTCTACAACACCCACCGGTGTCCTCGGCGGGAATGGGTTCG
GTAACGGCAACAACGGTCTAGGACCATCAGGGGTCGGCGGGATGAACACCGACTACAGTGACAACGGATCGAGACTCCAACTCACTCTAATTGCCAATGGTCAGATTGGA
TTCCAATATGCAAGATGGCTAGCATGTGATGTTCCTGTTCTTGATTATCGGAAAGTTTTCGTCAGCTCAGGGACTTCGCTGGTTAGATTTTTTTTCGAAGAAATGGACGT
TGATAGCTCCGGAACTAGGAAATTCAACGGAAGCAATGGCGATTCATGGAGGGTAGGAGTTTTGTACGACGAGAGGATGTGCAAGCATCACACACCCGGCGGAGATTACC
ATCCTGAGAATCCCAATCGAATTAGGGCCATTTGGAACAAGCTACAGACCGCTGGCATTCTTCAGAGGCATTATCATTTTTGCTTTTTCATTAGCGTTTTATTCTGTTGT
GTATTTGCTTTATGCTGTGTGGAGTGTTGCGAAGGGTCATCCGAAGCTGCTTATCTGGCTGCTGGCTCTGTCATAGATGTTGCTGAAAGAGTAGCTAAAGGAGATTTAGA
TTCCGCCATTGCCATTGTGAGGCCGCCGGGTCATCATGCAGAACATGATAAAGCTATGGGGTTTTGTTTGTTCAACAACATAGCGGTGGCAGCAAGCTTTATTTTGAATG
AAAGACCAGATTTGGGTATTAAGAAAATTTTAATTGTTGATTGGGATGTTCATCATGGCAATGCAACACAAAAGATGTTCTGGAAGGATCCCCGTGTTTTGTTCTTCTCT
GTTCACCGGCACGAATTTGGAAGTTTTTATCCAGCCACAGATGATGGTTATTATACCATGGTTGGAGAAGGAGCTGGAGCAGGATATAATATAAATGTCCCTTGGGAGAA
TGCACGATGTGGGGATGCTGACTATCTAGCAGTTTGGGACCATATCTTGCTTCCTGTTGCCAAGGAATATAAACCTGATATGATCATAGTGTCTGCTGGATTTGATGCAG
GTCTGATGCTACTAACTTGA
Protein sequenceShow/hide protein sequence
MSWVMPVLAIGLLILAMTGHSIFGFFWLSLEMLVSELLGATWCVCKDGLGDAALQKTLDYACGAGADCISIHQNGGCFLPNTVKAHCSYATNSYFQKKGQALGSCDFSGT
AMVTTTDPSISGCVYPSSASPVSSGTIPVTGTPTTTNPGTGLTPTTNTPFGSTTPTGVLGGNGFGNGNNGLGPSGVGGMNTDYSDNGSRLQLTLIANGQIGFQYARWLAC
DVPVLDYRKVFVSSGTSLVRFFFEEMDVDSSGTRKFNGSNGDSWRVGVLYDERMCKHHTPGGDYHPENPNRIRAIWNKLQTAGILQRHYHFCFFISVLFCCVFALCCVEC
CEGSSEAAYLAAGSVIDVAERVAKGDLDSAIAIVRPPGHHAEHDKAMGFCLFNNIAVAASFILNERPDLGIKKILIVDWDVHHGNATQKMFWKDPRVLFFSVHRHEFGSF
YPATDDGYYTMVGEGAGAGYNINVPWENARCGDADYLAVWDHILLPVAKEYKPDMIIVSAGFDAGLMLLT