; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi06G014590 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G014590
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionHNH domain-containing protein
Genome locationchr06:25134486..25138224
RNA-Seq ExpressionLsi06G014590
SyntenyLsi06G014590
Gene Ontology termsGO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004519 - endonuclease activity (molecular function)
InterPro domainsIPR003615 - HNH nuclease


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138170.1 uncharacterized protein LOC101222461 [Cucumis sativus]1.7e-8489.07Show/hide
Query:  MRRSKESKKKTRPSSPLRDRTGASTRLESRRYGPNPSSLSPSASLLDRDLVTGESNLLGDLKLSPDDPVSDYNPRSFPHSVKQQCWDKAEKIKGRDPDRW
        MRRSKESKKKTRPSSPLRDRTG+ T LESR YG +PSSLSPSASLLDRDLVTGES+LLGDLK SPDD VS+YNPRSFPHSVKQQCWDKAEKIKGRDPDRW
Subjt:  MRRSKESKKKTRPSSPLRDRTGASTRLESRRYGPNPSSLSPSASLLDRDLVTGESNLLGDLKLSPDDPVSDYNPRSFPHSVKQQCWDKAEKIKGRDPDRW

Query:  RRDALGNIVFRKLVGCPGCLCHDYDHILPYSKAEFDYFILQGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSG
        RRDALGN VFRKLVGCPGCLCHDYDHILPYSK         GGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSG
Subjt:  RRDALGNIVFRKLVGCPGCLCHDYDHILPYSKAEFDYFILQGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSG

XP_008453210.1 PREDICTED: uncharacterized protein LOC103493997 [Cucumis melo]5.9e-8589.62Show/hide
Query:  MRRSKESKKKTRPSSPLRDRTGASTRLESRRYGPNPSSLSPSASLLDRDLVTGESNLLGDLKLSPDDPVSDYNPRSFPHSVKQQCWDKAEKIKGRDPDRW
        MRRSKESKKKTRPSSPLRDRTGA T LES RYG +PSSLSPSASLLDRDLVTGESNLLGDLK SP+D VS+YNPRSFPHSVKQQCWDKAEKIKGRDPDRW
Subjt:  MRRSKESKKKTRPSSPLRDRTGASTRLESRRYGPNPSSLSPSASLLDRDLVTGESNLLGDLKLSPDDPVSDYNPRSFPHSVKQQCWDKAEKIKGRDPDRW

Query:  RRDALGNIVFRKLVGCPGCLCHDYDHILPYSKAEFDYFILQGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSG
        RRDALGN VFRKLVGCPGCLCHDYDHILPYSK         GGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSG
Subjt:  RRDALGNIVFRKLVGCPGCLCHDYDHILPYSKAEFDYFILQGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSG

XP_022933556.1 uncharacterized protein LOC111440950 [Cucurbita moschata]6.8e-8185.79Show/hide
Query:  MRRSKESKKKTRPSSPLRDRTGASTRLESRRYGPNPSSLSPSASLLDRDLVTGESNLLGDLKLSPDDPVSDYNPRSFPHSVKQQCWDKAEKIKGRDPDRW
        MR SKESKKKTRPSSPLRDRT  S R ESRR+G + S LSPS SLLDRDLVT E+NLLGDLKLSPDD VSDYNPRSFP+SVKQQCWDKAEKIKGRDPDRW
Subjt:  MRRSKESKKKTRPSSPLRDRTGASTRLESRRYGPNPSSLSPSASLLDRDLVTGESNLLGDLKLSPDDPVSDYNPRSFPHSVKQQCWDKAEKIKGRDPDRW

Query:  RRDALGNIVFRKLVGCPGCLCHDYDHILPYSKAEFDYFILQGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSG
        RRDALGN VFRKLVGCPGCLCHDYDHILPYSK         GGKSTLENCQVLQATVNRSKGNRTE+SRAELIQKSSYCRVSG
Subjt:  RRDALGNIVFRKLVGCPGCLCHDYDHILPYSKAEFDYFILQGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSG

XP_022972967.1 uncharacterized protein LOC111471489 [Cucurbita maxima]3.6e-8286.89Show/hide
Query:  MRRSKESKKKTRPSSPLRDRTGASTRLESRRYGPNPSSLSPSASLLDRDLVTGESNLLGDLKLSPDDPVSDYNPRSFPHSVKQQCWDKAEKIKGRDPDRW
        MR SKESKKKTRPSSPLRDRT  STR ESRR+G N S LSPS SLLDRDLVT E+NLLGDLKLSPDD VSDYNPRSFP+SVKQQCWDKAEKIKGRDPDRW
Subjt:  MRRSKESKKKTRPSSPLRDRTGASTRLESRRYGPNPSSLSPSASLLDRDLVTGESNLLGDLKLSPDDPVSDYNPRSFPHSVKQQCWDKAEKIKGRDPDRW

Query:  RRDALGNIVFRKLVGCPGCLCHDYDHILPYSKAEFDYFILQGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSG
        RRDALGN VFRKLVGCPGCLCHDYDHILPYSK         GGKSTLENCQVLQATVNRSKGNRTE+SRAELIQKSSYCRVSG
Subjt:  RRDALGNIVFRKLVGCPGCLCHDYDHILPYSKAEFDYFILQGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSG

XP_038880609.1 uncharacterized protein LOC120072255 [Benincasa hispida]1.7e-8489.07Show/hide
Query:  MRRSKESKKKTRPSSPLRDRTGASTRLESRRYGPNPSSLSPSASLLDRDLVTGESNLLGDLKLSPDDPVSDYNPRSFPHSVKQQCWDKAEKIKGRDPDRW
        MRR+KESKKKTR SSPLRDRTG  T LESRRYG NPSSLSPSASLLDRDL+TGE++LLGDLKLSPDD VSDYNPRSFPHSVKQQCWDKAEKIKGRDP RW
Subjt:  MRRSKESKKKTRPSSPLRDRTGASTRLESRRYGPNPSSLSPSASLLDRDLVTGESNLLGDLKLSPDDPVSDYNPRSFPHSVKQQCWDKAEKIKGRDPDRW

Query:  RRDALGNIVFRKLVGCPGCLCHDYDHILPYSKAEFDYFILQGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSG
        RRDALGNIVFRKLVGCPGCLCHDYDHILPYSK         GGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSG
Subjt:  RRDALGNIVFRKLVGCPGCLCHDYDHILPYSKAEFDYFILQGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSG

TrEMBL top hitse value%identityAlignment
A0A0A0LUI5 HNH domain-containing protein8.3e-8589.07Show/hide
Query:  MRRSKESKKKTRPSSPLRDRTGASTRLESRRYGPNPSSLSPSASLLDRDLVTGESNLLGDLKLSPDDPVSDYNPRSFPHSVKQQCWDKAEKIKGRDPDRW
        MRRSKESKKKTRPSSPLRDRTG+ T LESR YG +PSSLSPSASLLDRDLVTGES+LLGDLK SPDD VS+YNPRSFPHSVKQQCWDKAEKIKGRDPDRW
Subjt:  MRRSKESKKKTRPSSPLRDRTGASTRLESRRYGPNPSSLSPSASLLDRDLVTGESNLLGDLKLSPDDPVSDYNPRSFPHSVKQQCWDKAEKIKGRDPDRW

Query:  RRDALGNIVFRKLVGCPGCLCHDYDHILPYSKAEFDYFILQGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSG
        RRDALGN VFRKLVGCPGCLCHDYDHILPYSK         GGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSG
Subjt:  RRDALGNIVFRKLVGCPGCLCHDYDHILPYSKAEFDYFILQGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSG

A0A1S3BWU4 uncharacterized protein LOC1034939972.9e-8589.62Show/hide
Query:  MRRSKESKKKTRPSSPLRDRTGASTRLESRRYGPNPSSLSPSASLLDRDLVTGESNLLGDLKLSPDDPVSDYNPRSFPHSVKQQCWDKAEKIKGRDPDRW
        MRRSKESKKKTRPSSPLRDRTGA T LES RYG +PSSLSPSASLLDRDLVTGESNLLGDLK SP+D VS+YNPRSFPHSVKQQCWDKAEKIKGRDPDRW
Subjt:  MRRSKESKKKTRPSSPLRDRTGASTRLESRRYGPNPSSLSPSASLLDRDLVTGESNLLGDLKLSPDDPVSDYNPRSFPHSVKQQCWDKAEKIKGRDPDRW

Query:  RRDALGNIVFRKLVGCPGCLCHDYDHILPYSKAEFDYFILQGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSG
        RRDALGN VFRKLVGCPGCLCHDYDHILPYSK         GGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSG
Subjt:  RRDALGNIVFRKLVGCPGCLCHDYDHILPYSKAEFDYFILQGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSG

A0A5A7US43 HNH endonuclease2.9e-8589.62Show/hide
Query:  MRRSKESKKKTRPSSPLRDRTGASTRLESRRYGPNPSSLSPSASLLDRDLVTGESNLLGDLKLSPDDPVSDYNPRSFPHSVKQQCWDKAEKIKGRDPDRW
        MRRSKESKKKTRPSSPLRDRTGA T LES RYG +PSSLSPSASLLDRDLVTGESNLLGDLK SP+D VS+YNPRSFPHSVKQQCWDKAEKIKGRDPDRW
Subjt:  MRRSKESKKKTRPSSPLRDRTGASTRLESRRYGPNPSSLSPSASLLDRDLVTGESNLLGDLKLSPDDPVSDYNPRSFPHSVKQQCWDKAEKIKGRDPDRW

Query:  RRDALGNIVFRKLVGCPGCLCHDYDHILPYSKAEFDYFILQGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSG
        RRDALGN VFRKLVGCPGCLCHDYDHILPYSK         GGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSG
Subjt:  RRDALGNIVFRKLVGCPGCLCHDYDHILPYSKAEFDYFILQGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSG

A0A6J1EZE0 uncharacterized protein LOC1114409503.3e-8185.79Show/hide
Query:  MRRSKESKKKTRPSSPLRDRTGASTRLESRRYGPNPSSLSPSASLLDRDLVTGESNLLGDLKLSPDDPVSDYNPRSFPHSVKQQCWDKAEKIKGRDPDRW
        MR SKESKKKTRPSSPLRDRT  S R ESRR+G + S LSPS SLLDRDLVT E+NLLGDLKLSPDD VSDYNPRSFP+SVKQQCWDKAEKIKGRDPDRW
Subjt:  MRRSKESKKKTRPSSPLRDRTGASTRLESRRYGPNPSSLSPSASLLDRDLVTGESNLLGDLKLSPDDPVSDYNPRSFPHSVKQQCWDKAEKIKGRDPDRW

Query:  RRDALGNIVFRKLVGCPGCLCHDYDHILPYSKAEFDYFILQGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSG
        RRDALGN VFRKLVGCPGCLCHDYDHILPYSK         GGKSTLENCQVLQATVNRSKGNRTE+SRAELIQKSSYCRVSG
Subjt:  RRDALGNIVFRKLVGCPGCLCHDYDHILPYSKAEFDYFILQGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSG

A0A6J1I688 uncharacterized protein LOC1114714891.7e-8286.89Show/hide
Query:  MRRSKESKKKTRPSSPLRDRTGASTRLESRRYGPNPSSLSPSASLLDRDLVTGESNLLGDLKLSPDDPVSDYNPRSFPHSVKQQCWDKAEKIKGRDPDRW
        MR SKESKKKTRPSSPLRDRT  STR ESRR+G N S LSPS SLLDRDLVT E+NLLGDLKLSPDD VSDYNPRSFP+SVKQQCWDKAEKIKGRDPDRW
Subjt:  MRRSKESKKKTRPSSPLRDRTGASTRLESRRYGPNPSSLSPSASLLDRDLVTGESNLLGDLKLSPDDPVSDYNPRSFPHSVKQQCWDKAEKIKGRDPDRW

Query:  RRDALGNIVFRKLVGCPGCLCHDYDHILPYSKAEFDYFILQGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSG
        RRDALGN VFRKLVGCPGCLCHDYDHILPYSK         GGKSTLENCQVLQATVNRSKGNRTE+SRAELIQKSSYCRVSG
Subjt:  RRDALGNIVFRKLVGCPGCLCHDYDHILPYSKAEFDYFILQGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G18680.1 HNH endonuclease domain-containing protein2.6e-2242.52Show/hide
Query:  PRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNIVFRKLVGCPGCLCHDYDHILPYSKAEFDYFILQGGKSTLENCQVLQATVNRSKGNRTEISRAELI
        PR F    K +CW  A+ + GR P+RWR+D  GNIV ++   C GCLC +YDHI+PYSK         GG+S  ENCQ+LQ  VNR K  +  +    L 
Subjt:  PRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNIVFRKLVGCPGCLCHDYDHILPYSKAEFDYFILQGGKSTLENCQVLQATVNRSKGNRTEISRAELI

Query:  QKSSYCRVSGTLVETWIFLNSLPMAMY
         KS  C +  T  E    L+ + MA+Y
Subjt:  QKSSYCRVSGTLVETWIFLNSLPMAMY

AT3G47490.1 HNH endonuclease2.1e-5161.85Show/hide
Query:  SSPLRDRTGASTRLESRRYG-PNPSSLSPSASLLDRDLVTGESNLLGDLKLSPDDPVSDYN--PRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNIVF
        SSP + R   S+   +R  G      +  SA+LLDR+          ++ L P     D N  PRSFP+SVKQQCW+KAEKIKGRDP+RWRRD LGNIVF
Subjt:  SSPLRDRTGASTRLESRRYG-PNPSSLSPSASLLDRDLVTGESNLLGDLKLSPDDPVSDYN--PRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNIVF

Query:  RKLVGCPGCLCHDYDHILPYSKAEFDYFILQGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSG
        RKLVGCPGCLCHDYDHI+PYSK         GGKSTLENCQVLQA VNRSKGN+T+ISR+ELIQ+SSYCRV+G
Subjt:  RKLVGCPGCLCHDYDHILPYSKAEFDYFILQGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSG

AT3G47490.2 HNH endonuclease8.1e-3258.2Show/hide
Query:  SSPLRDRTGASTRLESRRYG-PNPSSLSPSASLLDRDLVTGESNLLGDLKLSPDDPVSDYN--PRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNIVF
        SSP + R   S+   +R  G      +  SA+LLDR+          ++ L P     D N  PRSFP+SVKQQCW+KAEKIKGRDP+RWRRD LGNIVF
Subjt:  SSPLRDRTGASTRLESRRYG-PNPSSLSPSASLLDRDLVTGESNLLGDLKLSPDDPVSDYN--PRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNIVF

Query:  RKLVGCPGCLCHDYDHILPYSK
        RKLVGCPGCLCHDYDHI+PYSK
Subjt:  RKLVGCPGCLCHDYDHILPYSK

AT3G47490.3 HNH endonuclease4.1e-5259.24Show/hide
Query:  SSPLRDRTGASTRLESRRYG-PNPSSLSPSASLLDRDLVTGESNLLGDLKLSPDDPVSDYN--PRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNIVF
        SSP + R   S+   +R  G      +  SA+LLDR+          ++ L P     D N  PRSFP+SVKQQCW+KAEKIKGRDP+RWRRD LGNIVF
Subjt:  SSPLRDRTGASTRLESRRYG-PNPSSLSPSASLLDRDLVTGESNLLGDLKLSPDDPVSDYN--PRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNIVF

Query:  RKLVGCPGCLCHDYDHILPYSK-----------AEFDYFILQGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSG
        RKLVGCPGCLCHDYDHI+PYSK              D+  L+GGKSTLENCQVLQA VNRSKGN+T+ISR+ELIQ+SSYCRV+G
Subjt:  RKLVGCPGCLCHDYDHILPYSK-----------AEFDYFILQGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCGTAGCAAAGAATCGAAGAAGAAAACTCGGCCGTCATCACCGCTCAGGGACCGAACCGGTGCTTCAACGAGGCTCGAATCAAGGCGTTATGGGCCTAACCCATC
AAGCCTCAGCCCCTCTGCATCGCTTTTGGACCGGGACCTCGTCACTGGCGAATCCAATCTCCTCGGAGACCTAAAACTCTCTCCCGATGACCCAGTTTCCGACTACAATC
CCCGGAGCTTTCCTCACAGTGTGAAGCAGCAATGTTGGGATAAGGCCGAGAAGATTAAAGGAAGAGACCCAGATCGGTGGCGACGAGATGCTCTTGGTAACATCGTTTTT
CGGAAGCTTGTTGGCTGCCCTGGCTGTCTCTGTCATGACTATGATCACATTTTGCCTTACTCTAAGGCTGAGTTTGACTACTTCATATTGCAGGGAGGAAAAAGCACACT
GGAAAATTGTCAAGTTTTGCAGGCAACTGTGAATCGATCAAAGGGAAACCGGACTGAAATTTCAAGGGCAGAACTAATACAGAAAAGCTCTTACTGCCGGGTTTCAGGTA
CACTAGTCGAGACATGGATCTTCTTGAACTCTCTGCCTATGGCAATGTACATCGTGGACAAGACTCAGGAGGGTGTAGAATTCAATGACTAA
mRNA sequenceShow/hide mRNA sequence
AAGCTAAATAACCCATAGACGACTTGTCGTTTATCAAGTGAAACGAAATAACAAAGGAGGACTACCCATTATGACCTCTCAAATTATTCACGAACGAGTCAAAGATGAGG
CGTAGCAAAGAATCGAAGAAGAAAACTCGGCCGTCATCACCGCTCAGGGACCGAACCGGTGCTTCAACGAGGCTCGAATCAAGGCGTTATGGGCCTAACCCATCAAGCCT
CAGCCCCTCTGCATCGCTTTTGGACCGGGACCTCGTCACTGGCGAATCCAATCTCCTCGGAGACCTAAAACTCTCTCCCGATGACCCAGTTTCCGACTACAATCCCCGGA
GCTTTCCTCACAGTGTGAAGCAGCAATGTTGGGATAAGGCCGAGAAGATTAAAGGAAGAGACCCAGATCGGTGGCGACGAGATGCTCTTGGTAACATCGTTTTTCGGAAG
CTTGTTGGCTGCCCTGGCTGTCTCTGTCATGACTATGATCACATTTTGCCTTACTCTAAGGCTGAGTTTGACTACTTCATATTGCAGGGAGGAAAAAGCACACTGGAAAA
TTGTCAAGTTTTGCAGGCAACTGTGAATCGATCAAAGGGAAACCGGACTGAAATTTCAAGGGCAGAACTAATACAGAAAAGCTCTTACTGCCGGGTTTCAGGTACACTAG
TCGAGACATGGATCTTCTTGAACTCTCTGCCTATGGCAATGTACATCGTGGACAAGACTCAGGAGGGTGTAGAATTCAATGACTAATTGAGTGATAATATTATAACCTGT
AGTAGAATTGATTCAGTGTGAGACGTGGAAACTTAACAAAAAAAAGAAAAAACACAAAGATTGAAATGAAAAAGTAGGGAATTTTTCCCATGTTCTTATTTCATTCCTTT
ATAGATTGGATACGTATGTATCGTTTATGTGAACAAGCTCATTGGTTGCATACGAAGTGTTGCTTTATGCCTTCATGTCTGATCTGATGTATGTAGAGAACCTATGATTG
AAGGGTTACAGTTCAAAAGTAAGATTTATGATATTGGAAAGGAAAGAAGTGAAAGAAAAAGCAAGTTGTGAATACATTTGTAAAGTTAAAATTCTTACCAATCCATCCCA
CTATCAGGCAATTGAGAAATTGGAAGTTCCTTTCTTCTTTTTCTTTGCGTTATAGGGAAGTGATGCTTCACATCCACACTTTCTTGTGGATGCTTTTTGAAACAAAAGAA
TTTTTACCTACTTTGGTTCTATCAAATGTGACAGCAACAGGAAGAAACTGGGCCATTAAGTAACTCAGTCTTAGTGGATGGGATTCATTACTTTGACCTTTTCGAATAAT
TTTACTTTTTACTTTTTGAAGCCAGATTTCTATTGGATACCAAA
Protein sequenceShow/hide protein sequence
MRRSKESKKKTRPSSPLRDRTGASTRLESRRYGPNPSSLSPSASLLDRDLVTGESNLLGDLKLSPDDPVSDYNPRSFPHSVKQQCWDKAEKIKGRDPDRWRRDALGNIVF
RKLVGCPGCLCHDYDHILPYSKAEFDYFILQGGKSTLENCQVLQATVNRSKGNRTEISRAELIQKSSYCRVSGTLVETWIFLNSLPMAMYIVDKTQEGVEFND