CuGenDBv2

Gene ID	Lsi06G014790
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	ABC transporter A family member 7-like
Genome location	chr06:25280780..25281043
RNA-Seq Expression	Lsi06G014790
Synteny	Lsi06G014790
Gene Ontology terms	GO:0006869 - lipid transport (biological process) GO:0055085 - transmembrane transport (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0043231 - intracellular membrane-bounded organelle (cellular component) GO:0005319 - lipid transporter activity (molecular function) GO:0005524 - ATP binding (molecular function) GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domains	IPR026082 - ABC transporter A

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004138156.1 ABC transporter A family member 7 [Cucumis sativus]

1.9e-37

93.1

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Query:  MTTSANHDVDVENMVKNLSPGANKIYHISGTQKFELPKDEVRIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQAFNVLS
        MTTSANH+VDVENMVKNLSP A+KIYHISGTQKFELPK EVRIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQ+FN LS
Subjt:  MTTSANHDVDVENMVKNLSPGANKIYHISGTQKFELPKDEVRIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQAFNVLS

XP_022135440.1 ABC transporter A family member 7-like [Momordica charantia]

6.5e-38

95.4

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Query:  MTTSANHDVDVENMVKNLSPGANKIYHISGTQKFELPKDEVRIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQAFNVLS
        MTTSANHD DVENMVK+LSPGA+KIYHISGTQKFELPK EVRIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQAFNVLS
Subjt:  MTTSANHDVDVENMVKNLSPGANKIYHISGTQKFELPKDEVRIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQAFNVLS

XP_022159341.1 ABC transporter A family member 7-like [Momordica charantia]

3.8e-38

95.4

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Query:  MTTSANHDVDVENMVKNLSPGANKIYHISGTQKFELPKDEVRIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQAFNVLS
        MTTSANHDVDVENMVK LSPGA+KIYHISGTQKFELPK EV+IGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQAFNVLS
Subjt:  MTTSANHDVDVENMVKNLSPGANKIYHISGTQKFELPKDEVRIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQAFNVLS

XP_022972286.1 ABC transporter A family member 7-like [Cucurbita maxima]

4.2e-37

93.1

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Query:  MTTSANHDVDVENMVKNLSPGANKIYHISGTQKFELPKDEVRIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQAFNVLS
        MTTSANHDVDVENMVK+LSPGA+KIYHISGTQKFELPK EVRI DVFQAVENAKSRF VFAWGLADTTLEDVFIKVARGAQ+FNVLS
Subjt:  MTTSANHDVDVENMVKNLSPGANKIYHISGTQKFELPKDEVRIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQAFNVLS

XP_038878356.1 ABC transporter A family member 7-like [Benincasa hispida]

2.6e-39

97.7

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Query:  MTTSANHDVDVENMVKNLSPGANKIYHISGTQKFELPKDEVRIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQAFNVLS
        MTTSANHDVDVENMVKNLSPGA+KIYHISGTQKFELPK EVRIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQAFNVLS
Subjt:  MTTSANHDVDVENMVKNLSPGANKIYHISGTQKFELPKDEVRIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQAFNVLS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LS95 ABC transporter domain-containing protein

9.1e-38

93.1

Show/hide

Query:  MTTSANHDVDVENMVKNLSPGANKIYHISGTQKFELPKDEVRIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQAFNVLS
        MTTSANH+VDVENMVKNLSP A+KIYHISGTQKFELPK EVRIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQ+FN LS
Subjt:  MTTSANHDVDVENMVKNLSPGANKIYHISGTQKFELPKDEVRIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQAFNVLS

A0A6J1C131 ABC transporter A family member 7-like

3.1e-38

95.4

Show/hide

Query:  MTTSANHDVDVENMVKNLSPGANKIYHISGTQKFELPKDEVRIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQAFNVLS
        MTTSANHD DVENMVK+LSPGA+KIYHISGTQKFELPK EVRIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQAFNVLS
Subjt:  MTTSANHDVDVENMVKNLSPGANKIYHISGTQKFELPKDEVRIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQAFNVLS

A0A6J1E3M4 ABC transporter A family member 7-like

1.8e-38

95.4

Show/hide

Query:  MTTSANHDVDVENMVKNLSPGANKIYHISGTQKFELPKDEVRIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQAFNVLS
        MTTSANHDVDVENMVK LSPGA+KIYHISGTQKFELPK EV+IGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQAFNVLS
Subjt:  MTTSANHDVDVENMVKNLSPGANKIYHISGTQKFELPKDEVRIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQAFNVLS

A0A6J1EWM8 ABC transporter A family member 7-like

7.7e-37

91.95

Show/hide

Query:  MTTSANHDVDVENMVKNLSPGANKIYHISGTQKFELPKDEVRIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQAFNVLS
        MTTSANHDVDVE+MVK+LSPGA+KIYHISGTQKFELPK EVRI DVFQAVENAKSRF VFAWGLADTTLEDVFIKVARGAQ+FNVLS
Subjt:  MTTSANHDVDVENMVKNLSPGANKIYHISGTQKFELPKDEVRIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQAFNVLS

A0A6J1I5K3 ABC transporter A family member 7-like

2.0e-37

93.1

Show/hide

Query:  MTTSANHDVDVENMVKNLSPGANKIYHISGTQKFELPKDEVRIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQAFNVLS
        MTTSANHDVDVENMVK+LSPGA+KIYHISGTQKFELPK EVRI DVFQAVENAKSRF VFAWGLADTTLEDVFIKVARGAQ+FNVLS
Subjt:  MTTSANHDVDVENMVKNLSPGANKIYHISGTQKFELPKDEVRIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQAFNVLS

SwissProt top hits

e value

%identity

Alignment

Q1PEH6 ABC transporter A family member 3

3.6e-31

74.71

Show/hide

Query:  MTTSANHDVDVENMVKNLSPGANKIYHISGTQKFELPKDEVRIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQAFNVLS
        MTTS+ H+ DVE +V+ +SP   KIYHI+GTQKFE+PKDEVRI +VFQ VE AKS F VFAWGLADTTLEDVFIKVAR AQAFNV S
Subjt:  MTTSANHDVDVENMVKNLSPGANKIYHISGTQKFELPKDEVRIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQAFNVLS

Q9FLT8 ABC transporter A family member 12

6.7e-30

72.41

Show/hide

Query:  MTTSANHDVDVENMVKNLSPGANKIYHISGTQKFELPKDEVRIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQAFNVLS
        MTTS+ H+ +VE +V+++SP A KIYH++GTQKFELPK EVRI +VF+AVE AK+ FTVFAWGLADTTLEDVFIKVAR AQAF  LS
Subjt:  MTTSANHDVDVENMVKNLSPGANKIYHISGTQKFELPKDEVRIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQAFNVLS

Q9STT5 ABC transporter A family member 7

5.5e-32

74.71

Show/hide

Query:  MTTSANHDVDVENMVKNLSPGANKIYHISGTQKFELPKDEVRIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQAFNVLS
        MTTS+ H+ +VE ++K++SP A KIYHI+GTQKFELPK+EVRI +VFQAVE AKS FTVFAWGLADTTLEDVFIKV R  QAFNV S
Subjt:  MTTSANHDVDVENMVKNLSPGANKIYHISGTQKFELPKDEVRIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQAFNVLS

Q9STT7 ABC transporter A family member 5

8.8e-30

72.41

Show/hide

Query:  MTTSANHDVDVENMVKNLSPGANKIYHISGTQKFELPKDEVRIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQAFNVLS
        MTT + H+ DVE +V+++SP A KIYHI+GTQKFE+PK+EVRI +VFQAVE AK  F VFAWGLADTTLEDVFIKVAR AQA NV S
Subjt:  MTTSANHDVDVENMVKNLSPGANKIYHISGTQKFELPKDEVRIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQAFNVLS

Q9STT8 ABC transporter A family member 4

2.3e-30

72.41

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Query:  MTTSANHDVDVENMVKNLSPGANKIYHISGTQKFELPKDEVRIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQAFNVLS
        MTTS+ H+ DVE +++++SP A KIYHI+GTQKFE+PKDEVRI ++FQAVE AK  F VFAWGLADTTLEDVFIKVAR AQA NV S
Subjt:  MTTSANHDVDVENMVKNLSPGANKIYHISGTQKFELPKDEVRIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQAFNVLS

Arabidopsis top hits

e value

%identity

Alignment

AT3G47740.1 ABC2 homolog 2

2.5e-32

74.71

Show/hide

Query:  MTTSANHDVDVENMVKNLSPGANKIYHISGTQKFELPKDEVRIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQAFNVLS
        MTTS+ H+ DVE +V+ +SP   KIYHI+GTQKFE+PKDEVRI +VFQ VE AKS F VFAWGLADTTLEDVFIKVAR AQAFNV S
Subjt:  MTTSANHDVDVENMVKNLSPGANKIYHISGTQKFELPKDEVRIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQAFNVLS

AT3G47750.1 ATP binding cassette subfamily A4

1.6e-31

72.41

Show/hide

Query:  MTTSANHDVDVENMVKNLSPGANKIYHISGTQKFELPKDEVRIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQAFNVLS
        MTTS+ H+ DVE +++++SP A KIYHI+GTQKFE+PKDEVRI ++FQAVE AK  F VFAWGLADTTLEDVFIKVAR AQA NV S
Subjt:  MTTSANHDVDVENMVKNLSPGANKIYHISGTQKFELPKDEVRIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQAFNVLS

AT3G47760.1 ABC2 homolog 4

6.2e-31

72.41

Show/hide

Query:  MTTSANHDVDVENMVKNLSPGANKIYHISGTQKFELPKDEVRIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQAFNVLS
        MTT + H+ DVE +V+++SP A KIYHI+GTQKFE+PK+EVRI +VFQAVE AK  F VFAWGLADTTLEDVFIKVAR AQA NV S
Subjt:  MTTSANHDVDVENMVKNLSPGANKIYHISGTQKFELPKDEVRIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQAFNVLS

AT3G47780.1 ABC2 homolog 6

3.9e-33

74.71

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Query:  MTTSANHDVDVENMVKNLSPGANKIYHISGTQKFELPKDEVRIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQAFNVLS
        MTTS+ H+ +VE ++K++SP A KIYHI+GTQKFELPK+EVRI +VFQAVE AKS FTVFAWGLADTTLEDVFIKV R  QAFNV S
Subjt:  MTTSANHDVDVENMVKNLSPGANKIYHISGTQKFELPKDEVRIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQAFNVLS

AT5G61700.1 ABC2 homolog 16

4.8e-31

72.41

Show/hide

Query:  MTTSANHDVDVENMVKNLSPGANKIYHISGTQKFELPKDEVRIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQAFNVLS
        MTTS+ H+ +VE +V+++SP A KIYH++GTQKFELPK EVRI +VF+AVE AK+ FTVFAWGLADTTLEDVFIKVAR AQAF  LS
Subjt:  MTTSANHDVDVENMVKNLSPGANKIYHISGTQKFELPKDEVRIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQAFNVLS

Sequences

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CDS sequence

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ATGACTACATCTGCGAATCACGATGTCGACGTCGAGAACATGGTGAAGAATCTCTCTCCCGGTGCCAACAAGATCTACCACATCTCAGGAACTCAGAAGTTCGAATTGCC
AAAAGACGAGGTCCGAATAGGCGACGTGTTTCAAGCAGTGGAGAATGCAAAGAGTAGGTTCACAGTCTTTGCTTGGGGGCTTGCTGACACAACATTGGAGGATGTCTTTA
TTAAGGTTGCTCGAGGAGCCCAAGCATTCAATGTTCTTTCATAG

mRNA sequence

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Protein sequence

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MTTSANHDVDVENMVKNLSPGANKIYHISGTQKFELPKDEVRIGDVFQAVENAKSRFTVFAWGLADTTLEDVFIKVARGAQAFNVLS

Lsi06G014790 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome