; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi06G014920 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G014920
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUbiquitin carboxyl-terminal hydrolase-related protein
Genome locationchr06:25393824..25394522
RNA-Seq ExpressionLsi06G014920
SyntenyLsi06G014920
Gene Ontology termsGO:0016579 - protein deubiquitination (biological process)
GO:0004843 - thiol-dependent ubiquitin-specific protease activity (molecular function)
InterPro domainsIPR006865 - Domain of unknown function DUF629


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB1216689.1 Inactive ubiquitin carboxyl-terminal hydrolase 54 [Morella rubra]6.1e-0860.34Show/hide
Query:  SDQSDRKNLLEEIHLVFELLVEQRYLAASHVNEVIQFTIDELQGLMSESGYAPLHVTQ
        SD ++R  LLE IH VFE+L+  +YLAASH+N+VIQFT+DELQGL S S    L V Q
Subjt:  SDQSDRKNLLEEIHLVFELLVEQRYLAASHVNEVIQFTIDELQGLMSESGYAPLHVTQ
XP_011659938.1 uncharacterized protein LOC101212702 [Cucumis sativus]1.4e-0740Show/hide
Query:  CYWKPWIFQPKQISAHSNIQDVMISED--------------SDQSDRKNLLEEIHLVFELLVEQRYLAASHVNEVIQFTIDELQGLMSES
        C    W F P++    +++ +  + E               SD S+R  LLE+IH VFELL++ +YLAAS +N++IQFT+DELQG++S S
Subjt:  CYWKPWIFQPKQISAHSNIQDVMISED--------------SDQSDRKNLLEEIHLVFELLVEQRYLAASHVNEVIQFTIDELQGLMSES
XP_022135261.1 uncharacterized protein LOC111007268 isoform X1 [Momordica charantia]7.9e-0866.67Show/hide
Query:  SDQSDRKNLLEEIHLVFELLVEQRYLAASHVNEVIQFTIDELQGLMSESGY
        SD S+R  LLE+IH +FELL+  +YLAASH+N+VIQFT+DELQGL   SGY
Subjt:  SDQSDRKNLLEEIHLVFELLVEQRYLAASHVNEVIQFTIDELQGLMSESGY
XP_022135262.1 uncharacterized protein LOC111007268 isoform X2 [Momordica charantia]7.9e-0866.67Show/hide
Query:  SDQSDRKNLLEEIHLVFELLVEQRYLAASHVNEVIQFTIDELQGLMSESGY
        SD S+R  LLE+IH +FELL+  +YLAASH+N+VIQFT+DELQGL   SGY
Subjt:  SDQSDRKNLLEEIHLVFELLVEQRYLAASHVNEVIQFTIDELQGLMSESGY
XP_022135263.1 uncharacterized protein LOC111007268 isoform X3 [Momordica charantia]7.9e-0866.67Show/hide
Query:  SDQSDRKNLLEEIHLVFELLVEQRYLAASHVNEVIQFTIDELQGLMSESGY
        SD S+R  LLE+IH +FELL+  +YLAASH+N+VIQFT+DELQGL   SGY
Subjt:  SDQSDRKNLLEEIHLVFELLVEQRYLAASHVNEVIQFTIDELQGLMSESGY
TrEMBL top hitse value%identityAlignment
A0A0A0LPB2 USP domain-containing protein6.6e-0840Show/hide
Query:  CYWKPWIFQPKQISAHSNIQDVMISED--------------SDQSDRKNLLEEIHLVFELLVEQRYLAASHVNEVIQFTIDELQGLMSES
        C    W F P++    +++ +  + E               SD S+R  LLE+IH VFELL++ +YLAAS +N++IQFT+DELQG++S S
Subjt:  CYWKPWIFQPKQISAHSNIQDVMISED--------------SDQSDRKNLLEEIHLVFELLVEQRYLAASHVNEVIQFTIDELQGLMSES
A0A6A1VUS3 Inactive ubiquitin carboxyl-terminal hydrolase 542.9e-0860.34Show/hide
Query:  SDQSDRKNLLEEIHLVFELLVEQRYLAASHVNEVIQFTIDELQGLMSESGYAPLHVTQ
        SD ++R  LLE IH VFE+L+  +YLAASH+N+VIQFT+DELQGL S S    L V Q
Subjt:  SDQSDRKNLLEEIHLVFELLVEQRYLAASHVNEVIQFTIDELQGLMSESGYAPLHVTQ
A0A6J1C064 uncharacterized protein LOC111007268 isoform X13.8e-0866.67Show/hide
Query:  SDQSDRKNLLEEIHLVFELLVEQRYLAASHVNEVIQFTIDELQGLMSESGY
        SD S+R  LLE+IH +FELL+  +YLAASH+N+VIQFT+DELQGL   SGY
Subjt:  SDQSDRKNLLEEIHLVFELLVEQRYLAASHVNEVIQFTIDELQGLMSESGY
A0A6J1C274 uncharacterized protein LOC111007268 isoform X23.8e-0866.67Show/hide
Query:  SDQSDRKNLLEEIHLVFELLVEQRYLAASHVNEVIQFTIDELQGLMSESGY
        SD S+R  LLE+IH +FELL+  +YLAASH+N+VIQFT+DELQGL   SGY
Subjt:  SDQSDRKNLLEEIHLVFELLVEQRYLAASHVNEVIQFTIDELQGLMSESGY
A0A6J1C4C5 uncharacterized protein LOC111007268 isoform X33.8e-0866.67Show/hide
Query:  SDQSDRKNLLEEIHLVFELLVEQRYLAASHVNEVIQFTIDELQGLMSESGY
        SD S+R  LLE+IH +FELL+  +YLAASH+N+VIQFT+DELQGL   SGY
Subjt:  SDQSDRKNLLEEIHLVFELLVEQRYLAASHVNEVIQFTIDELQGLMSESGY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G47890.1 Ubiquitin carboxyl-terminal hydrolase-related protein1.0e-0856.86Show/hide
Query:  SDQSDRKNLLEEIHLVFELLVEQRYLAASHVNEVIQFTIDELQGLMSESGY
        SD  +R  LLE+I   FELL+  +YLAASH ++VIQFT+DELQ L S S +
Subjt:  SDQSDRKNLLEEIHLVFELLVEQRYLAASHVNEVIQFTIDELQGLMSESGY
AT3G47910.1 Ubiquitin carboxyl-terminal hydrolase-related protein6.5e-0854.9Show/hide
Query:  SDQSDRKNLLEEIHLVFELLVEQRYLAASHVNEVIQFTIDELQGLMSESGY
        SD  +R  LLE+I   FE L+  +YLAASH ++VIQFT+DELQ L S S +
Subjt:  SDQSDRKNLLEEIHLVFELLVEQRYLAASHVNEVIQFTIDELQGLMSESGY
AT3G47910.2 Ubiquitin carboxyl-terminal hydrolase-related protein6.5e-0854.9Show/hide
Query:  SDQSDRKNLLEEIHLVFELLVEQRYLAASHVNEVIQFTIDELQGLMSESGY
        SD  +R  LLE+I   FE L+  +YLAASH ++VIQFT+DELQ L S S +
Subjt:  SDQSDRKNLLEEIHLVFELLVEQRYLAASHVNEVIQFTIDELQGLMSESGY

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCTGAACTGTTATTGGAAACCTTGGATATTTCAGCCAAAACAAATATCTGCCCACAGCAACATTCAAGATGTGATGATATCTGAGGACTCTGATCAATCCGATCG
TAAAAATCTTCTCGAGGAAATTCATTTGGTGTTTGAGTTGCTTGTAGAACAGAGATATCTTGCCGCAAGCCATGTAAACGAGGTTATACAGTTTACGATAGATGAGTTAC
AGGGTCTTATGTCGGAATCTGGATATGCTCCTCTGCATGTCACTCAGATAGGAAAACTGATCGAGATTCAAAGAGTGCTGGTGATGCTGCTGTTCGTGTTTGTGACCATC
GCCGTTATGACCGTCCTACTTACGTGGGTCCTGAGGGTTCCCGTCCTATCCGTCCTCCCCGTCGTCCAGCTAGGAACAACTCCTATTCCTGCAGATGCATTCTGTTTTGC
GTCGCAAATAGAGGTGACTGTCGCCACTGCCGCCAGCCATGCAACATCCGATGTTGGTGTGTATGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTCTGAACTGTTATTGGAAACCTTGGATATTTCAGCCAAAACAAATATCTGCCCACAGCAACATTCAAGATGTGATGATATCTGAGGACTCTGATCAATCCGATCG
TAAAAATCTTCTCGAGGAAATTCATTTGGTGTTTGAGTTGCTTGTAGAACAGAGATATCTTGCCGCAAGCCATGTAAACGAGGTTATACAGTTTACGATAGATGAGTTAC
AGGGTCTTATGTCGGAATCTGGATATGCTCCTCTGCATGTCACTCAGATAGGAAAACTGATCGAGATTCAAAGAGTGCTGGTGATGCTGCTGTTCGTGTTTGTGACCATC
GCCGTTATGACCGTCCTACTTACGTGGGTCCTGAGGGTTCCCGTCCTATCCGTCCTCCCCGTCGTCCAGCTAGGAACAACTCCTATTCCTGCAGATGCATTCTGTTTTGC
GTCGCAAATAGAGGTGACTGTCGCCACTGCCGCCAGCCATGCAACATCCGATGTTGGTGTGTATGTGTAA
Protein sequenceShow/hide protein sequence
MILNCYWKPWIFQPKQISAHSNIQDVMISEDSDQSDRKNLLEEIHLVFELLVEQRYLAASHVNEVIQFTIDELQGLMSESGYAPLHVTQIGKLIEIQRVLVMLLFVFVTI
AVMTVLLTWVLRVPVLSVLPVVQLGTTPIPADAFCFASQIEVTVATAASHATSDVGVYV