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Lsi06G015110 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G015110
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionARM repeat superfamily protein
Genome locationchr06:25537940..25540113
RNA-Seq ExpressionLsi06G015110
SyntenyLsi06G015110
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFY88357.1 ARM repeat superfamily protein [Actinidia rufa]2.0e-0961.19Show/hide
Query:  GSGAASIAEAKHKAAPICELESCSVKSESVKGFKNVENGGLVTLEANAATELTQADRTDESGSRNRR
        GSG ASIA A+H   PICEL+SCS +  S  GF+N +NGGLV  EA  AT  TQA+RT ES SR RR
Subjt:  GSGAASIAEAKHKAAPICELESCSVKSESVKGFKNVENGGLVTLEANAATELTQADRTDESGSRNRR
KAG7021484.1 hypothetical protein SDJN02_15209, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-4386.21Show/hide
Query:  SSVALLATTVDSGNSSGQGTTRDPDLNPPNLIVLSSEILGKSARFVSGFEILDFSLNLLSGMFSSLSFSSPEEDFLTETSTFQSRGFLRSTFWSIDKLAF
        SSV LLATTVDSG SSG GTTRDPDLNPPNLI+LSSEIL KSARFVSGFEIL FSLNLLSGM+SSLSF SPE DFLTETSTFQSRGFLRSTFW+IDKL F
Subjt:  SSVALLATTVDSGNSSGQGTTRDPDLNPPNLIVLSSEILGKSARFVSGFEILDFSLNLLSGMFSSLSFSSPEEDFLTETSTFQSRGFLRSTFWSIDKLAF

Query:  LPPPLKGLLLLAAVAE
        L PP K LLLLA VA+
Subjt:  LPPPLKGLLLLAAVAE
TrEMBL top hitse value%identityAlignment
A0A7J0ES24 ARM repeat superfamily protein9.9e-1061.19Show/hide
Query:  GSGAASIAEAKHKAAPICELESCSVKSESVKGFKNVENGGLVTLEANAATELTQADRTDESGSRNRR
        GSG ASIA A+H   PICEL+SCS +  S  GF+N +NGGLV  EA  AT  TQA+RT ES SR RR
Subjt:  GSGAASIAEAKHKAAPICELESCSVKSESVKGFKNVENGGLVTLEANAATELTQADRTDESGSRNRR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGGCTGGTTACGGATCAAATGCAATTCTTCAGAGTCTTTGTGGTTCCTGTGCAAATCGTCGGTTGCATTACTTGCTACAACAGTCGATTCAGGTAACTCCTCGGG
ACAAGGAACTACGCGAGATCCAGACCTGAACCCACCGAATTTAATTGTCTTATCGTCAGAAATCTTAGGGAAGAGTGCCCGTTTTGTTTCTGGTTTCGAAATCTTGGATT
TCTCACTAAACCTTCTATCCGGAATGTTTTCATCTCTTTCCTTCAGTTCTCCTGAGGAAGACTTCCTAACAGAGACTTCTACTTTCCAGTCCAGAGGCTTCTTACGCTCA
ACCTTTTGGAGCATTGACAAACTTGCTTTCTTGCCACCACCGCTCAAAGGACTTCTCCTTCTCGCTGCCGTCGCAGAAACTGAAACCTTATCGAATCGCCGACTCTCGAG
CGTTTTCAAGCAACCAGCCTTGAACTCCGCCAGAGCATCCCTCTCCACGACTGCTAGCTTACCTAGCGCCTCCGCCGCAGATTTTCTCGCCGCCCAATCCTCACTGCTGA
GGAATGCAACCAAGCACGGGACCAAATTTTTCAGAGCTCCATTACCGAAAGCTCCATCAACTCCAATAACACTCCCGATCAGTGTCAAGAGAGCCGGCTTTGCCTTGAAA
CTCTCGCATTTCAACAGCTTCTCAAACCTCGGCAAAAGCTTGCCGAGCTTAACCGGATCCGGATCCGGTGCAGCATCAATTGCTGAAGCCAAACACAAAGCCGCTCCGAT
CTGCGAATTAGAATCCTGTTCCGTGAAAAGCGAATCCGTTAAAGGCTTCAAAAATGTCGAAAACGGCGGTTTGGTAACACTGGAAGCTAATGCGGCTACAGAGTTAACAC
AGGCGGATCGGACCGACGAATCAGGATCGCGGAACCGGCGTGTAATGTTGGAGAGAATCTTCGATAGCAAAGAGACGAATGCATTGCTTCCTCACCAGCGATTTATCCGA
GGCATCAGTGGAGTATATACAGGAAAGGAAAATCGGCAAGGAATTTGCGTCAAGACTCCGAGCAATGGATTCGAGCTCGGATGCAGCAAGGGAGTAGGTATCTCTGTCGG
AGAGCTTGGTGAGGCAGGAGAGAATCCGAAGCTTCAGGCTCTGCGGCGCAGAGGCAGAGAGAGCCATGACGAGAGGAACAGTAGTCGGAAGCGAAGTCAGACCTCAGGCG
GCGGCGATAGAGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGGCTGGTTACGGATCAAATGCAATTCTTCAGAGTCTTTGTGGTTCCTGTGCAAATCGTCGGTTGCATTACTTGCTACAACAGTCGATTCAGGTAACTCCTCGGG
ACAAGGAACTACGCGAGATCCAGACCTGAACCCACCGAATTTAATTGTCTTATCGTCAGAAATCTTAGGGAAGAGTGCCCGTTTTGTTTCTGGTTTCGAAATCTTGGATT
TCTCACTAAACCTTCTATCCGGAATGTTTTCATCTCTTTCCTTCAGTTCTCCTGAGGAAGACTTCCTAACAGAGACTTCTACTTTCCAGTCCAGAGGCTTCTTACGCTCA
ACCTTTTGGAGCATTGACAAACTTGCTTTCTTGCCACCACCGCTCAAAGGACTTCTCCTTCTCGCTGCCGTCGCAGAAACTGAAACCTTATCGAATCGCCGACTCTCGAG
CGTTTTCAAGCAACCAGCCTTGAACTCCGCCAGAGCATCCCTCTCCACGACTGCTAGCTTACCTAGCGCCTCCGCCGCAGATTTTCTCGCCGCCCAATCCTCACTGCTGA
GGAATGCAACCAAGCACGGGACCAAATTTTTCAGAGCTCCATTACCGAAAGCTCCATCAACTCCAATAACACTCCCGATCAGTGTCAAGAGAGCCGGCTTTGCCTTGAAA
CTCTCGCATTTCAACAGCTTCTCAAACCTCGGCAAAAGCTTGCCGAGCTTAACCGGATCCGGATCCGGTGCAGCATCAATTGCTGAAGCCAAACACAAAGCCGCTCCGAT
CTGCGAATTAGAATCCTGTTCCGTGAAAAGCGAATCCGTTAAAGGCTTCAAAAATGTCGAAAACGGCGGTTTGGTAACACTGGAAGCTAATGCGGCTACAGAGTTAACAC
AGGCGGATCGGACCGACGAATCAGGATCGCGGAACCGGCGTGTAATGTTGGAGAGAATCTTCGATAGCAAAGAGACGAATGCATTGCTTCCTCACCAGCGATTTATCCGA
GGCATCAGTGGAGTATATACAGGAAAGGAAAATCGGCAAGGAATTTGCGTCAAGACTCCGAGCAATGGATTCGAGCTCGGATGCAGCAAGGGAGTAGGTATCTCTGTCGG
AGAGCTTGGTGAGGCAGGAGAGAATCCGAAGCTTCAGGCTCTGCGGCGCAGAGGCAGAGAGAGCCATGACGAGAGGAACAGTAGTCGGAAGCGAAGTCAGACCTCAGGCG
GCGGCGATAGAGGTTGA
Protein sequenceShow/hide protein sequence
MAGWLRIKCNSSESLWFLCKSSVALLATTVDSGNSSGQGTTRDPDLNPPNLIVLSSEILGKSARFVSGFEILDFSLNLLSGMFSSLSFSSPEEDFLTETSTFQSRGFLRS
TFWSIDKLAFLPPPLKGLLLLAAVAETETLSNRRLSSVFKQPALNSARASLSTTASLPSASAADFLAAQSSLLRNATKHGTKFFRAPLPKAPSTPITLPISVKRAGFALK
LSHFNSFSNLGKSLPSLTGSGSGAASIAEAKHKAAPICELESCSVKSESVKGFKNVENGGLVTLEANAATELTQADRTDESGSRNRRVMLERIFDSKETNALLPHQRFIR
GISGVYTGKENRQGICVKTPSNGFELGCSKGVGISVGELGEAGENPKLQALRRRGRESHDERNSSRKRSQTSGGGDRG