; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi06G015120 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G015120
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRING-type domain-containing protein
Genome locationchr06:25555093..25556878
RNA-Seq ExpressionLsi06G015120
SyntenyLsi06G015120
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0030014 - CCR4-NOT complex (cellular component)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR039515 - NOT4, modified RING finger, HC subclass (C4C4-type)
IPR039780 - CCR4-NOT transcription complex subunit 4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057903.1 suppressor protein SRP40 isoform X2 [Cucumis melo var. makuwa]2.6e-18694.57Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDF
        MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRG VKNKKWNEEDNRLDSVVIKTR+DDNLSS+KINMREIGEENDRSVHHHSD+
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDF

Query:  SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSCGD
        SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSIT  EEEEEEEGDDDCLDDWEAIADALAATDKQ D+CSESSPRGNVVSQLDSCGD
Subjt:  SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSCGD

Query:  SRNELGVGDGDSSVERGRIAQRASINCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLC
         RNELGVGDGDS+VERGRI QRAS+NCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGG+PWACGGV+PVP SCPICFEDLDLTDSSFLPCFCGFRLC
Subjt:  SRNELGVGDGDSSVERGRIAQRASINCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLC

Query:  LFCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISR
        LFCHKRILEEDGRCPGCRKPYDRDPADNETN+  GSPT PLARSCSMISR
Subjt:  LFCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISR

TYJ98591.1 suppressor protein SRP40 isoform X2 [Cucumis melo var. makuwa]9.8e-18694.56Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDF
        MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRG VKNKKWNEEDNRLDSVVIKTR+DDNLSS+KINMREIGEENDRSVHHHSD+
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDF

Query:  SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSCGD
        SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSIT  EEEEEEEGDDDCLDDWEAIADALAATDKQ D+CSESSPRGNVVSQLDSCGD
Subjt:  SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSCGD

Query:  SRNELGVGDGDSSVERGRIAQRASINCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLC
         RNELGVGDGDS+VERGRI QRAS+NCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGG+PWACGGV+PVP SCPICFEDLDLTDSSFLPCFCGFRLC
Subjt:  SRNELGVGDGDSSVERGRIAQRASINCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLC

Query:  LFCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMIS
        LFCHKRILEEDGRCPGCRKPYDRDPADNETN+  GSPT PLARSCSMIS
Subjt:  LFCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMIS

XP_004138290.2 uncharacterized protein LOC101211244 [Cucumis sativus]4.4e-18694.3Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDF
        MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRG VKNKKWNEEDNRLDSVVIKTR+DD+LSS+KINMREIGEENDRSVHHHSD+
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDF

Query:  SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSCGD
        SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSIT  EEEEEEEGDDDCLDDWEAIADALAATDKQHD+CSESSPRGNV+SQLDSCGD
Subjt:  SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSCGD

Query:  SRNELGVGDGDSSVERGRIAQRASINCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLC
         RNELGVGDGDSSVERGRI QRAS+NCRAWRPDDAFRPQSLPTLSKQLSLP TDRRFGCGG+ WACGGV+PVP SCPICFEDLDLTDSSFLPCFCGFRLC
Subjt:  SRNELGVGDGDSSVERGRIAQRASINCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLC

Query:  LFCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISRS
        LFCHKRILEEDGRCPGCRKPYDRDPADNETNV  GSPT PLARSCSMISRS
Subjt:  LFCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISRS

XP_008453149.1 PREDICTED: uncharacterized protein LOC103493947 [Cucumis melo]8.9e-18794.59Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDF
        MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRG VKNKKWNEEDNRLDSVVIKTR+DDNLSS+KINMREIGEENDRSVHHHSD+
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDF

Query:  SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSCGD
        SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSIT  EEEEEEEGDDDCLDDWEAIADALAATDKQ D+CSESSPRGNVVSQLDSCGD
Subjt:  SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSCGD

Query:  SRNELGVGDGDSSVERGRIAQRASINCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLC
         RNELGVGDGDS+VERGRI QRAS+NCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGG+PWACGGV+PVP SCPICFEDLDLTDSSFLPCFCGFRLC
Subjt:  SRNELGVGDGDSSVERGRIAQRASINCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLC

Query:  LFCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISRS
        LFCHKRILEEDGRCPGCRKPYDRDPADNETN+  GSPT PLARSCSMISRS
Subjt:  LFCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISRS

XP_038878939.1 uncharacterized protein LOC120071026 [Benincasa hispida]8.3e-18594.03Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDF
        MVTDSIANASISLAPNARDLPLPKKKRV+NSKLKQSKLDVRREQWLSRG VKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMR+IGEENDRSVH HSDF
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDF

Query:  SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSCGD
        SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSIT  EEEEEEEGDDDCLDDWEAIADALAATDKQHD+CSESSPRGNVVSQLDSCGD
Subjt:  SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSCGD

Query:  SRNELGVGDGDSSVERGRIAQRASINCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGC-GGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRL
        SRNELGVGDGDS V+RGRI QRAS+NCRAWRPDDAFRPQSLP LSKQLSLPNTDRRFGC GGIPW CGGV+PVP SCPICFEDLDLTDSSFLPCFCGFRL
Subjt:  SRNELGVGDGDSSVERGRIAQRASINCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGC-GGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRL

Query:  CLFCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISRS
        CLFCHKRI+EEDGRCPGCRKPYDRDPAD+ETNV GGSP F LARSCSMISRS
Subjt:  CLFCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISRS

TrEMBL top hitse value%identityAlignment
A0A1S3BVJ1 uncharacterized protein LOC1034939474.3e-18794.59Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDF
        MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRG VKNKKWNEEDNRLDSVVIKTR+DDNLSS+KINMREIGEENDRSVHHHSD+
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDF

Query:  SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSCGD
        SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSIT  EEEEEEEGDDDCLDDWEAIADALAATDKQ D+CSESSPRGNVVSQLDSCGD
Subjt:  SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSCGD

Query:  SRNELGVGDGDSSVERGRIAQRASINCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLC
         RNELGVGDGDS+VERGRI QRAS+NCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGG+PWACGGV+PVP SCPICFEDLDLTDSSFLPCFCGFRLC
Subjt:  SRNELGVGDGDSSVERGRIAQRASINCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLC

Query:  LFCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISRS
        LFCHKRILEEDGRCPGCRKPYDRDPADNETN+  GSPT PLARSCSMISRS
Subjt:  LFCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISRS

A0A5A7UPV5 Suppressor protein SRP40 isoform X21.2e-18694.57Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDF
        MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRG VKNKKWNEEDNRLDSVVIKTR+DDNLSS+KINMREIGEENDRSVHHHSD+
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDF

Query:  SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSCGD
        SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSIT  EEEEEEEGDDDCLDDWEAIADALAATDKQ D+CSESSPRGNVVSQLDSCGD
Subjt:  SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSCGD

Query:  SRNELGVGDGDSSVERGRIAQRASINCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLC
         RNELGVGDGDS+VERGRI QRAS+NCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGG+PWACGGV+PVP SCPICFEDLDLTDSSFLPCFCGFRLC
Subjt:  SRNELGVGDGDSSVERGRIAQRASINCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLC

Query:  LFCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISR
        LFCHKRILEEDGRCPGCRKPYDRDPADNETN+  GSPT PLARSCSMISR
Subjt:  LFCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISR

A0A5D3BIS7 Suppressor protein SRP40 isoform X24.7e-18694.56Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDF
        MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRG VKNKKWNEEDNRLDSVVIKTR+DDNLSS+KINMREIGEENDRSVHHHSD+
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDF

Query:  SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSCGD
        SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSIT  EEEEEEEGDDDCLDDWEAIADALAATDKQ D+CSESSPRGNVVSQLDSCGD
Subjt:  SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSCGD

Query:  SRNELGVGDGDSSVERGRIAQRASINCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLC
         RNELGVGDGDS+VERGRI QRAS+NCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGG+PWACGGV+PVP SCPICFEDLDLTDSSFLPCFCGFRLC
Subjt:  SRNELGVGDGDSSVERGRIAQRASINCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLC

Query:  LFCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMIS
        LFCHKRILEEDGRCPGCRKPYDRDPADNETN+  GSPT PLARSCSMIS
Subjt:  LFCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMIS

A0A6J1C357 uncharacterized protein LOC1110070163.8e-17589.74Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDF
        MVTDSI NASISLAP+ARDLPLPKKKRV+NSKLKQSKLDVRREQWLSRG VKNKKWNEEDNRLDSVVIKT +DDNLSSKKINMREIG +N  SVHH SDF
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDF

Query:  SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSCGD
        S+SPSNSPPSL SSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSIT      EEEGDDD LDDWEAIADALAATDKQHD+CSESSPRG+ VSQLDSCGD
Subjt:  SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSCGD

Query:  SRNELGVGDGDSSVERGRIAQRASINCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLC
        SRNELGVGDGDS +E GRIAQRA ++CRAWRPDDAFRPQSLPTLSKQLSLPNTDRR+GCGGIPWACGGVM VP SCPICFEDLDLTDSSFLPCFCGFRLC
Subjt:  SRNELGVGDGDSSVERGRIAQRASINCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLC

Query:  LFCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISRS
        LFCHKRILEEDGRCPGCRKPY+ DPAD+ETNVHGGSPT PLARSCSMISRS
Subjt:  LFCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISRS

A0A6J1JM47 uncharacterized protein LOC1114856371.9e-17488.89Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDF
        MVTDSIANASISLAPNARDLPL KK+R RNSKLKQSKLDVRREQWLSRG +KNKKWNEEDNRLDS V+KT EDDNLSSKKIN REIGEE+DRSVHHHSD 
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDF

Query:  SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSCGD
        S+SPSNSPPS+GSSILGGNDSG HFTGSSSSSSCRSSSSGCRSGSITEEEE+EE   DDDCL+DWEA AD L ATDKQHD+CSESSPRG+VVSQL SCGD
Subjt:  SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSCGD

Query:  SRNELGVGDGDSSVERGRIAQRASINCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLC
        SRNELGVGDGDSS+E GRIA+RAS+N RAWRPDDA RPQSLPTLSKQLSLPNTDRRFGCG +PWACGGV+PVP SCPICFEDLDLTDS+FLPC CGFRLC
Subjt:  SRNELGVGDGDSSVERGRIAQRASINCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLC

Query:  LFCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISRS
        LFCHKRILEEDGRCPGCRKPYDRDPADNETN H GSPTFPLARSCSMISRS
Subjt:  LFCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISRS

SwissProt top hitse value%identityAlignment
O95628 CCR4-NOT transcription complex subunit 46.1e-1352.73Show/hide
Query:  PISCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRI-LEEDGRCPGCRKPYDRDPA
        P+ CP+C E L++ D +F PC CG+++C FC  RI  +E+G CP CRKPY  DPA
Subjt:  PISCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRI-LEEDGRCPGCRKPYDRDPA

P34909 General negative regulator of transcription subunit 43.7e-1050Show/hide
Query:  CPICFEDLDLTDSSFLPCFCGFRLCLFCHKRIL---EEDGRCPGCRKPYD
        CP+C E +D+TD +F PC CG+++C FC+  I    E +GRCP CR+ YD
Subjt:  CPICFEDLDLTDSSFLPCFCGFRLCLFCHKRIL---EEDGRCPGCRKPYD

Q09818 Putative general negative regulator of transcription C16C9.04c1.1e-0948Show/hide
Query:  CPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEE-DGRCPGCRKPYDRD
        CP+C E++D++D +F PC CG+R+C FC   I E+ +GRCP CR+ Y  +
Subjt:  CPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEE-DGRCPGCRKPYDRD

Q8BT14 CCR4-NOT transcription complex subunit 46.1e-1352.73Show/hide
Query:  PISCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRI-LEEDGRCPGCRKPYDRDPA
        P+ CP+C E L++ D +F PC CG+++C FC  RI  +E+G CP CRKPY  DPA
Subjt:  PISCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRI-LEEDGRCPGCRKPYDRDPA

Arabidopsis top hitse value%identityAlignment
AT1G74870.1 RING/U-box superfamily protein1.3e-1529.61Show/hide
Query:  KKRVRN--SKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDFSDSPSNSPPSLGSSILGGNDSG
        KKR  N   KLKQ K+D RR+QW+S+    N    E   RL S++ K  +     + +I+  +  E+++  +   S F+ SP        +S+L   DS 
Subjt:  KKRVRN--SKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDFSDSPSNSPPSLGSSILGGNDSG

Query:  PHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSCGDSRNELGVGDGDSSVERGRIAQR
                     S    C S  +TEEEEE      DD  D+W+   DAL + +  ++  S       +V++     D   E      D+S    +  Q 
Subjt:  PHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSCGDSRNELGVGDGDSSVERGRIAQR

Query:  ASINCRAWRPDDAFRPQSLPTL---SKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRK
        A+             P +  T+   S +    N++++ G G               CPIC E +D TD  F PC CGFR+CLFCH +I E + RCP CRK
Subjt:  ASINCRAWRPDDAFRPQSLPTL---SKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRK

Query:  PYDR
         Y +
Subjt:  PYDR

AT3G45630.1 RNA binding (RRM/RBD/RNP motifs) family protein2.6e-1142.86Show/hide
Query:  SCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRIL------EEDGRCPGCRKPYDRD
        +CP+C E++DLTD    PC CG+++C++C   I+      + +GRCP CR PYD++
Subjt:  SCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRIL------EEDGRCPGCRKPYDRD

AT3G48070.1 RING/U-box superfamily protein3.5e-6445.58Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIG------EENDRSV
        M++DSI NAS + AP ARD    KK+  R++KLKQSKL +RREQWLS+  + NK   EE             +  + S+K + R++       +E++   
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIG------EENDRSV

Query:  HHHSDFSDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQ
        H H  F +S SNSP    +SIL G +S P+F+ SSS     S S G  SG+ITEEE+ +    DD CLDDWEAIADALAA D++H++  E+ P       
Subjt:  HHHSDFSDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQ

Query:  LDSC---GDSRNELGVGDGDSSVERGRI--AQRASINCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSS
         +SC    D +    +G  D  +   +    +R   + +AWRPDD  RPQ LP L KQ S P  +  F           V  VP SCPIC+EDLDLTDS+
Subjt:  LDSC---GDSRNELGVGDGDSSVERGRI--AQRASINCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSS

Query:  FLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISRS
        FLPC CGFRLCLFCHK I + DGRCPGCRKPY+R+    E +V GG  T  LARS SM  RS
Subjt:  FLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISRS

AT3G48070.2 RING/U-box superfamily protein1.0e-6345.43Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIG------EENDRSV
        M++DSI NAS + AP ARD    KK+  R++KLKQSKL +RREQWLS+  + NK   EE             +  + S+K + R++       +E++   
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIG------EENDRSV

Query:  HHHSDFSDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQ
        H H  F +S SNSP    +SIL G +S P+F+ SSS     S S G  SG+ITEEE+ +    DD CLDDWEAIADALAA D++H++  E+ P       
Subjt:  HHHSDFSDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQ

Query:  LDSC---GDSRNELGVGDGDSSVERGRI--AQRASINCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSS
         +SC    D +    +G  D  +   +    +R   + +AWRPDD  RPQ LP L KQ S P  +  F           V  VP SCPIC+EDLDLTDS+
Subjt:  LDSC---GDSRNELGVGDGDSSVERGRI--AQRASINCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSS

Query:  FLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISR
        FLPC CGFRLCLFCHK I + DGRCPGCRKPY+R+    E +V GG  T  LARS SM  R
Subjt:  FLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISR

AT5G62910.1 RING/U-box superfamily protein7.0e-6546.91Show/hide
Query:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDF
        M+TDSI NAS + AP  RD    KK+  +++K+KQ+KL +RREQWLS+  V NK+  EE +     V ++++  + SS K+  RE       ++ HH  F
Subjt:  MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDF

Query:  SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATD--KQHDRCSESSPRGNVVSQLDS-
         +SPSNS        +GG  S  +F+G SS SS  SSSSG  SG+ITEEE  +++  DD C+DDWEA+ADALAA +  ++  R  ES      V Q  S 
Subjt:  SDSPSNSPPSLGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATD--KQHDRCSESSPRGNVVSQLDS-

Query:  -CGDSRNELG--VGDGDSSVERGRIAQRASINCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCF
         C  S ++    VG  D   E  R++ R   + RAWR DD  RPQ LP L+KQLS P  D+RF            + +P SCPIC+EDLDLTDS+FLPC 
Subjt:  -CGDSRNELG--VGDGDSSVERGRIAQRASINCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCF

Query:  CGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISR
        CGFRLCLFCHK I + DGRCPGCRKPY+R+    ET++ GG  T  LARS SM  +
Subjt:  CGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNVHGGSPTFPLARSCSMISR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTACTGATTCGATCGCCAATGCTTCAATTTCTTTGGCCCCAAACGCCAGGGATTTGCCCCTGCCCAAGAAGAAGAGGGTCAGGAATTCCAAATTGAAGCAGTCTAA
GCTTGACGTTCGTCGGGAACAATGGCTTTCTCGAGGTGTTGTAAAGAACAAAAAATGGAACGAAGAAGACAATCGGCTTGATTCAGTGGTCATTAAAACGAGGGAAGATG
ATAACCTTTCCTCCAAAAAAATAAATATGAGGGAAATAGGAGAAGAGAACGACAGATCGGTCCACCACCATAGCGATTTTTCGGACTCACCGTCTAATAGCCCCCCTAGT
CTTGGCAGTAGTATCTTGGGTGGAAATGATTCGGGTCCTCATTTTACTGGGAGTAGCAGTAGTAGTAGCTGCCGTAGCAGCTCTAGTGGTTGTCGCTCGGGGAGTATAAC
GGAGGAGGAGGAAGAAGAAGAAGAAGAAGGAGATGATGACTGCTTGGATGATTGGGAGGCTATTGCCGATGCCCTAGCCGCCACTGACAAGCAACATGATCGATGTTCCG
AGTCTTCCCCTAGAGGCAATGTTGTTTCTCAATTGGATTCTTGTGGAGACAGCAGAAATGAGTTGGGTGTAGGAGATGGTGACTCGAGTGTTGAGCGTGGGAGAATTGCG
CAGAGGGCTTCGATAAATTGCCGAGCATGGAGGCCTGATGATGCCTTTCGTCCTCAGAGTTTGCCCACGTTATCGAAGCAGCTTAGTTTACCGAATACAGACCGTCGTTT
TGGATGTGGAGGCATCCCTTGGGCCTGTGGTGGTGTTATGCCTGTGCCTATATCTTGTCCAATTTGCTTTGAAGACTTGGACCTTACAGACTCAAGTTTTTTACCTTGTT
TCTGTGGATTCCGGCTATGCCTTTTCTGTCATAAGAGGATTCTTGAAGAAGATGGGCGCTGTCCTGGCTGCAGGAAGCCATATGATCGTGATCCTGCCGACAATGAGACA
AATGTACATGGTGGCAGCCCAACGTTCCCATTGGCCCGTTCTTGTAGCATGATTTCAAGGTCTTAG
mRNA sequenceShow/hide mRNA sequence
AAAAGAGCGAGCGAAGCAGAGGAGTTTCCGTTATCCATTCTCTCTCTCTCTTTCTCTTCCCCGAAGATCTTCTCTCTCCCGGAAAAAATATCCACACAAATTAGGGTTTC
TTTGTGACCTTCGTTCCTTCAATTCGATTTCAACTCTTCAATCATGGTTACTGATTCGATCGCCAATGCTTCAATTTCTTTGGCCCCAAACGCCAGGGATTTGCCCCTGC
CCAAGAAGAAGAGGGTCAGGAATTCCAAATTGAAGCAGTCTAAGCTTGACGTTCGTCGGGAACAATGGCTTTCTCGAGGTGTTGTAAAGAACAAAAAATGGAACGAAGAA
GACAATCGGCTTGATTCAGTGGTCATTAAAACGAGGGAAGATGATAACCTTTCCTCCAAAAAAATAAATATGAGGGAAATAGGAGAAGAGAACGACAGATCGGTCCACCA
CCATAGCGATTTTTCGGACTCACCGTCTAATAGCCCCCCTAGTCTTGGCAGTAGTATCTTGGGTGGAAATGATTCGGGTCCTCATTTTACTGGGAGTAGCAGTAGTAGTA
GCTGCCGTAGCAGCTCTAGTGGTTGTCGCTCGGGGAGTATAACGGAGGAGGAGGAAGAAGAAGAAGAAGAAGGAGATGATGACTGCTTGGATGATTGGGAGGCTATTGCC
GATGCCCTAGCCGCCACTGACAAGCAACATGATCGATGTTCCGAGTCTTCCCCTAGAGGCAATGTTGTTTCTCAATTGGATTCTTGTGGAGACAGCAGAAATGAGTTGGG
TGTAGGAGATGGTGACTCGAGTGTTGAGCGTGGGAGAATTGCGCAGAGGGCTTCGATAAATTGCCGAGCATGGAGGCCTGATGATGCCTTTCGTCCTCAGAGTTTGCCCA
CGTTATCGAAGCAGCTTAGTTTACCGAATACAGACCGTCGTTTTGGATGTGGAGGCATCCCTTGGGCCTGTGGTGGTGTTATGCCTGTGCCTATATCTTGTCCAATTTGC
TTTGAAGACTTGGACCTTACAGACTCAAGTTTTTTACCTTGTTTCTGTGGATTCCGGCTATGCCTTTTCTGTCATAAGAGGATTCTTGAAGAAGATGGGCGCTGTCCTGG
CTGCAGGAAGCCATATGATCGTGATCCTGCCGACAATGAGACAAATGTACATGGTGGCAGCCCAACGTTCCCATTGGCCCGTTCTTGTAGCATGATTTCAAGGTCTTAGG
TAGTGTTCAGTTTCTGTGAGTTAATGTACGTTGGTCTCACTTTCTTTTTTTCCTTTTGTTCCTGCGTCTCTTGGGTATTATGGTAGTCTTGGGCTCTGATTTTCATAGTA
ATAGAAGTGGCATTTGGGTGTTGAAGTATGATTATGAGATTGAGAACCTTTAAACTGAACTGTTTCGTACATGAGTGTGGTTCTTATCTTATCGTACATTTGCCAATGTA
GAGGACTTATTTCGTACTTAATATGTGAATAGACGAGGTGGTATAGAAATGAATACATGGAATAATGATACAACATTTGTTTTTTCCA
Protein sequenceShow/hide protein sequence
MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGVVKNKKWNEEDNRLDSVVIKTREDDNLSSKKINMREIGEENDRSVHHHSDFSDSPSNSPPS
LGSSILGGNDSGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEEEGDDDCLDDWEAIADALAATDKQHDRCSESSPRGNVVSQLDSCGDSRNELGVGDGDSSVERGRIA
QRASINCRAWRPDDAFRPQSLPTLSKQLSLPNTDRRFGCGGIPWACGGVMPVPISCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNET
NVHGGSPTFPLARSCSMISRS