; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi06G015270 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G015270
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionsuccinate dehydrogenase subunit 7B, mitochondrial-like
Genome locationchr06:25658395..25662626
RNA-Seq ExpressionLsi06G015270
SyntenyLsi06G015270
Gene Ontology termsGO:0005749 - mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) (cellular component)
GO:0043495 - protein membrane anchor (molecular function)
InterPro domainsIPR034573 - Succinate dehydrogenase subunit 7, mitochondrial


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587488.1 Succinate dehydrogenase subunit 7B, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]3.8e-4293Show/hide
Query:  MAFFLNKTTLASHFRSQSQVDPSSLLRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGGCYEIYVKATMREEARQAKTGSGST
        MAF LNKT LAS FRSQSQVDPSSL RRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIK+IGDVLTIVVVAG CYEIYVKATMREEARQAKT SGST
Subjt:  MAFFLNKTTLASHFRSQSQVDPSSLLRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGGCYEIYVKATMREEARQAKTGSGST

XP_022135509.1 succinate dehydrogenase subunit 7B, mitochondrial-like [Momordica charantia]2.0e-4393Show/hide
Query:  MAFFLNKTTLASHFRSQSQVDPSSLLRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGGCYEIYVKATMREEARQAKTGSGST
        MAFFLN+TTLASHFRSQSQ DPSSL RRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKR+GD+LTIVVVAG CYEIYVKATMREEARQAKT SGST
Subjt:  MAFFLNKTTLASHFRSQSQVDPSSLLRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGGCYEIYVKATMREEARQAKTGSGST

XP_022969157.1 succinate dehydrogenase subunit 7A, mitochondrial-like [Cucurbita maxima]1.7e-4292Show/hide
Query:  MAFFLNKTTLASHFRSQSQVDPSSLLRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGGCYEIYVKATMREEARQAKTGSGST
        MAF LNKTTLASHFRSQSQ DPS+L RRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIK+IGDVLTIVVVAG CYEIYV+ATMREEARQAKT SGST
Subjt:  MAFFLNKTTLASHFRSQSQVDPSSLLRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGGCYEIYVKATMREEARQAKTGSGST

XP_023529214.1 succinate dehydrogenase subunit 7B, mitochondrial-like [Cucurbita pepo subsp. pepo]3.4e-4394Show/hide
Query:  MAFFLNKTTLASHFRSQSQVDPSSLLRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGGCYEIYVKATMREEARQAKTGSGST
        MAF LNKTT ASHFRSQSQVDPSSL RRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIK+IGDVLTIVVVAG CYEIYVKATMREEARQAKT SGST
Subjt:  MAFFLNKTTLASHFRSQSQVDPSSLLRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGGCYEIYVKATMREEARQAKTGSGST

XP_038880267.1 succinate dehydrogenase subunit 7A, mitochondrial-like [Benincasa hispida]2.6e-4394.06Show/hide
Query:  MAFFLNKTTLASHFRSQSQVDPSSLLRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGGCYEIYVKATMREEAR-QAKTGSGS
        MAFFLNKTTLASHFRSQSQVDPSSL RRGFHVEPG REKALLAEDPSLRRF+SHKKGVSRIKRIGD+LTIVVVAGGCYEIYVKATMREEAR QAKT SGS
Subjt:  MAFFLNKTTLASHFRSQSQVDPSSLLRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGGCYEIYVKATMREEAR-QAKTGSGS

Query:  T
        T
Subjt:  T

TrEMBL top hitse value%identityAlignment
A0A0A0LUC0 Uncharacterized protein3.8e-4091.75Show/hide
Query:  MAFFLNKTTLASHFRSQSQVDPSSLLRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGGCYEIYVKATMREEA-RQAKTG
        MAFFLNK+TLASHFRSQSQVDPSSL RRGFHVEPGTREKALLAEDP LRRFRSHKK VSR+KR+GDVLTIVVVAG CYEIYVKATMREEA RQAKTG
Subjt:  MAFFLNKTTLASHFRSQSQVDPSSLLRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGGCYEIYVKATMREEA-RQAKTG

A0A6J1C1M2 succinate dehydrogenase subunit 7B, mitochondrial-like9.8e-4493Show/hide
Query:  MAFFLNKTTLASHFRSQSQVDPSSLLRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGGCYEIYVKATMREEARQAKTGSGST
        MAFFLN+TTLASHFRSQSQ DPSSL RRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKR+GD+LTIVVVAG CYEIYVKATMREEARQAKT SGST
Subjt:  MAFFLNKTTLASHFRSQSQVDPSSLLRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGGCYEIYVKATMREEARQAKTGSGST

A0A6J1E5D6 succinate dehydrogenase subunit 7B, mitochondrial-like5.0e-4088Show/hide
Query:  MAFFLNKTTLASHFRSQSQVDPSSLLRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGGCYEIYVKATMREEARQAKTGSGST
        MAF L KT+LASHFRSQSQVDPSS  RRGFH+EPGTREKALLAEDPSLRRFRSHKKGV+RIK+IGDVLTIVVVAG CYEIYVKATMREEARQAK  S ST
Subjt:  MAFFLNKTTLASHFRSQSQVDPSSLLRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGGCYEIYVKATMREEARQAKTGSGST

A0A6J1F188 succinate dehydrogenase subunit 7B, mitochondrial-like1.2e-4192Show/hide
Query:  MAFFLNKTTLASHFRSQSQVDPSSLLRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGGCYEIYVKATMREEARQAKTGSGST
        MAF LNKT LAS FRSQSQVDPSSL RRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIK+IGDVLTIVVVAG CYEIYVKATMREEARQA T SGST
Subjt:  MAFFLNKTTLASHFRSQSQVDPSSLLRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGGCYEIYVKATMREEARQAKTGSGST

A0A6J1HVK4 succinate dehydrogenase subunit 7A, mitochondrial-like8.3e-4392Show/hide
Query:  MAFFLNKTTLASHFRSQSQVDPSSLLRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGGCYEIYVKATMREEARQAKTGSGST
        MAF LNKTTLASHFRSQSQ DPS+L RRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIK+IGDVLTIVVVAG CYEIYV+ATMREEARQAKT SGST
Subjt:  MAFFLNKTTLASHFRSQSQVDPSSLLRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGGCYEIYVKATMREEARQAKTGSGST

SwissProt top hitse value%identityAlignment
Q3E870 Succinate dehydrogenase subunit 7B, mitochondrial1.9e-2864Show/hide
Query:  MAFFLNKTTLASHFRSQSQV---DPSSLLRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGGCYEIYVKATMREEARQAKTGS
        MAF LN  +++SH RS S     D  S+ RRGFH+EPGTREKALLAED +L+RF+SHKK V ++KRIGDVLT+VVVAG CYEIYVKA M++EA  A   S
Subjt:  MAFFLNKTTLASHFRSQSQV---DPSSLLRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGGCYEIYVKATMREEARQAKTGS

Q6H611 Succinate dehydrogenase subunit 7, mitochondrial3.1e-1053.45Show/hide
Query:  RRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGGCYEIYVKA
        RRGFHVE G REKALL ED +L+RF+S+K  V ++ ++G++LT VV+    YEI   A
Subjt:  RRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGGCYEIYVKA

Q9C5E8 Succinate dehydrogenase subunit 7A, mitochondrial6.8e-2668.42Show/hide
Query:  MAFFLNKTTLASHFRSQSQVDPSSLL--RRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGGCYEIYVKATMREEARQA
        MAF LN T+++SH RS SQ    +L   RRGFHVE G REKALLAED SLRRF+SHKKGV R+KRIGDVLT+VVVAG CYEIY +  MR+EA+ A
Subjt:  MAFFLNKTTLASHFRSQSQVDPSSLL--RRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGGCYEIYVKATMREEARQA

Arabidopsis top hitse value%identityAlignment
AT3G47833.1 unknown protein4.8e-2768.42Show/hide
Query:  MAFFLNKTTLASHFRSQSQVDPSSLL--RRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGGCYEIYVKATMREEARQA
        MAF LN T+++SH RS SQ    +L   RRGFHVE G REKALLAED SLRRF+SHKKGV R+KRIGDVLT+VVVAG CYEIY +  MR+EA+ A
Subjt:  MAFFLNKTTLASHFRSQSQVDPSSLL--RRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGGCYEIYVKATMREEARQA

AT5G62575.1 unknown protein1.0e-2964.65Show/hide
Query:  MAFFLNKTTLASHFRSQSQV--DPSSLLRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGGCYEIYVKATMREEARQAKTGS
        MAF LN  +++SH RS S    D  S+ RRGFH+EPGTREKALLAED +L+RF+SHKK V ++KRIGDVLT+VVVAG CYEIYVKA M++EA  A   S
Subjt:  MAFFLNKTTLASHFRSQSQV--DPSSLLRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGGCYEIYVKATMREEARQAKTGS

AT5G62575.2 unknown protein1.4e-2964Show/hide
Query:  MAFFLNKTTLASHFRSQSQV---DPSSLLRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGGCYEIYVKATMREEARQAKTGS
        MAF LN  +++SH RS S     D  S+ RRGFH+EPGTREKALLAED +L+RF+SHKK V ++KRIGDVLT+VVVAG CYEIYVKA M++EA  A   S
Subjt:  MAFFLNKTTLASHFRSQSQV---DPSSLLRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGGCYEIYVKATMREEARQAKTGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTTTTTCTCAACAAAACCACTCTTGCCTCTCATTTCCGATCTCAATCCCAGGTGGATCCTTCCTCACTCTTGCGCCGTGGATTCCACGTCGAACCAGGGACTCG
TGAAAAGGCTTTATTAGCTGAGGACCCTTCTCTAAGGCGGTTCAGATCACACAAGAAAGGTGTTTCTCGAATCAAAAGAATTGGAGATGTCTTGACAATTGTGGTTGTTG
CAGGAGGTTGCTATGAAATCTATGTGAAAGCAACCATGCGAGAAGAAGCTCGGCAGGCAAAGACAGGTAGCGGCAGTACATGA
mRNA sequenceShow/hide mRNA sequence
CCCAGCTTCTCTACGGAGGCGAAAGAGGTCGAAGGCTTTGAAAGCCCACTTTCCTTTTCAGGTTTTAACTTTCACCGCATTTCTTCTCTCTTCTTCCTTCTCCCATATCG
TGCTCCCCAACAATGGCGTTTTTTCTCAACAAAACCACTCTTGCCTCTCATTTCCGATCTCAATCCCAGGTGGATCCTTCCTCACTCTTGCGCCGTGGATTCCACGTCGA
ACCAGGGACTCGTGAAAAGGCTTTATTAGCTGAGGACCCTTCTCTAAGGCGGTTCAGATCACACAAGAAAGGTGTTTCTCGAATCAAAAGAATTGGAGATGTCTTGACAA
TTGTGGTTGTTGCAGGAGGTTGCTATGAAATCTATGTGAAAGCAACCATGCGAGAAGAAGCTCGGCAGGCAAAGACAGGTAGCGGCAGTACATGATGGAATTTGTATCAG
TGGCAATTAAAAATGTCTGGCAAAAGTTTTTAATGCTTTCATTTGTGTGCTTAAATAAAGGTTTTTGAAGCACCAAGTTCCATTTGCCCCATTTCTGGTAGGTTTTAATC
CTCAATAATCTTTTCTTTGTACCCTTCATTTTGTAACATCTTAAGGGATATCAGAGTACATTTCTTTCGTTATGAGCACATTTTATGAAATTGCCTAAAGCTTGAAATAG
AACTTTCATGGTGGGGAAAATATGGGATTTTTAATTTAGAGAAATTGCAAGGAATGTCCAAAATTAGAGGTCCATTTTTATTTATCATGTTACTAAAAGAATTATTTGAA
TTTTTATTACTGCAGATTTTATTAAATTTGGTTAGGTTTAGATTGATAG
Protein sequenceShow/hide protein sequence
MAFFLNKTTLASHFRSQSQVDPSSLLRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGGCYEIYVKATMREEARQAKTGSGST