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Lsi06G015380 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G015380
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionABC transporter domain-containing protein
Genome locationchr06:25739150..25743685
RNA-Seq ExpressionLsi06G015380
SyntenyLsi06G015380
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PPR87595.1 hypothetical protein GOBAR_AA33084 [Gossypium barbadense]2.2e-1237.07Show/hide
Query:  EFDPSPLRHNPSFHTFPRLQNTHSIFFQHKTHMQNPILGPVSGVYWPHNNVIVGLGESKVVGVEDEVVLDREGLSFGFGLECGELNTTKAARFPVLPFGE
        +F    L H P+ HT P LQ+T +I  +HKT M++  + P+ G     ++VI+   E K +G+E EV++  E    G  L   EL++ +  R PV+  G 
Subjt:  EFDPSPLRHNPSFHTFPRLQNTHSIFFQHKTHMQNPILGPVSGVYWPHNNVIVGLGESKVVGVEDEVVLDREGLSFGFGLECGELNTTKAARFPVLPFGE

Query:  DFDGEDGVGAQFGGEK
        DF+GEDG+ A+ G E+
Subjt:  DFDGEDGVGAQFGGEK
RXH79800.1 hypothetical protein DVH24_040947 [Malus domestica]4.5e-0551.92Show/hide
Query:  PLRHNPSFHTFPRLQNTHSIFFQHKTHMQNPILGPVSGVYWPHNNVIVGLGE
        PL H+P+ H  PRLQ+ H+IF  HKT+MQN  + P   +Y   +NVIVGLG+
Subjt:  PLRHNPSFHTFPRLQNTHSIFFQHKTHMQNPILGPVSGVYWPHNNVIVGLGE
TrEMBL top hitse value%identityAlignment
A0A2P5W915 Uncharacterized protein1.1e-1237.07Show/hide
Query:  EFDPSPLRHNPSFHTFPRLQNTHSIFFQHKTHMQNPILGPVSGVYWPHNNVIVGLGESKVVGVEDEVVLDREGLSFGFGLECGELNTTKAARFPVLPFGE
        +F    L H P+ HT P LQ+T +I  +HKT M++  + P+ G     ++VI+   E K +G+E EV++  E    G  L   EL++ +  R PV+  G 
Subjt:  EFDPSPLRHNPSFHTFPRLQNTHSIFFQHKTHMQNPILGPVSGVYWPHNNVIVGLGESKVVGVEDEVVLDREGLSFGFGLECGELNTTKAARFPVLPFGE

Query:  DFDGEDGVGAQFGGEK
        DF+GEDG+ A+ G E+
Subjt:  DFDGEDGVGAQFGGEK
A0A498I9G3 ABC transporter domain-containing protein2.2e-0551.92Show/hide
Query:  PLRHNPSFHTFPRLQNTHSIFFQHKTHMQNPILGPVSGVYWPHNNVIVGLGE
        PL H+P+ H  PRLQ+ H+IF  HKT+MQN  + P   +Y   +NVIVGLG+
Subjt:  PLRHNPSFHTFPRLQNTHSIFFQHKTHMQNPILGPVSGVYWPHNNVIVGLGE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAGTTCTTTACCGAAAGCAAAATCCGATCCTTCATATCACCATACTTACGGTTGTCACGTTGCAGCTCGGATTTCGTCAAGGTTATGCAGGCATACACTTGGCCA
TAATTTAAGATACCAGTTTCATCCAAGCAGCCAAGGAGGATCCGTCCCTTTGGAACATATATTCTACATCTACTTCTTAAATCAGAAAACAGGTTCCAATAGTGTGCTTG
AAGCATCATTGAGAGAATTCGACCCTTCTCCTCTCCGGCATAATCCAAGCTTTCACACCTTCCCAAGACTCCAAAACACTCATTCGATCTTCTTTCAGCATAAAACCCAC
ATGCAAAACCCCATTCTCGGTCCTGTTTCTGGCGTGTACTGGCCTCACAACAATGTCATCGTTGGTCTCGGAGAATCTAAGGTTGTGGGAGTTGAAGATGAGGTTGTTTT
GGACAGAGAAGGACTGAGCTTTGGATTTGGCCTCGAGTGTGGTGAACTGAACACGACCAAAGCCGCGCGATTTCCAGTTCTTCCGTTCGGTGAAGATTTCGATGGCGAAG
ACGGAGTCGGGGCCCAATTTGGAGGTGAGAAAGGTCAAGAGGTCTTGAGCTATGGCGGACTCCGGAACGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTAGTTCTTTACCGAAAGCAAAATCCGATCCTTCATATCACCATACTTACGGTTGTCACGTTGCAGCTCGGATTTCGTCAAGGTTATGCAGGCATACACTTGGCCA
TAATTTAAGATACCAGTTTCATCCAAGCAGCCAAGGAGGATCCGTCCCTTTGGAACATATATTCTACATCTACTTCTTAAATCAGAAAACAGGTTCCAATAGTGTGCTTG
AAGCATCATTGAGAGAATTCGACCCTTCTCCTCTCCGGCATAATCCAAGCTTTCACACCTTCCCAAGACTCCAAAACACTCATTCGATCTTCTTTCAGCATAAAACCCAC
ATGCAAAACCCCATTCTCGGTCCTGTTTCTGGCGTGTACTGGCCTCACAACAATGTCATCGTTGGTCTCGGAGAATCTAAGGTTGTGGGAGTTGAAGATGAGGTTGTTTT
GGACAGAGAAGGACTGAGCTTTGGATTTGGCCTCGAGTGTGGTGAACTGAACACGACCAAAGCCGCGCGATTTCCAGTTCTTCCGTTCGGTGAAGATTTCGATGGCGAAG
ACGGAGTCGGGGCCCAATTTGGAGGTGAGAAAGGTCAAGAGGTCTTGAGCTATGGCGGACTCCGGAACGTTTGA
Protein sequenceShow/hide protein sequence
MGSSLPKAKSDPSYHHTYGCHVAARISSRLCRHTLGHNLRYQFHPSSQGGSVPLEHIFYIYFLNQKTGSNSVLEASLREFDPSPLRHNPSFHTFPRLQNTHSIFFQHKTH
MQNPILGPVSGVYWPHNNVIVGLGESKVVGVEDEVVLDREGLSFGFGLECGELNTTKAARFPVLPFGEDFDGEDGVGAQFGGEKGQEVLSYGGLRNV