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Lsi06G015390 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi06G015390
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr06:25743728..25744858
RNA-Seq ExpressionLsi06G015390
SyntenyLsi06G015390
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON61087.1 hypothetical protein PanWU01x14_148730 [Parasponia andersonii]2.9e-1048.89Show/hide
Query:  LPRTFIEIHSVTQRIVLKFPSPKTSSTTTTPIPIKSANESLPSRSSDDLRPFSELQKSPNASRPPAPLAMNLRCPNPFPPRRSDCGHTAR
        +PR+F+EI  VTQ +VL+FP P  S+T +  +P++ ANESLP  S DDLRP  EL +S N   PP P  + +  P+P PP +SD G +AR
Subjt:  LPRTFIEIHSVTQRIVLKFPSPKTSSTTTTPIPIKSANESLPSRSSDDLRPFSELQKSPNASRPPAPLAMNLRCPNPFPPRRSDCGHTAR
PON93356.1 hypothetical protein TorRG33x02_109270 [Trema orientale]3.2e-0945.74Show/hide
Query:  LPRTFIEIHSVTQRIVLKFPSPKTSSTTT----TPIPIKSANESLPSRSSDDLRPFSELQKSPNASRPPAPLAMNLRCPNPFPPRRSDCGHTAR
        +PR+F+EI  VTQ +VL+FP P +++  T      +P++ ANESLP  S DDLRP  EL +S   S PP P  + +  P+P PP +SD G +AR
Subjt:  LPRTFIEIHSVTQRIVLKFPSPKTSSTTT----TPIPIKSANESLPSRSSDDLRPFSELQKSPNASRPPAPLAMNLRCPNPFPPRRSDCGHTAR
TrEMBL top hitse value%identityAlignment
A0A2P5CJ64 Uncharacterized protein1.4e-1048.89Show/hide
Query:  LPRTFIEIHSVTQRIVLKFPSPKTSSTTTTPIPIKSANESLPSRSSDDLRPFSELQKSPNASRPPAPLAMNLRCPNPFPPRRSDCGHTAR
        +PR+F+EI  VTQ +VL+FP P  S+T +  +P++ ANESLP  S DDLRP  EL +S N   PP P  + +  P+P PP +SD G +AR
Subjt:  LPRTFIEIHSVTQRIVLKFPSPKTSSTTTTPIPIKSANESLPSRSSDDLRPFSELQKSPNASRPPAPLAMNLRCPNPFPPRRSDCGHTAR
A0A2P5F6F2 Uncharacterized protein1.6e-0945.74Show/hide
Query:  LPRTFIEIHSVTQRIVLKFPSPKTSSTTT----TPIPIKSANESLPSRSSDDLRPFSELQKSPNASRPPAPLAMNLRCPNPFPPRRSDCGHTAR
        +PR+F+EI  VTQ +VL+FP P +++  T      +P++ ANESLP  S DDLRP  EL +S   S PP P  + +  P+P PP +SD G +AR
Subjt:  LPRTFIEIHSVTQRIVLKFPSPKTSSTTT----TPIPIKSANESLPSRSSDDLRPFSELQKSPNASRPPAPLAMNLRCPNPFPPRRSDCGHTAR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCAAACAACAATTGTTATGACAAAAGAGGAAAAATCTAACGGAGGAGGTGGCGGCGGCGGCGGTGATGTCAGCAAGCTCAATACACAGCGCACCTTACGCGACGG
CAGAAACATCCTTGGTTCCTCCAGTCTTCAACGGCGCCGGAATCGAAGCGTAACGAGCAGAGAAGTTCCGAAAACCATTGAAATCATCGATATCGTCGTCCAATTCTCCA
ATCTGCCTCGAACCTTCATCGAAATTCATAGCGTAACTCAAAGGATCGTATTGAAATTTCCCAGCCCTAAGACCAGCTCCACCACCACCACTCCGATTCCGATTAAATCG
GCGAATGAAAGTCTTCCATCTCGGTCCAGCGACGATCTCCGACCATTCTCGGAGCTTCAAAAGAGCCCTAACGCCTCTCGCCCACCAGCGCCCCTCGCTATGAACCTGCG
ATGCCCTAATCCGTTCCCACCACGACGGTCCGACTGTGGCCACACGGCGAGATCCAAAGCAAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGAATCAAACAACAATTGTTATGACAAAAGAGGAAAAATCTAACGGAGGAGGTGGCGGCGGCGGCGGTGATGTCAGCAAGCTCAATACACAGCGCACCTTACGCGACGG
CAGAAACATCCTTGGTTCCTCCAGTCTTCAACGGCGCCGGAATCGAAGCGTAACGAGCAGAGAAGTTCCGAAAACCATTGAAATCATCGATATCGTCGTCCAATTCTCCA
ATCTGCCTCGAACCTTCATCGAAATTCATAGCGTAACTCAAAGGATCGTATTGAAATTTCCCAGCCCTAAGACCAGCTCCACCACCACCACTCCGATTCCGATTAAATCG
GCGAATGAAAGTCTTCCATCTCGGTCCAGCGACGATCTCCGACCATTCTCGGAGCTTCAAAAGAGCCCTAACGCCTCTCGCCCACCAGCGCCCCTCGCTATGAACCTGCG
ATGCCCTAATCCGTTCCCACCACGACGGTCCGACTGTGGCCACACGGCGAGATCCAAAGCAAGATAA
Protein sequenceShow/hide protein sequence
MNQTTIVMTKEEKSNGGGGGGGGDVSKLNTQRTLRDGRNILGSSSLQRRRNRSVTSREVPKTIEIIDIVVQFSNLPRTFIEIHSVTQRIVLKFPSPKTSSTTTTPIPIKS
ANESLPSRSSDDLRPFSELQKSPNASRPPAPLAMNLRCPNPFPPRRSDCGHTARSKAR